Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Arst3g02888 | ATGGATCCAAATCCAACTAACTTCCCAATCCTCTCTTACGTCATGTCTCGTCTCCCTTCTCTGACTCCCAAAACCGCCGCAGATTCCAATAATAACCTTGACGACCTCGAGCAGCCGCCTCCACTCTCCGATGCTGCTGCTGCTTCTTCTGTGGGCCCACTCGGCCCACAATTATTGGGCCAGATGCCCAACCTTGACGACGCTAACCTCCTCGCCTCCATGGGCGGTGCAATCTCCGACGTCGCTCAGGCCCGATCGGTTCTCAATCTAATTGGCGACCGCCCTACTCACGAGGAAGTCGACGCCGCCAGGGCCGACCTGGCTGACCTGGAGGCCAGGCTGTCACGCCAGCTGGAGGAGATCGTTCTGGAGCCCAGGCCCGCTGACGTGGATATCCACACTTGGCGGGCCCGGCAGGCCGAGAGGGAGCTCAAGTGCAGGGAGGAAGCGGAGAAGGAGAGGCGTGTCGTCAAGTCGGTCATACAGCTCGATGAGATGCACGATGCGTACGAGAGGCTTCTTGCTGACGCCGAGAAGCGACTCGTTAGGATCTACGGCGGCGCCGGAGATGCCGCCGATGACACCGGTGTTGCTGCTGCTGGTGATGAGCTGAACGAAGAGGTTGCGGAAATACTGCAGGAAGCTTACGGGAAAGGGATGGAGAGGGTGGATCTTTCTGGCCGGCGGTTGCGGTTGTTGCCGGAGGCGTTTGGGAGGATTTCCGGCCTTGTGGTGCTTGATGCATCCGCCAATCAGCTTTCGACAATTCCCGACTCGATAGCTGGATTACAAAATCTGGAGGAGCTTAATCTATCTTCAAACCTTTTGACATTACTTCCAGATTCAATTGGGTTATTGCAAAAACTGAAATTTCTCAATATCTCTGGAAATAAGCTGAGTGCCCTTCCTGATCCCATCTGTCAGTGCAGGTCATTGGTGGAGCTGGATGTAAGCTTTAACAGTCTGACATATTTGCCAACGAACATTGGATATGAACTGCCAAACTTAAAGAAACTCATGATTCAACTGAACAAGATTCGATCTCTACCGTCATCTATCTGTGAGTTGAAGTCGCTGCGCTATCTGGATGCTCACTTTAATGAGCTACATGGACTTCCCATTGCAATTGGGAGACTCACCAATCTGGAAGTTCTCAACCTGAGCAGTAACTTCAGTGACCTCAAAGAACTACCCGAGACGTTTGGTGATTTGACTAACCTCAAAGAATTAGATCTCAGCAACAATCAAATTCATGCACTTCCTGATACATTTGGTCGCCTTGAAAATTTGACGAAGCTTAACTTGGATCAGAATCCTATTGAATTACCACCAATGGAGATTGTAAATCAAGGCGTCGAGGCTGTAAAAACCTTTATGGCGAAGAGATGGATTGATATATTGCTAGAGGAAGAAAGGAAAAGCAACCAAGAAATGCAAGAGCAAGCACAGAATGGATGGTTAACACGAAGCACGTCGTGGTTGAAGAATGTTTCCGGGAATGTAATTGGGTATCTTGGAACAGTTGGATCACCTATGGCACCCAAATCTCCCAAAGATGCTTATCTTGATCAGCAGCTATGA | 1581 | 0.5009 | MDPNPTNFPILSYVMSRLPSLTPKTAADSNNNLDDLEQPPPLSDAAAASSVGPLGPQLLGQMPNLDDANLLASMGGAISDVAQARSVLNLIGDRPTHEEVDAARADLADLEARLSRQLEEIVLEPRPADVDIHTWRARQAERELKCREEAEKERRVVKSVIQLDEMHDAYERLLADAEKRLVRIYGGAGDAADDTGVAAAGDELNEEVAEILQEAYGKGMERVDLSGRRLRLLPEAFGRISGLVVLDASANQLSTIPDSIAGLQNLEELNLSSNLLTLLPDSIGLLQKLKFLNISGNKLSALPDPICQCRSLVELDVSFNSLTYLPTNIGYELPNLKKLMIQLNKIRSLPSSICELKSLRYLDAHFNELHGLPIAIGRLTNLEVLNLSSNFSDLKELPETFGDLTNLKELDLSNNQIHALPDTFGRLENLTKLNLDQNPIELPPMEIVNQGVEAVKTFMAKRWIDILLEEERKSNQEMQEQAQNGWLTRSTSWLKNVSGNVIGYLGTVGSPMAPKSPKDAYLDQQL | 526 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Arst3g02888 | 526 | SMART | LRR_typ_2 | 310 | 332 | IPR003591 | - | |
| Arst3g02888 | 526 | SMART | LRR_typ_2 | 427 | 450 | IPR003591 | - | |
| Arst3g02888 | 526 | SMART | LRR_typ_2 | 286 | 309 | IPR003591 | - | |
| Arst3g02888 | 526 | SMART | LRR_typ_2 | 379 | 403 | IPR003591 | - | |
| Arst3g02888 | 526 | SMART | LRR_typ_2 | 263 | 285 | IPR003591 | - | |
| Arst3g02888 | 526 | SMART | LRR_typ_2 | 240 | 262 | IPR003591 | - | |
| Arst3g02888 | 526 | SMART | LRR_typ_2 | 333 | 356 | IPR003591 | - | |
| Arst3g02888 | 526 | SMART | LRR_typ_2 | 404 | 426 | IPR003591 | - | |
| Arst3g02888 | 526 | Pfam | Leucine rich repeat | 243 | 299 | IPR001611 | GO:0005515 | |
| Arst3g02888 | 526 | Pfam | Leucine rich repeat | 381 | 440 | IPR001611 | GO:0005515 | |
| Arst3g02888 | 526 | Pfam | Leucine rich repeat | 310 | 369 | IPR001611 | GO:0005515 | |
| Arst3g02888 | 526 | FunFam | Plant intracellular Ras-group-related LRR protein 9 | 142 | 324 | - | - | |
| Arst3g02888 | 526 | Coils | Coil | 100 | 120 | - | - | |
| Arst3g02888 | 526 | SUPERFAMILY | L domain-like | 219 | 445 | - | - | |
| Arst3g02888 | 526 | PRINTS | Leucine-rich repeat signature | 404 | 417 | - | - | |
| Arst3g02888 | 526 | PRINTS | Leucine-rich repeat signature | 289 | 302 | - | - | |
| Arst3g02888 | 526 | ProSiteProfiles | Leucine-rich repeat profile. | 288 | 309 | IPR001611 | GO:0005515 | |
| Arst3g02888 | 526 | Coils | Coil | 160 | 180 | - | - | |
| Arst3g02888 | 526 | SMART | LRR_bac_2 | 309 | 328 | - | - | |
| Arst3g02888 | 526 | SMART | LRR_bac_2 | 263 | 282 | - | - | |
| Arst3g02888 | 526 | SMART | LRR_bac_2 | 379 | 400 | - | - | |
| Arst3g02888 | 526 | SMART | LRR_bac_2 | 333 | 352 | - | - | |
| Arst3g02888 | 526 | SMART | LRR_bac_2 | 356 | 375 | - | - | |
| Arst3g02888 | 526 | SMART | LRR_bac_2 | 404 | 423 | - | - | |
| Arst3g02888 | 526 | SMART | LRR_bac_2 | 240 | 259 | - | - | |
| Arst3g02888 | 526 | SMART | LRR_bac_2 | 286 | 305 | - | - | |
| Arst3g02888 | 526 | MobiDBLite | consensus disorder prediction | 22 | 50 | - | - | |
| Arst3g02888 | 526 | MobiDBLite | consensus disorder prediction | 22 | 37 | - | - | |
| Arst3g02888 | 526 | Coils | Coil | 464 | 484 | - | - | |
| Arst3g02888 | 526 | PANTHER | - | 222 | 390 | - | - | |
| Arst3g02888 | 526 | ProSiteProfiles | Leucine-rich repeat profile. | 406 | 427 | IPR001611 | GO:0005515 | |
| Arst3g02888 | 526 | FunFam | Plant intracellular Ras-group-related LRR protein 2 | 328 | 501 | - | - | |
| Arst3g02888 | 526 | Gene3D | Ribonuclease Inhibitor | 203 | 461 | IPR032675 | - | |
| Arst3g02888 | 526 | ProSiteProfiles | Leucine-rich repeat profile. | 265 | 286 | IPR001611 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Arst3g02888 | Arst-Chr3 | 42528615 | 42532377 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Arst3g02888 | 251 | 443 | Receptor kinase-like Gene Family | AT5G25910 | 33.014 | 3.09e-09 | 57.8 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Arst3g02888 | - | - | gmx:100803823 | 745.732 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Arst3g02888 | 3 | 42528615 | 42532377 | Arst3g02888 | 3 | 42528615 | 42532377 | ECH |