Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02116 ATGGAAAAAGTAGCAGATTTCACGTGGTGTCCTGATCTGTCTCCTGGCTACCTTTTGACTAAACGGAGGGGGTTAGCCCGTGAGAGGAAAAACAAATGGATTTTTAAACTCAGCCATGATGAACGTTTTGATAGGTTAGTTAAAATGTGTGCAAAAAGACTAGGAACAGGGACGACCCTTGATGTGTTTCGTCAGCTGGGTCGAGAGACCGGTGTGAAAGAGTTCAATGCATTAATAAAGATGAGTATACAGAAGGCAAGGACTACTAATAATGAATACATTGCCATAGAAGAATTGAGTAAGGCTTTTCACCTTTTAGAAAATATGAAGGAGTGCGGTTTTAAGCTAGAAGAGGAAACATATCAACCACTGCTTAGGTATGTCATAGACATGGGCATGGTTAAAGAGTTTCAACTTTTCTCTGATGTGGTCAGAGCTGAGTGTTCAGTTTCACGGTTAGGTTACTATGAAATGTTGCTGTGGATAAGAGTTGAAGATGAAGAAATGATTCGGGATATTTGTGAATATATTACCGTAGAAGATGGCCAAGACACTGCTGCTATGCGAGAAAATTACTTATTGGCTCTTTGTGAAAGTGATCTGAAGATCCAGATTACAGATGTGTTGAAAAATATAGACATAACAATGCTTTCATCTGCAAAATCTATAGCAAGTGTATTTCAATCATTAGGAAGGCTACAGTTGGAATCTCTTGCCGAGAATTTATTTTTGGATTTGAGAGCACAAGATTTTGATGAAGATGATATTTCAGGCTTCATTGCTGATTATGCTGTTAGCATTCCAAATTTAGCGGTTGAAGATATCATCTCAAAATTCAAGAGTTTGCATGATCTATTGGAAGTTTTACATTCATCGTCATCATATGAAAAGCTGATTATGTATTGCTGTGATTTAGGCAAGGTTGATGTTGCACTTGATCTTGTTGATAATATGTGTGAAGCAGGCTTTACATTGTCAACTAGGATGTTACAGTCCATATTACACATTTGTGAGGAAACCTATGAACATATTTTGGTTTACCGGATCTATTCCATCATACAGCGGTTCCATTTGAAGTTGAATGGTGAAATATGTAGGTGTTTGGTAAATTTTTGCGTGAGGGTGAAAGATTTTAAAGGTGCATACAAGATGGTTGATGACTTGGAGAAAATGAATTTCAAACCTACTACCGCCATGTACAATGCTATAATGGCAGGATATTTTCGAGAGAAAAATATCAGTGGTGCTCTGAGGGTCCTCAAGCACATGCAGGATGCCAATCTTAATCCTGATGTACAGACTTTCAGCTATTTGATTAGTAATTGTGAAACAGAAGAGGATATAATCAAGTATCGTGAAGAAATGGAGCAATATAAAATCCCACTTGCAAAACCGATTTTTATGGCCCTTATTAATTCATATGCAGCTTGTGGCAAATTGGATATGGCAAAACAGGTCATTTTGGATCCGAACATACCAGCAAAAAGCTTAAATGAAATCAAGAGCGTCCTTGTCTCAGCTCTTGCATCACATGGGCAGTTGTCCGAGGCACTCTTAGTATATGAGGAGATTAATAAAGCTGGATACAATTTGGAACCAAAAGCTGTTATAAGTCTTATCGAAGAGTTCACCAAATTCAAAGGAGAGTTGGATGGGATGCTTATGCTACTTACAGAATTGAGTGATCTAGACTATTGGGTCGACGGCTGCTTCAGAGTTATCATATATTGTATTCACAACAAGCATCTAAGTTCTGCTATTGACTTGTTCAAGAAACTCAAGGATAAGTTTGAAAGTGATGAACTAGTATTGGAAGTTCTCTTTGATGAAGTGTTTGCTGCAATTGCAACATCCGAGTCCTCAAATTTGCAGATTGGTTTAGACTTGCTTTGGGCAGTCAAGAACGAGCTTGGTCTCGTGCCTTCACGGCAATGTCTTGATTTTCTTCTAAGTGCCTGCACCAATGCTGGAGATTTGAGTAATGCTCGTTTGATTTGGAGAGAATATGAGGTTGCTGGATTTCCATACAACGTGCTAAGTTATTTGAGGATGTATCAAGCACTTTTGGCATCGGGAGATTATAGATCTGCTAACTTTATGCTAAGTAAAATTCCGAAAGATGACAGCGAGGTATCTGCTATCATCAAAGCCTGTCAAGAAACATACTCTGGTCTTTCCTCTGTGGCAAAGATGAAAACGAAAGTAACAAAAAAGAAAGAAAAACGAGAGGCTTGA 2235 0.383 MEKVADFTWCPDLSPGYLLTKRRGLARERKNKWIFKLSHDERFDRLVKMCAKRLGTGTTLDVFRQLGRETGVKEFNALIKMSIQKARTTNNEYIAIEELSKAFHLLENMKECGFKLEEETYQPLLRYVIDMGMVKEFQLFSDVVRAECSVSRLGYYEMLLWIRVEDEEMIRDICEYITVEDGQDTAAMRENYLLALCESDLKIQITDVLKNIDITMLSSAKSIASVFQSLGRLQLESLAENLFLDLRAQDFDEDDISGFIADYAVSIPNLAVEDIISKFKSLHDLLEVLHSSSSYEKLIMYCCDLGKVDVALDLVDNMCEAGFTLSTRMLQSILHICEETYEHILVYRIYSIIQRFHLKLNGEICRCLVNFCVRVKDFKGAYKMVDDLEKMNFKPTTAMYNAIMAGYFREKNISGALRVLKHMQDANLNPDVQTFSYLISNCETEEDIIKYREEMEQYKIPLAKPIFMALINSYAACGKLDMAKQVILDPNIPAKSLNEIKSVLVSALASHGQLSEALLVYEEINKAGYNLEPKAVISLIEEFTKFKGELDGMLMLLTELSDLDYWVDGCFRVIIYCIHNKHLSSAIDLFKKLKDKFESDELVLEVLFDEVFAAIATSESSNLQIGLDLLWAVKNELGLVPSRQCLDFLLSACTNAGDLSNARLIWREYEVAGFPYNVLSYLRMYQALLASGDYRSANFMLSKIPKDDSEVSAIIKACQETYSGLSSVAKMKTKVTKKKEKREA 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02116 744 PANTHER OS02G0132600 PROTEIN 2 738 - -
Arst3g02116 744 PANTHER OS02G0132600 PROTEIN 2 738 - -
Arst3g02116 744 Gene3D Tetratricopeptide repeat domain 449 569 IPR011990 GO:0005515
Arst3g02116 744 Pfam Pentacotripeptide-repeat region of PRORP 293 440 IPR033443 -
Arst3g02116 744 NCBIfam pentatricopeptide repeat 294 326 IPR002885 -
Arst3g02116 744 NCBIfam pentatricopeptide repeat 399 432 IPR002885 -
Arst3g02116 744 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 396 430 IPR002885 -
Arst3g02116 744 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 291 325 IPR002885 -
Arst3g02116 744 Gene3D Tetratricopeptide repeat domain 342 448 IPR011990 GO:0005515
Arst3g02116 744 Gene3D Tetratricopeptide repeat domain 571 744 IPR011990 GO:0005515
Arst3g02116 744 Pfam PPR repeat 503 528 IPR002885 -
Arst3g02116 744 Pfam PPR repeat 467 487 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02116 Arst-Chr3 25871028 25884480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02116 288 689 Glycosyltransferase AT1G05670 20.815 4.34e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02116 - - adu:107477993 1437.94