Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02639 ATGCGCTCAGGAGGTTGTACATTGCAACAGACGCTCACAGCGGAGGCGGCTTCAGTGGTGAAGCACGCGCTGGTGTTGGCGCGTAGGAGAGGCCATGCACAGGTGACCCCTCTCCACGTGGCCGCCACTTTGCTGTCTCTGAGAGCCAGCTCTCTCCGCCGAGCATGCCTCAGATCTCAATTTCCCAACCACCAGCAACACCCTCTTCAGTGCAGGGCGCTTGAGCTTTGCTTCAATGTCGCTCTCAATAGACTCCCTACCACAACGCCAACGCCGCCTAACTTTCTCACCGCTAATCCCTCTCTTTCCAATGCTCTCATTGCTGCTCTTAAACGAGCCCAGGCTCACCAGCGTCGCGGCTGCATTGAGCAGCACCAACAGCAGCCTCTTCTTGCTATCAAAGTTGAGCTTGAACACCTTATTATTTCCATTCTTGATGATCCTTCTGTTAGTCGGGTCATGAGAGAAGCTGGATTTTCCAGCACCGCTGTTAAGACTAATATTGAAGATTCTTCTTCTTCTTCTTCTCCAACTTCTCATTCCTCTTCTGCTGCTGGACCTTGTTCTGTTTTCTACGCCAACAACACCAACACTTTCACCACTCTCAGGCACCATCATTTCTTGGGTGGTAATTCTTCTGAGTACCTTCCATCTTCAGCAATGCTGTTTTCCCCTCAGCACAAGTCTTGCAACAAGGAAGACATGATGGCGGTTCTTAATGCGCTGTTAAGCAAGAAGAGGAACACTGTGATAGTTGGCGACTCTTTGTCGATAAGCGAGGCAGTGATGGCGGAACTGATGGTGAAGCTTGAAAGAGGCCATGTACCTGATGAGCTGAAGAACACACAGTTGATCAAGTTCCAATTCTCAGGGCAGATGAAAAGGGAGGAAGTGGAAATGAAGCTCGCAGCACTGAAGAGAAAAGTAGAAGTAGGAGGTGCCATTTTCTATGTTGGGGACTTGAAGTGGACGGTGGAAGGTGAAGGAGGAGGAGAAGTTGAACATGTAGTACAAGAGATTGGGAAGTTGTTTAATGAAAAGAATAGTAATAATAAGAAGGTGTGGCTAATGGGAACAGCGAGTTACCAAACATATATAAAGTGTCAAAGAAGGGAGCCACCTCTTGAGAACCACTGGGCTCTTCAGCCTGTTCCTGTTCCATCATCAGCTCGACTTGCCTTGACTCTCCATGCTACTTCCAGTGTGTATGATTCGAAGATGAGCATGCCCCACAACTCTTCTCACATGTTTGACATAATGCACTTGATGAGTAACAAGAAGGAGGACGAGGAGGAAGAAAAACTGAATTGTTGTGAAGAATGTGCGTCCAATTATGAAAAAGAACTTGGGTTGTTCAAGCCAGGACACAAGAAACTCTTACCTTCTTGGCTTCAGACACATACCACCGAGGCCCATCCAAAGGATGAATTGGGAGAGCTGAAGAGAAAATGGAACAGACTTTGTAACTGTCTCCACCATAGCAAACAACTTGGGCAATATGGTAACAATAACAATGCAAAGATCTATCCTTACAATTCGTCATACCCATGGTGGCCAAATCAAAACACTCTCTTCCCAGATTCAAATTCAACTTCCATATCTTTTGCTGATCCTGTTCTGCCTCATCATCATCATCATAACTCCAACAACAACCACCACCACCACCTGGTGCCGCGGTTCCGGCGCCAACAATCATGCTCTACCATTGAGTTCAATTTCACCGAGGTCACTCAGAAAAAACAAGAATCAATAACAAGATCAGCCACCTTGGACAATCAAGAAGTAAATATTTCTCTGGCTCTTGGAAATTCAACTTTCAGAGATGATGATGGTTCGGGCCAAACACTGGTACTTCAAAGTAGAGCTCATATTTGTAAAGTGTTGCAGGAAAATGTTCCATGGCAATCTGAAACACTTCCTTCAATAGCAGAGGCCTTAGTTGAACTTGATTCAGGAATAACAACAAAGAAACAATGGTTTCTTTTGCAGGGGAATGACTTTGTTGGCAAAACAAGGTTAGCGCGTGCCATCGCTGAATCCGTGTTTGGATTCGGCCTTGTGGATAATCATGATGATGTTTTCCTTCACTTGGATATGAAGAAAGTCGGGCATTCTTCTGTTACCATATTTCCTGAAGTTCTTGCTACATCACTGAGAACCAAAGAGAAGCTTGTTGTTTTAATTGAAGATTTCGATTTGGCCGATTCCCGGTTCAAGAAGTTTGTTGTTGATGAGTTTGAGGCATCAAAGTTTGGGAATTTAAGCAAAAAAGACGAGAATCTAAAGCAAGCTATATTCATTTTGACTTCGGGTGGGGTCGACGGCGATGAGGTGATCAAGAACAAGGACAAGGACTCATCGGTCATGAATTTGGTGTTCAAGATTGAAACCAAGGCTAGCACCATGGATTTTTCATCTTCATCGTTGGCAGCTGATTGTTACTTGGGCCACAAGAAAAGAAGGGCTCATGAACTAGACTTGTTTGGAAAGATTAACAAGAGTCCAAGAATTGAAGAGAATGAAGAGAACTTGTTGCTTCAGGGACAAGTAAACAAGAAGAAAGACTTTTCAAGACAATCGAGTTCCAATACCCTTGATCTTAACATGAAAGCAGATGAAGAAGACTACGATGATGGAGAAGAAGATGAGAGTAGCCCAATTTCAAGTGATTTAACCAGAGATACAATGGCTGAACACATGAACTCAAATGGGTTCCTTGAATCAATTGAGAACAGGTTTGAGTTCAACCAAAGTCCAGCTAGATTGAAAGAAAAAGAGGAACTTTTTTTGAACAAGATCAAAGAGTCTTTTGATGAGGTTTTTGAGAAGAAGAAGATGGTGAAGTTCAATGTAGATGAAAAGGTGATAGAGGAAATTGGTGTTGGGTGTGGTAATTTTACTAACAGCGTGTTTGAGAAATGGCTGAAAGACATTTTTCAAAACAAGTTATTAGAGACAGTTATTAACTGTGATCATGGGAAGGAGGGTATAGTTTTTAATATTACACTTTGTTTGGGGGGTGGTAATGGTAAAGGATATAATAGTAAATTTGATAATAGTAGTGGGGGTGGTGGCGGGTTCATGAATTCATGTTTGCCCAAGAATATCCAAATTAACTACTTCATGGATTGA 3132 0.4333 MRSGGCTLQQTLTAEAASVVKHALVLARRRGHAQVTPLHVAATLLSLRASSLRRACLRSQFPNHQQHPLQCRALELCFNVALNRLPTTTPTPPNFLTANPSLSNALIAALKRAQAHQRRGCIEQHQQQPLLAIKVELEHLIISILDDPSVSRVMREAGFSSTAVKTNIEDSSSSSSPTSHSSSAAGPCSVFYANNTNTFTTLRHHHFLGGNSSEYLPSSAMLFSPQHKSCNKEDMMAVLNALLSKKRNTVIVGDSLSISEAVMAELMVKLERGHVPDELKNTQLIKFQFSGQMKREEVEMKLAALKRKVEVGGAIFYVGDLKWTVEGEGGGEVEHVVQEIGKLFNEKNSNNKKVWLMGTASYQTYIKCQRREPPLENHWALQPVPVPSSARLALTLHATSSVYDSKMSMPHNSSHMFDIMHLMSNKKEDEEEEKLNCCEECASNYEKELGLFKPGHKKLLPSWLQTHTTEAHPKDELGELKRKWNRLCNCLHHSKQLGQYGNNNNAKIYPYNSSYPWWPNQNTLFPDSNSTSISFADPVLPHHHHHNSNNNHHHHLVPRFRRQQSCSTIEFNFTEVTQKKQESITRSATLDNQEVNISLALGNSTFRDDDGSGQTLVLQSRAHICKVLQENVPWQSETLPSIAEALVELDSGITTKKQWFLLQGNDFVGKTRLARAIAESVFGFGLVDNHDDVFLHLDMKKVGHSSVTIFPEVLATSLRTKEKLVVLIEDFDLADSRFKKFVVDEFEASKFGNLSKKDENLKQAIFILTSGGVDGDEVIKNKDKDSSVMNLVFKIETKASTMDFSSSSLAADCYLGHKKRRAHELDLFGKINKSPRIEENEENLLLQGQVNKKKDFSRQSSSNTLDLNMKADEEDYDDGEEDESSPISSDLTRDTMAEHMNSNGFLESIENRFEFNQSPARLKEKEELFLNKIKESFDEVFEKKKMVKFNVDEKVIEEIGVGCGNFTNSVFEKWLKDIFQNKLLETVINCDHGKEGIVFNITLCLGGGNGKGYNSKFDNSSGGGGGFMNSCLPKNIQINYFMD 1043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02639 1043 Pfam Clp amino terminal domain, pathogenicity island component 135 171 IPR004176 -
Arst3g02639 1043 Pfam Clp amino terminal domain, pathogenicity island component 24 46 IPR004176 -
Arst3g02639 1043 SUPERFAMILY Double Clp-N motif 12 169 IPR036628 -
Arst3g02639 1043 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 998 - -
Arst3g02639 1043 MobiDBLite consensus disorder prediction 871 885 - -
Arst3g02639 1043 MobiDBLite consensus disorder prediction 853 867 - -
Arst3g02639 1043 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 623 772 IPR027417 -
Arst3g02639 1043 ProSiteProfiles Clp repeat (R) domain profile. 8 174 IPR004176 -
Arst3g02639 1043 Gene3D - 614 815 IPR027417 -
Arst3g02639 1043 MobiDBLite consensus disorder prediction 853 890 - -
Arst3g02639 1043 Coils Coil 428 448 - -
Arst3g02639 1043 Gene3D - 9 174 IPR036628 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02639 Arst-Chr3 37631664 37635786 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02639 - - aip:107630350 1945.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g02639 3 37631664 37635786 Arst3g02639 3 37631664 37635786 ECH
Arst1g02784 1 89659472 89663508 Arst3g02639 3 37631664 37635786 PCT