Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02058 ATGGCTTTGGTTGATGTTATCATTTCTTGCACCGATTCCCTCAAACAGATATCAGAGCATGTGGAAGATGCTATTGTTTATTTAGATGCTGGTTCTACAGAGAGTTTCCAGTTTATAGGGGCATATCCTATACTTCTTGATCTTGGAGCACAAGCTATTTGCAGTTTGGAAAGTATGTCAGTACTTGATGCGGTGGCTGATTGGAACTCACATTCTAATCCTGCGGGGAAATTTGTGGTTATTACATCACGCCTATTAAGTGATGCACATCGGTATATTTTACGTTGCCTGAGTGCACATCAAGTTGTTCGTCACTGCGTTATATTTACATCTATCTCAGAGGCAGCTCATTCGGTGTTTCCGGATTCACCTCTGGGACCAGATGCCTATCGTGAATATGAATCCTTATTGGTTCAAGATTATGACGAACTAAATAAGAAATCTGGGGCAAAACCTAGGCAGTTTGGTAGTAAAGTCCAGGCAAAGATTAAATTTGAAGACGGAGGACGTTCAAAACTTTCTCCCAGTGGAGAGGATGTTCCTCATCTTGAAGCTAGTTCAAGTGGAAGAGATTTTTTGGAACAGACTCCATTGGACTCCACTGAAGATGCAGTGTTTAAATTGGATGTTTCTGTTCATCATTTTCCAATGATTTTATGTCCCTTATCACCAAGAGTATTTGTTCTACCTTCAGAAGGATTGGTGGCTGAAGCACACTTATCATCTGAGCATGAGGATTCCATTGGTCCTGGATTTCCTCCCTTAAGTACTGGTATGCTTTCTGATACAGATGATGTGCCTCCAGGTGCAACTCTCACAGCACACTTTCTCTACCATTTGGCGGCCAAGATGGACTTGAAAATGGAAATTTTCTCCCTTGGGGATATGTCAAAAACTGTTGGAAAAATTTTGACTGACATGTCAAGTCTTTACGATGTAGGCCGCCGTAAACGGTCAGCAGGACTGTTACTCATTGATCGCACACTTGATCTCCTTACTCCTTGCTGTCATGGTGACTCACTATTTGACCGTATGTTCTCTTCTTTGCCCCGAAGGAATCGAATTTCCAATACCCAAGGTAAAGGTTCAGGGCTCCAGCTCAAACTTGGTTCTTCGTACCTGCAACGTGCTCCTTTAGATGCTCAGATACCACTTACAAAGATCCTTAATGATGAAGATTGGCAAATAAACAACTTTCGGCTTTTAGAAAGTGTTGAAGCTTTTCTATGTGGTTGGAACTCTGGTGATTCTGATTCTCAGGTTACAGGTTTGATTAATCTTGGTCAGAAAATTCATGAAAAAGAGAGTCACTCTAGTGCAGAAATACTCATTGGATCTTTTGTTTCCTCTGAAACTTTCCGTGGAACCCCATTCTTGGAAGCTATACTGGATAGAAGAACAAAAGATGGGGGCTTACTAGTAAAGAAATGGCTACAAGAAACTCTGCGCAGGGAAAACATTACTGTAAATGTGAAATCCCGTGCTGGTTTTGTTACAAAACCTGAGCTACAAGCTATGATCAAAGCATTGACTGGGAGCCAATCATCTTTGCTGAAGAATAAAGCAATTATCCAAATTGCTTCAGCCACATTGTTTGCACTTGAAGAAACAAATTGTACCAAGTGGGATGCATTTAGCAGTGCAGAGAAGATTCTGAGTGTGAGTTCAGGGGAAACCAGTCAAAGTCTTGCTGCTCAAATTGGTGATCTCATCAATAAGAGTGCTCTGTTGGGATCTCAAGTAAATAAAGGGAAAAGTGAGATGTCAAAAGGGTTACTTTCTTTGCAAGATGCTATTCTGTTGATGATTGTTGGATATATATTGGCCGGTGAAAATTTTCCATCATCTAGTTCTGAAGGCCCATTTTCTTGGCAGGAGGAACGCTTGTTAAAAGATGCTGTTGTAGATGCCCTTCTTGAAAATCCATCAGTTGCAAATCTCAAGTTTCTAGATGGGATAAGGGAAGAGCTTGAGAAAAATGTATGCAAGTCAAAATCGGAGAAAGATACTGAAAAACTAGACATCGATGATTTTGATGATGAGCAGTGGGGGGAATGGGGGGATGAAGATGTTGAGGATGACAGCAAAAATGAACAAGCGTATGGTGACGTGCAACTTAAGTTGGAGTTGCGCGACAGGGTGGATAACTTGTTCAAATTTCTTCATAAGTTATCCAATCTGAAAAGAAAGAATATACCACTTAGGGATGGATCATTGACCATGGAAGGCAATTTCAGTGAGGATTCCTATATGGGGAAAGGATTACTTTATAAGCTACTAACAAGGGTGCTAGGCAAGTATGACGTGCCAGGGTTAGAATATCATTCTTCCACTGTAGGTCGTCTGTTCAAAAGCGGGTTTGGCAGATTTGGCCTTGGTCAGGCAAAACCAAGTCTTGCTGATCAAAATGTCATTTTGGTGTTTGTTATTGGGGGCATTAATGGAGTCGAGGTTCGTGAAGCTCAAGAGGCATTGGCTGAAAGCGGAAGACCTGACATAGAATTGCTTGTTGGTGGAACAACTCTTCTAACTCCTGAAAACATGCTTGATTTATTGCTAGGGGACTCCAGTTTCTTTTAA 2580 0.4124 MALVDVIISCTDSLKQISEHVEDAIVYLDAGSTESFQFIGAYPILLDLGAQAICSLESMSVLDAVADWNSHSNPAGKFVVITSRLLSDAHRYILRCLSAHQVVRHCVIFTSISEAAHSVFPDSPLGPDAYREYESLLVQDYDELNKKSGAKPRQFGSKVQAKIKFEDGGRSKLSPSGEDVPHLEASSSGRDFLEQTPLDSTEDAVFKLDVSVHHFPMILCPLSPRVFVLPSEGLVAEAHLSSEHEDSIGPGFPPLSTGMLSDTDDVPPGATLTAHFLYHLAAKMDLKMEIFSLGDMSKTVGKILTDMSSLYDVGRRKRSAGLLLIDRTLDLLTPCCHGDSLFDRMFSSLPRRNRISNTQGKGSGLQLKLGSSYLQRAPLDAQIPLTKILNDEDWQINNFRLLESVEAFLCGWNSGDSDSQVTGLINLGQKIHEKESHSSAEILIGSFVSSETFRGTPFLEAILDRRTKDGGLLVKKWLQETLRRENITVNVKSRAGFVTKPELQAMIKALTGSQSSLLKNKAIIQIASATLFALEETNCTKWDAFSSAEKILSVSSGETSQSLAAQIGDLINKSALLGSQVNKGKSEMSKGLLSLQDAILLMIVGYILAGENFPSSSSEGPFSWQEERLLKDAVVDALLENPSVANLKFLDGIREELEKNVCKSKSEKDTEKLDIDDFDDEQWGEWGDEDVEDDSKNEQAYGDVQLKLELRDRVDNLFKFLHKLSNLKRKNIPLRDGSLTMEGNFSEDSYMGKGLLYKLLTRVLGKYDVPGLEYHSSTVGRLFKSGFGRFGLGQAKPSLADQNVILVFVIGGINGVEVREAQEALAESGRPDIELLVGGTTLLTPENMLDLLLGDSSFF 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02058 859 SUPERFAMILY Sec1/munc18-like (SM) proteins 204 338 IPR036045 -
Arst3g02058 859 SUPERFAMILY Sec1/munc18-like (SM) proteins 474 853 IPR036045 -
Arst3g02058 859 Gene3D - 772 854 IPR027482 -
Arst3g02058 859 PANTHER VESICLE PROTEIN SORTING-ASSOCIATED 13 852 IPR001619 GO:0016192
Arst3g02058 859 MobiDBLite consensus disorder prediction 244 263 - -
Arst3g02058 859 Gene3D - 221 340 IPR027482 -
Arst3g02058 859 MobiDBLite consensus disorder prediction 166 194 - -
Arst3g02058 859 Pfam Sec1 family 498 850 IPR001619 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02058 Arst-Chr3 24896294 24905181 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02058 - - ahf:112789909 1644.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g02058 3 24896294 24905181 Arst3g02058 3 24896294 24905181 ECH