Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01952 ATGGACAACGACAACCGCCGCGCTTCCCGCCGCACGGAAGTCCTCTCGAAGCACCTCTTCCCGCACCCTCTCACAACGACCGCCCTCCTCTCGACCTCCAACTGCCTCAGCTACTCTCCACCAGAGCTCTCCTCCTCCAACCCGGTCTCCTTCGACACTTCCCGGATGCGCGCTCTCCTCGACGGCCACAACCTCGACGACCGTGACTGGCTCTTCGGCCTCATCGTTCAGAGCCCTCTCTTCAATCGCCAAGAGCGCGGCGGCCGCGTCTTCGTCTCTGTCGACTATAACCACACCATGGAGCAGCAGCGCGAGGAGACCATGCGCCGGATCGGTTACCTTCTCGATCGCGGCGTCTTTAGAGGTTGGCTCACCGGCGATGGCCCTCAGGAAGAGCTCAGGAAGCTGGCCCTTCATGAGGTCGTCTCCATGTACGATCACTCCCTCGCCGTCAAGATCGGTGTCCATATCTTCTTGTGGGGTGGGGCTGTAAAATTTCTTGGAACAAAGCGGCATCATGACAAGTGGTTGAGAGCTACTGAAAACTATGAGCTGAAGGGTTGTTTCGCTATGACTGAGTTGGGACATGGAAGTAATGTACGGGGAGTCGAAACAGTAACTACTTATGATTCGAGAACTGGAGAATTTGTCATCAATACTCCATGTGAATCGGCGCAGAAGTACTGGATTGGTGGTGCAGCAAATCATGCAACACACACTATAGTGTTTTCACAGCTCTACATAAATGGAGGCAATCAAGGCGTGCATGCATTTATTTGCCCAATTAGGGATTCAAGTGGAAATGTATGCCCAAACGTCCGCATAGCTGAGTGTGGTCACAAAATTGGTTTAAATGGAGTTGATAATGGCCGTATCTGGTTTGACAATGTAAGAATACCAAGAGAGAATTTGCTGAATTCCGTGGCTGATGTTTCACCAAGAGGTGAATATTTGAGTTCCATAAAAAATGTAGATCAGAGATTTGCAGCATTTTTAGCCCCTTTGACCTCTGGTCGTGTAACTATTGCCTCTAGTGCTGTTTACATCTCCAAGATTGGCTTATCCATTGCTATAAGATATGCATTGACAAGACGAGCCTTTTCTATGACACCAAACGGACCTGAAATTCTGTTGCTTGATTACCCAAGTCATCAGCGGCGTCTACTACCCTTACTTGCAAAGATATATGCAATGAGTTTTGCTGCAATTGAGCTCAAAATGATGTATGTGAATAGAACACCCGAGTCAAACAAAGCAATCCATATTGTTTCAAGTGCTTATAAGGCTACCTTTACGTGGAATAATATGCGCACACTTCAGGAATGTCGTGAAGCCTGTGGAGGACAGGGCATTAAAAGTGAAAATCGTATCGGTCCGTTCAAGGGCGAATTTGATGTGCATTCAACATTTGAAGGGGACAATAATGTTCTGATGCAGCAGATTAGCAAGGCGCTCCTTGGAGAATTCATTGTGTGTCAGACTAAGAAGAAGCCATTTAGAGGTTTGGGGTTAGAACACATGAACAACCCTGCACCTGTCATCCCATCTCAGTTAACGAGTTCTATTCTCATGAGCAGGGAATTTCAGCTTGATCTCTTCCACCTAAGAGAGCGAGATCTATTGAGACGCTTTGCTGCGGAGGTTTCACAATATCAAACTCAGGGGGAAAGCAAAGAGTCTGCCTTTAATCTAAGCTATCAAGTCGCAGAGGACTTAGGCAGAGCTTTCTCTGAACGCGCAATACTGAAAACCTTCATCGAGATCGAGTCAAAGGTGCCGGCTGGTTCATTGAAGGATGTCTTGGGTCTGTTGAGGTCGTTATATGCCTTGATTTCTGTGGATGAAGATGCTGCTTTTCTTCGCTATGGATACTTGTCAACTGAGAATGCTGCTGCAGTGCGGAAAGAAGTGCCGAAACTGTGTACTGAACTTCGACCGCACGCATTCGCCTTGGTCAGTTCCTTCGGTATTCCCGATGCCTTCTTGAGTCCTATTGCGTATGACTGGGTTGGTTCGAATGCATGGTCCTCTGCTCAACACTAG 2043 0.4797 MDNDNRRASRRTEVLSKHLFPHPLTTTALLSTSNCLSYSPPELSSSNPVSFDTSRMRALLDGHNLDDRDWLFGLIVQSPLFNRQERGGRVFVSVDYNHTMEQQREETMRRIGYLLDRGVFRGWLTGDGPQEELRKLALHEVVSMYDHSLAVKIGVHIFLWGGAVKFLGTKRHHDKWLRATENYELKGCFAMTELGHGSNVRGVETVTTYDSRTGEFVINTPCESAQKYWIGGAANHATHTIVFSQLYINGGNQGVHAFICPIRDSSGNVCPNVRIAECGHKIGLNGVDNGRIWFDNVRIPRENLLNSVADVSPRGEYLSSIKNVDQRFAAFLAPLTSGRVTIASSAVYISKIGLSIAIRYALTRRAFSMTPNGPEILLLDYPSHQRRLLPLLAKIYAMSFAAIELKMMYVNRTPESNKAIHIVSSAYKATFTWNNMRTLQECREACGGQGIKSENRIGPFKGEFDVHSTFEGDNNVLMQQISKALLGEFIVCQTKKKPFRGLGLEHMNNPAPVIPSQLTSSILMSREFQLDLFHLRERDLLRRFAAEVSQYQTQGESKESAFNLSYQVAEDLGRAFSERAILKTFIEIESKVPAGSLKDVLGLLRSLYALISVDEDAAFLRYGYLSTENAAAVRKEVPKLCTELRPHAFALVSSFGIPDAFLSPIAYDWVGSNAWSSAQH 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01952 680 FunFam Acyl-coenzyme A oxidase 331 495 - -
Arst3g01952 680 Pfam Acyl-CoA dehydrogenase, C-terminal domain 330 486 IPR009075 GO:0016627
Arst3g01952 680 Gene3D - 187 324 IPR046373 GO:0016627
Arst3g01952 680 SUPERFAMILY Acyl-CoA dehydrogenase C-terminal domain-like 327 494 IPR036250 GO:0016627
Arst3g01952 680 Pfam Acyl-CoA oxidase 528 662 IPR002655 GO:0003997|GO:0005777|GO:0006635
Arst3g01952 680 SUPERFAMILY Acyl-CoA dehydrogenase C-terminal domain-like 523 666 IPR036250 GO:0016627
Arst3g01952 680 Gene3D - 527 656 - -
Arst3g01952 680 Pfam Acyl-CoA dehydrogenase, middle domain 188 297 IPR006091 GO:0016627
Arst3g01952 680 PANTHER ELECTRON TRANSPORT OXIDOREDUCTASE 41 668 IPR012258 GO:0003997|GO:0005777|GO:0006631|GO:0071949
Arst3g01952 680 FunFam Acyl-coenzyme A oxidase 187 323 - -
Arst3g01952 680 PIRSF Acyl-CoA_oxidase 38 678 IPR012258 GO:0003997|GO:0005777|GO:0006631|GO:0071949
Arst3g01952 680 SUPERFAMILY Acyl-CoA dehydrogenase NM domain-like 131 308 IPR009100 GO:0016627
Arst3g01952 680 FunFam Acyl-coenzyme A oxidase 527 655 - -
Arst3g01952 680 Gene3D - 334 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01952 Arst-Chr3 23147856 23153351 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01952 5 677 Acyl Lipid Metabolism Gene Families AT1G06290 70.772 0.0 1032
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01952 K00232 - gmx:100790627 1136.32