Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02827 ATGGGTGGATCAAGTTCTAAAAGAAGTAGTTCTAGGCGTTCAACCACGAGGTCGAATTCAAATTCATGGTACCCTCAATATCAAACACCTTCTTATGCACAAAACCCTCAGTATCATGAGCCTCAGGGTTATCAATATCATGGCAATACATCTCAAAGCTATGGTGGCAGCGGGAGTGGCCGTCCCGCGGAGCAGAAGAAGAGGTTGGATAGGAAGTATTCGAGGATAGATGACAATTATCATAGCTTGGAGCAGGTAACCGATGCTCTGGCAGGTGCTGGCCTAGAATCTTCCAACCTCATTGTTGGTATTGATTTTACAAAGAGCAACGAGTGGACAGGTGGAAGATCATTTCAAAGGAGATGCTTGCATCACATTGGTCACGAGCAAAATCCATACGAACAAGCTATATCTATCATTGGGAAAACATTGTCTTCCTTCGATGAGGATAACCTGATTCCTTGTTTTGGGTTCGGTGATGCATCGACACATGACCAAGAAGTTTTTAGTTTCTACCCGGATGATAGATTTTGTCACGGATTTGAAGAAGTGTTGTCACGATATCGGGAATTAGTCCCTCAATTAAGGCTTGCAGGACCGACATCATTTGCCCCAATTATTGAGATGGCAATCTCCATTGTTGAGCAAAGTGGAGGCCAGTACCATGTCTTATTGATCATAGCTGATGGACAGGTAACAAGAAGTGTTGATACCGAGCGTGGTCAATTGAGTGCACAAGAAAAGAAAACGGTAGAAGCTATCGTGAAAGCAAGCGAATATCCCTTATCGATCATTCTGGTTGGAGTTGGCGACGGGCCGTGGGACATGATGAGAGAATTTGATGATAACATCCCTGCCCGAGCATTTGATAATTTCCAGTTTGTGAATTTTACGGAAATAATGTCAAAGAACATGGATCGATCACGCAAGGAAGCAGAGTTTGCACTTGCTGCTTTGATGGAAATACCCTCTCAGTACAAGGCAACACTAGAACTTAACATATTGGGTGCTCGCAGAGGGAAAGATATAGACAGGATTGCTCTCCCACCACCACTATATGGTTCCAATACGCCATCTTATAACTCTCCGAAAGCTTCGCGACAAAACAGTTTCCGCCCCACTGCGCCATCTCACAGTCAAAGACACGATGTTTTTCCCGCACATTCTCCTGCCACGTCTGCATCTGATAATCAGCTTTGTCCCATTTGTCTTACTGATCCCAAGAACATGGCATTTGGTTGTGGGCATCAGACATGCTGTGAATGTGGACAAGAGCTTGAATTATGCCCCATATGCAGGAGTACTATTGACACAAGAATTAAACTTTATTAA 1332 0.4399 MGGSSSKRSSSRRSTTRSNSNSWYPQYQTPSYAQNPQYHEPQGYQYHGNTSQSYGGSGSGRPAEQKKRLDRKYSRIDDNYHSLEQVTDALAGAGLESSNLIVGIDFTKSNEWTGGRSFQRRCLHHIGHEQNPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEVFSFYPDDRFCHGFEEVLSRYRELVPQLRLAGPTSFAPIIEMAISIVEQSGGQYHVLLIIADGQVTRSVDTERGQLSAQEKKTVEAIVKASEYPLSIILVGVGDGPWDMMREFDDNIPARAFDNFQFVNFTEIMSKNMDRSRKEAEFALAALMEIPSQYKATLELNILGARRGKDIDRIALPPPLYGSNTPSYNSPKASRQNSFRPTAPSHSQRHDVFPAHSPATSASDNQLCPICLTDPKNMAFGCGHQTCCECGQELELCPICRSTIDTRIKLY 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02827 443 MobiDBLite consensus disorder prediction 1 69 - -
Arst3g02827 443 SUPERFAMILY vWA-like 98 281 IPR036465 -
Arst3g02827 443 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 378 443 IPR013083 -
Arst3g02827 443 MobiDBLite consensus disorder prediction 1 59 - -
Arst3g02827 443 MobiDBLite consensus disorder prediction 354 377 - -
Arst3g02827 443 SUPERFAMILY RING/U-box 391 439 - -
Arst3g02827 443 MobiDBLite consensus disorder prediction 348 394 - -
Arst3g02827 443 SMART VWA_4 97 300 IPR002035 -
Arst3g02827 443 Pfam Copine 122 335 IPR010734 -
Arst3g02827 443 ProSiteProfiles Zinc finger RING-type profile. 400 433 IPR001841 -
Arst3g02827 443 PANTHER COPINE FAMILY PROTEIN 1 10 420 - -
Arst3g02827 443 Pfam Zinc finger, C3HC4 type (RING finger) 397 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02827 Arst-Chr3 42184036 42189015 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02827 K16280 - gmx:100809850 706.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g02827 3 42184036 42189015 Arst3g02827 3 42184036 42189015 ECH