Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02789 ATGCTCAAATCAACATTCACTCCCATTTTCTGGGCACTTGTCCCAAAACCCATGTCTCCAAAGCTATCACCCAACGTAATCATCAACACCTTCGCAAACAGCACTTCACTTGTTCGACAAAATGTCTCACTCAAACAACACCAATGCATCACCCCTTCATCAGCATACATTCACCTCCCCTTCTGCAGAAAACGTTGCCACTACTGTGACTTCCCCATTGTTGCTCTTGGTTCCGCCTCGGCCCAAATAGACGACGACCCGCGAGTGGTAAACTACATACAATGGCTCTGCAGAGAAATCAGTGCAACACAAGTGGAACTTGATGCCAAGGCACCCCTTGAAACAGTTTACTTTGGTGGTGGAACACCCTCCCTCGTGCCTCCAAGGTTGGTTTCTTTGGTCCTGGAGGCCTTAAAAATGAAGTTTGGGTTGAGTGAGGATGCAGAGATATCGATGGAAATGGATCCAGGGACTTTCAATGCTAAGACGATGAAGGAGGTGATGTTGTTGGGAGTGAATAGGGTGTCTTTGGGAGTTCAAGCATTTCAGGAGAAGCTATTGAAGTCTTGTGGGAGGGCTCATGGTGTGCAAGAGGTTCATGAGGCTATTGATATTGTAAAATTATGTGGGGTTGAGAATTGGAGCATTGATCTTATAGCTTCTCTGCCTCATCAGACCAGTGATATGTGGAAGGAAAGTCTAAGGCTCACAATTGAGGCAGAACCAACTCATGTTTCTGTATATGATTTGCAAATTGAGCAGGGGACAAAATTTGGAAACTTGTACACATCGGGAGAATTCCCTTTGCCTTCCGAGACACAATCTGCTGATTTCTATAAGATGGCTTCAAGGATGCTTTGTGATGCCAATTATAACCATTATGAAATCAGCAGCTATGGTAAGAGTGGATATGAGTGCAAGCACAACTTTACCTATTGGAAGAACAAACCTTTCTATGCCTTTGGCCTAGGCTCTGCTAGTTATATTGGTGGGTTGAGGTTTTCAAGACCAAAGAAGGTGAACGATTACATGAAGTTTGTGGAAAATTTGGAAAATGGATTAGTGAATAGCTCCGGCGATGGCCAGATTCATGCTAAGGACACGGCCACAGATATCGTGATGCTGTCCCTAAGAACTGCAAGAGGCCTAGACATGAAGTGCTTTGAAGAATCATTTGGGAGCTCTATTGTTTCATCACTGATTGAGGCCTATATACCTTATGTTGAGAGTGGACATGTAGTTTGTTTGGATGAAGAGAGAAGAACAATGGGGATAGCTGAGCTCAACAATTCTTTACTGCATAAAACAAATACAGAAAGGAAGCTGGCTTATATAAGGCTAAGTGACCCAGAAGGTTTCCTCTTATCAAATGAGTTAATATCCCTTGCATTTGGGGTTATTGACAATTGCATGGATTGCCTTCAGCACTTGGAGGTTGTTTGA 1443 0.4359 MLKSTFTPIFWALVPKPMSPKLSPNVIINTFANSTSLVRQNVSLKQHQCITPSSAYIHLPFCRKRCHYCDFPIVALGSASAQIDDDPRVVNYIQWLCREISATQVELDAKAPLETVYFGGGTPSLVPPRLVSLVLEALKMKFGLSEDAEISMEMDPGTFNAKTMKEVMLLGVNRVSLGVQAFQEKLLKSCGRAHGVQEVHEAIDIVKLCGVENWSIDLIASLPHQTSDMWKESLRLTIEAEPTHVSVYDLQIEQGTKFGNLYTSGEFPLPSETQSADFYKMASRMLCDANYNHYEISSYGKSGYECKHNFTYWKNKPFYAFGLGSASYIGGLRFSRPKKVNDYMKFVENLENGLVNSSGDGQIHAKDTATDIVMLSLRTARGLDMKCFEESFGSSIVSSLIEAYIPYVESGHVVCLDEERRTMGIAELNNSLLHKTNTERKLAYIRLSDPEGFLLSNELISLAFGVIDNCMDCLQHLEVV 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02789 480 ProSiteProfiles Radical SAM core domain profile. 47 290 IPR007197 GO:0003824|GO:0051536
Arst3g02789 480 Gene3D tm_1862 like domain 60 275 IPR023404 -
Arst3g02789 480 NCBIfam radical SAM family heme chaperone HemW 54 404 IPR004559 GO:0004109|GO:0005737|GO:0006779|GO:0051539
Arst3g02789 480 Pfam Radical SAM superfamily 57 236 IPR007197 GO:0003824|GO:0051536
Arst3g02789 480 SUPERFAMILY Radical SAM enzymes 52 414 - -
Arst3g02789 480 SFLD HemN-like, clustered with heat shock genes 52 415 IPR004559 GO:0004109|GO:0005737|GO:0006779|GO:0051539
Arst3g02789 480 SFLD HemN-like, clustered with heat shock genes 52 415 IPR004559 GO:0004109|GO:0005737|GO:0006779|GO:0051539
Arst3g02789 480 SFLD Radical SAM 52 415 IPR007197 GO:0003824|GO:0051536
Arst3g02789 480 SFLD Radical SAM 52 415 IPR007197 GO:0003824|GO:0051536
Arst3g02789 480 SMART MiaB 52 281 IPR006638 GO:0003824|GO:0051536
Arst3g02789 480 PANTHER COPROPORPHYRINIGEN III OXIDASE 40 468 IPR034505 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02789 - - gmx:100779022 726.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g02789 3 41927822 41929541 Arst3g02789 3 41927822 41929541 ECH