Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02906 ATGGCTCCACCATACTTAACCAAAAATAATGGTGCATTAGAAGAAATAGGAGAGGTTGTGGATGGTGGTGGAAGTGATAGTAGTAAGAATGAAAAAGAAGCTTTGTGTATAAAGTTAGAAGGATCAAACTTTGTTGCAAATGGAGAACCTTTTCTGCGGGAGGTTCCATCCAACATAGTAGCAACACGGTCGCCATATTCATCGGATGCAAACAACAACAACATCGTTGGTTGCTTCGTGGGCTTTGATGCCACCGAATCTAGGTGCCGCCACGTGGCTCCACTTGGCAAGCTCAAAGACATTAGGTTCATGAGCATATTCAGGTTTAAGGTATGGTGGACAACACATTGGGTTGGAAGCAATGGACACGAAGTGGAGCATGAAACTCAGTTGTTAATGTTGGACAAGAATGACCACTATGGTAGACCCTATGTTCTCCTGCTTCCCATTCTAGAAGGTTCCTTCCGAGCCTCACTTCAACCGGGTTTGGATGATTACGTGGACATGTGCGTTGAGAGTGGATCGACACGTGTCAGTGAATCCACCTTCAGAAGGTGTTTGTATATTCATGCTTCTCATGACCCTTTCCGTTTGGTCAAAGAAGCCATCAAGATCATACGCCTTCACTTGGGAACTTTCAAGCTCCTTGAAGAAAAAACTCCACCAGGTATTGTGGACAAGTTTGGTTGGTGTACATGGGATGCCTTCTACTTGAAGGTACACCCTAAAGGGGTATGGGAAGGTGTGAAAGGCCTTGTAGAGGGAGGGTGCCCTCCGGGTATGGTCTTAATCGACGACGGATGGCAATCAATTTGTCACGACGACGATCCAATCACAGATGAACAAGAAGGCATGAACCGAACATCGGCCGGCGAACAAATGCCATGTAGGCTGATTAAATTCGTAGAGAATTCTAAATTCAGGGACTACAAAGGAATTGTAGACCCTGACCAGAAAGGGATGGGTGCGTTTGTTAGGGACCTAAAGGAAGAATTCAAGAGTGTGGAACATGTTTACGTGTGGCATGCGCTTTGTGGGTATTGGGGTGGGATAAGGCCCAATGTGAAGGGAATGCCTATGTCTAAGGTTGTTGGTCCTAAGATGTCACAAAGTTTGCAAATGACAATGGAGGATCTTGCTGTGGATAAAATTGTGAATAATGGTGTTGGGTTGGTACCACCTCATTTGGTGCATCAATTGTATGAGGGACTTCACTCTCATTTGGAATCTGTGGGGATTGATGGGGTTAAGGTTGATGTTATACATTTGCTTGAGATGCTATGCGAGGAATACGGTGGTCGTGTGGATCTTGCAAAAGCTTATTACAAAGCACTTACAGATTCTGTGAAGAAGCATTTCAAAGGCAATGGAGTCATTGCTAGCATGGAGCATTGCAATGACTTCTTCCTTTTGGGCACCCAAGCCATTTCGCTAGGCCGAGTCGGAGATGATTTTTGGTGTACGGATCCGACGGGCGACCCGAACGGCACATACTGGCTACAAGGTTGTCACATGGTACACTGTGCCTACAACAGCTTATGGATGGGGAATTTCATTCAGCCAGATTGGGACATGTTCCAATCCACTCACCCCTGTGCTGAGTTCCATGCTGCCTCAAGAGCCATCTCTGGTGGACCAATTTATGTTAGTGATTGTGTTTCCAACCATAACTTCAAGTTGCTTAAGACTCTTGTTTTGCCTAACGGCTCTATCTTGAGGTGCCAACATTATGCACTTCCTACTAGAGATTGCTTGTTTATGGATCCATTGCATGATGGCAAAACAATGCTCAAGATTTGGAACCTCAACAAGTACACTGGAGTGTTGGGACTATTCAATTGCCAAGGAGGAGGTTGGTGCCCTGTGACAAGAAGAAACAAGAGTGCCTGTGAATTCTCAAACACAGTGACATGCTTTGCAAGCCCCAAAGACATTGAATGGAACAATGGTAATAATAATTCTAATGCTAATAATAAAAAACCAATTTCCATCAACGGTGTGGAAATTTTTGCAGTTTATCTCTTCAAGGAAAACAAATTGAAGCTAATGAAGAATTCAGACAAATTACAAGTTTCACTTGAACCATTCAGCTTTGAACTAATGACAGTTTCACCAGTTAGGGTGTTATCATCTTATAATTATAATGATAATAATGAGAGGCTAATTCAATTTGCACCAATTGGGTTAGTGAACATGCTTAACTCCGGTGGTGCAATTGAGTCACTTGTGTTTGATGATAAACAAAGCAGGGTCAAAATTGGAATAAAGGGTTGTGGGGAAATGAGAGTGTTTGCATCAAAGAAACCTATTGTTTGTAAGATTAATGGGGTGGATGTGGAATTTGATTATGAGGATAACATGGTTAGGGTTCATGTTCCATGGCCTATTCATGAACCAAAATTGTCAATGCTTGAGTATTTGTTTTGA 2427 0.4306 MAPPYLTKNNGALEEIGEVVDGGGSDSSKNEKEALCIKLEGSNFVANGEPFLREVPSNIVATRSPYSSDANNNNIVGCFVGFDATESRCRHVAPLGKLKDIRFMSIFRFKVWWTTHWVGSNGHEVEHETQLLMLDKNDHYGRPYVLLLPILEGSFRASLQPGLDDYVDMCVESGSTRVSESTFRRCLYIHASHDPFRLVKEAIKIIRLHLGTFKLLEEKTPPGIVDKFGWCTWDAFYLKVHPKGVWEGVKGLVEGGCPPGMVLIDDGWQSICHDDDPITDEQEGMNRTSAGEQMPCRLIKFVENSKFRDYKGIVDPDQKGMGAFVRDLKEEFKSVEHVYVWHALCGYWGGIRPNVKGMPMSKVVGPKMSQSLQMTMEDLAVDKIVNNGVGLVPPHLVHQLYEGLHSHLESVGIDGVKVDVIHLLEMLCEEYGGRVDLAKAYYKALTDSVKKHFKGNGVIASMEHCNDFFLLGTQAISLGRVGDDFWCTDPTGDPNGTYWLQGCHMVHCAYNSLWMGNFIQPDWDMFQSTHPCAEFHAASRAISGGPIYVSDCVSNHNFKLLKTLVLPNGSILRCQHYALPTRDCLFMDPLHDGKTMLKIWNLNKYTGVLGLFNCQGGGWCPVTRRNKSACEFSNTVTCFASPKDIEWNNGNNNSNANNKKPISINGVEIFAVYLFKENKLKLMKNSDKLQVSLEPFSFELMTVSPVRVLSSYNYNDNNERLIQFAPIGLVNMLNSGGAIESLVFDDKQSRVKIGIKGCGEMRVFASKKPIVCKINGVDVEFDYEDNMVRVHVPWPIHEPKLSMLEYLF 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02906 808 Gene3D Aldolase class I 223 566 IPR013785 -
Arst3g02906 808 Pfam Raffinose synthase or seed imbibition protein Sip1 40 790 IPR008811 -
Arst3g02906 808 Pfam Raffinose synthase or seed imbibition protein Sip1 40 790 IPR008811 -
Arst3g02906 808 SUPERFAMILY (Trans)glycosidases 222 575 IPR017853 -
Arst3g02906 808 PANTHER - 39 801 IPR008811 -
Arst3g02906 808 FunFam Probable galactinol--sucrose galactosyltransferase 5 226 567 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02906 Arst-Chr3 42720866 42727349 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02906 1 808 Glycoside Hydrolase AT5G40390 63.004 0.0 1048
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02906 K06617 - gmx:100800308 1271.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g02906 3 42720866 42727349 Arst3g02906 3 42720866 42727349 ECH