Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02070 ATGACGATGATGACTACTACTTCGTTTATCCAATTTCACCAAATAATAATTCTTTTCTTTCTCATTCTCACTTTATGGAACTCTCAAGTAACAATGTCACGCAGGCTATTTGAGTCTACATGCACAAGAGAGAGACATGAGAAATGGATGGAAGAATATGGAAAAGTGTATAAGGATGGTGAAGAGAAAGAAAGAAGGTTCCGAATATTCAAGAACAATGTTGAGTTCATTGAGTCCTTCAATGCGGCTGGGGACAAAAGTTTCAAGCTTAGTGTTAACAGATTTGCGGACCTAAGCGTTGAAGAGTTCAAGGCTTCTCTTAATGGCCTTCCCAAGAGTCATTGGCAAACGACGCCGTTCCGGCATGAGAATGTAACTGACATTCCAGAAACCGTGGACTGGAGGAAAAGAGGAGTTGTTACACCAATCAAGGACCAAGGCACATGTGGTAGTTGGTGGGCATTTTCATCTGTAGCTGCAGTTGAAGGAATCCACAAAATAAGTACAGGTAAACTAGTGTCTCTCTCAGTGCAAGAACTAGTAGATTGCGTAAGAGGCGACGGTGAAGGATGCTATGGTGGTTATATGGAAGATGCGTATACATTCATTGCAAAGAATGGAGGAATATCAAGTGAATCAGACTACCCATACAAACAAGTTGAGAAGCCATGTAAGGCTAATGAGAAGGAAACAATACATAATGTAGCTAAGATTAAAGGGTTCGAGAAGGTTCCTTCTAATAACGAAAAGGCACTCCTCAAAGCTGTGGCAAAACAACCAGTGTCGGTTTATCTTCAAGCTAGTGGGTATTATTTTCAATTTTATTCTAGTGGGATTTTCACTGGAATATGTGAAACTGAGCCAGACCATACTGCTACGGTAGTTGGTTATGGTAAAGATAAGGATGGTACCAAGTATTGGATAGTAAAAAATTCATGGGGTACTGACTGGGGAGAAAAAGGGTACATAAGGATGAAGAGAGAGGTACATGCTAAGGAAGGGTTATGTGGAATTGCCAATAATGTCACGTATCCAATTATTTAA 1044 0.4023 MTMMTTTSFIQFHQIIILFFLILTLWNSQVTMSRRLFESTCTRERHEKWMEEYGKVYKDGEEKERRFRIFKNNVEFIESFNAAGDKSFKLSVNRFADLSVEEFKASLNGLPKSHWQTTPFRHENVTDIPETVDWRKRGVVTPIKDQGTCGSWWAFSSVAAVEGIHKISTGKLVSLSVQELVDCVRGDGEGCYGGYMEDAYTFIAKNGGISSESDYPYKQVEKPCKANEKETIHNVAKIKGFEKVPSNNEKALLKAVAKQPVSVYLQASGYYFQFYSSGIFTGICETEPDHTATVVGYGKDKDGTKYWIVKNSWGTDWGEKGYIRMKREVHAKEGLCGIANNVTYPII 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02070 347 PRINTS Papain cysteine protease (C1) family signature 146 161 IPR000668 GO:0006508|GO:0008234
Arst3g02070 347 PRINTS Papain cysteine protease (C1) family signature 290 300 IPR000668 GO:0006508|GO:0008234
Arst3g02070 347 PRINTS Papain cysteine protease (C1) family signature 306 312 IPR000668 GO:0006508|GO:0008234
Arst3g02070 347 SUPERFAMILY Cysteine proteinases 42 346 IPR038765 -
Arst3g02070 347 Pfam Cathepsin propeptide inhibitor domain (I29) 46 103 IPR013201 -
Arst3g02070 347 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 306 325 IPR025661 -
Arst3g02070 347 SMART Inhibitor_I29_2 46 103 IPR013201 -
Arst3g02070 347 CDD Peptidase_C1A 129 345 IPR039417 -
Arst3g02070 347 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 40 340 IPR013128 GO:0008234
Arst3g02070 347 FunFam Senescence-specific cysteine protease SAG39 26 347 - -
Arst3g02070 347 Gene3D Cysteine proteinases 25 347 - -
Arst3g02070 347 SMART pept_c1 128 346 IPR000668 GO:0006508|GO:0008234
Arst3g02070 347 Pfam Papain family cysteine protease 128 346 IPR000668 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02070 Arst-Chr3 25062814 25065795 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02070 - - gmx:100817009 453.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g02070 3 25062814 25065795 Arst3g02070 3 25062814 25065795 ECH