Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01950 ATGAAATCAACAAGAATGGAATCATCAGCAGCTTCTTTGAAGATAGCAATGTATCCATGGCTAGCTCTTGGGCACCAAACTGCACACTTCCACTTAGCCAACAAGTTAGCCGAAAAAGGCCACAATATCACATTCTTCGCCCCAAAAACAACACAATCCAAATTAGCTTCCTTCAATCACCACCCCAACCTTATCACCTTTGTCACAATCACTGTTCCTAATGTTGAAGGCCTTCCACCACATGCTGAAACCACCTCAGATGTGTCTCCGCCTTTGCTTGCAGTCCTCATGACCGCCATGGATCAAACTCAACAAGTAATGGAAACCCATCTTTCGACTCTTAAACCTGATATTGTTTTCTATGACTATTTCACTCACTGGTTGCCACCATTGGCAAGGCGTCTAGGAATCAAGGCCATTCATTATTGCACTGCGCGTTCTGTGATGGTAGGCTATCTTCTCTCCCCTGCAAGGATCAATCAAGGGATACACAATCATGTTGATCTAACGCATCCTCCTCCGGGGTACCCTGCTTCGTCGTCCATAACGCTTCATACACATGAGGCACGAGAAATATATAACAAGAGAAACATAATTTTCGGCAGCAATGTTCTTCTCCGTGAACGTATATTCAATACCATGATTGAATCTGACGCTTTGGCATATAGAACATGCAGGGAAATTGAAGGGCCTTACCTTGACTACGTAGAGGAACAATTCAAGAAGCCTGTGATTCTATCAGGACCAGTTCTGGAGCGACCGAATGCTAGTCTAGACGAAAAATGGGGTTCATGGCTTCAAGGGTTCAAAAGAGGTTCAGTGGTTTATTGTTGTTTTGGAAGTGAGTGCTGGTTACAACCAAATCTGTTCAAAGAATTGCTGCTGGGTCTTGAACTCACCAACATGCCGTTTCTAGCGGCATTGAAAGCCCCAGTTGGGTTCGATTCAGTTGGAGAGGCGCTACCAGAAGGGTTCGAAGAGAGGGTTGCAGGAAGAGGAATCGTGTATGGAGGGTGGATCCAACAGCCATTGATATTGGAACACCCTTCTGTGGGTTGCTTCATTACACATTGTGGATCAAGCTCGTGTACAGAGGCATTGCTGAATGAGTGTCAAATAGTGTTGCTTCCAAATGGTGGTGACCAGTTCCTTAATGCAAGAATGATGGCAAACTACTTGCAAGTTGGTTTGGAAGTGGAAAAGGGGGAACAAGATGGATTCTACACCAAGGAAAGTGTGTGCAAAGCTGTCACTATTTTGATGGATGATGAGAATCAAACAAGTAAAACACTCAGAGCTAACCATGCTAAATTAAGACACATTTTGCTTCTTAAAGATTTGGACTCCACTTATATTGACAACTTCTGCAAGAACCTTCATCATATTATAAGGGAAAAAAATTAG 1404 0.4352 MKSTRMESSAASLKIAMYPWLALGHQTAHFHLANKLAEKGHNITFFAPKTTQSKLASFNHHPNLITFVTITVPNVEGLPPHAETTSDVSPPLLAVLMTAMDQTQQVMETHLSTLKPDIVFYDYFTHWLPPLARRLGIKAIHYCTARSVMVGYLLSPARINQGIHNHVDLTHPPPGYPASSSITLHTHEAREIYNKRNIIFGSNVLLRERIFNTMIESDALAYRTCREIEGPYLDYVEEQFKKPVILSGPVLERPNASLDEKWGSWLQGFKRGSVVYCCFGSECWLQPNLFKELLLGLELTNMPFLAALKAPVGFDSVGEALPEGFEERVAGRGIVYGGWIQQPLILEHPSVGCFITHCGSSSCTEALLNECQIVLLPNGGDQFLNARMMANYLQVGLEVEKGEQDGFYTKESVCKAVTILMDDENQTSKTLRANHAKLRHILLLKDLDSTYIDNFCKNLHHIIREKN 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01950 467 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 442 - -
Arst3g01950 467 PANTHER GLYCOSYLTRANSFERASE 14 456 - -
Arst3g01950 467 ProSitePatterns UDP-glycosyltransferases signature. 339 382 IPR035595 -
Arst3g01950 467 FunFam Glycosyltransferase 9 261 - -
Arst3g01950 467 Gene3D Glycogen Phosphorylase B; 3 261 - -
Arst3g01950 467 CDD GT1_Gtf-like 13 424 IPR002213 GO:0008194
Arst3g01950 467 Gene3D Glycogen Phosphorylase B; 262 442 - -
Arst3g01950 467 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 338 424 IPR002213 GO:0008194
Arst3g01950 467 FunFam Glycosyltransferase 262 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01950 Arst-Chr3 23106214 23107701 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01950 17 467 Glycosyltransferase AT5G54010 44.150 4.89e-141 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01950 K22794 - gmx:100780270 600.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g01950 3 23106214 23107701 Arst3g01950 3 23106214 23107701 ECH
Arst8g02518 8 34422452 34424413 Arst3g01950 3 23106214 23107701 PCT
Arst8g02235 8 31483210 31483777 Arst3g01950 3 23106214 23107701 PCT