Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01949 ATGGATACAAGTTCCTTGAGCATTGCCATGTATCCATGGCTAGCCCTTGGTCATCAAACTCCATTCCTCCACCTATGTAACAAGTTAGCCAAAAGAGGCCACAGAATCACATTCTTTGCGCCCAAAACAGCACAATCCAAGTTACTCCATTTCAATCTTTATCCAGATCTCATCAAATTCGTCGCCGTCGCGGTTCCCCACGTGCACGGCCTTCCACCCAACGCAGAAACCACTTCAGACGTTCCTTACCCTCTGCACCCACTCATCATGACAGCAATGGACTTAACCCAAGCCCACATAGAAACTTATCTTTCCCAACTTAAACCTGATCTTGTTTTCTATGATTTCACTCATTGGATGCCATCATTGGCAAGGCGTTTAGGAATCAAGGCCATTCACTTTTGTATTGTCAGTTCTGCCATGATAGGCTACACTGTTGTACCTTCAAGATTCCAAAAAGGGAACGACCAAACAATGAATGATCTCATGAAACCTCCTCCAGGGTACCCTCATTCATCTATCACATTTCACGTCCATGAGGCGCGAGCGTACGCTAACAAGCGGAAACAGGTGTATGGGAGCAATGTTCTTTTCTATGATCGTATGTTCATTTCCATGAGTGAAGCCGATGCAATAGCGTTCAGAACTTGCAGGGAAATTGAAGGGCCTTACCTCGATTTCATAGAGGAACAGTTCAAGAAGCCTGTGCTTCCTACAGGACCAGTGATACTAGAGAAACCGAACTCTGCATTGGATGAGAAATGGGCTTCTTGGCTTGGAGAATTCAAACAAGGCTCGGTGGTTTATTGTTGTCTTGGAAGTGAGTGCAGGTTGAGGCCAAACCTGTTTCAAGAATTGTTGTTGGGTCTTGAACTAGTTGGCATGCCTTTTCTTGCAGCTTTGAAACCCCCAATTGGGTTTGATTCAGTTGGAGACGCGCTACCAGAAGGGTTCGAAGAGAGGGTTAAAGGAAGAGGGATTGTGTATGGAGGGTGGATCCAGCAGCCATTGATATTGGAACACCCTTCTGTTGGATGCTTCATTACACATTGCGGATCAGGTTCTTTGTCAGAGGCATTGCTCAATGAGTGCCAGTTGGTGTTGCTTCCAAATGTTGGTGACCAGATTCTGAATGCAAGAATGATGAGTAAGAATTTGCAAGTTGGTGTGGAAGTGGAGAAAGGGGAAGACGATGGATTGTACACTAAGGAAAGTGTGTGCAAAGCAGTTAGTATTGTAATGGATGATGAGAATGAGACAAGCAGAATAGTCAGAAGTAACCATGCTAAGATCAGAGAGGTGTTGCTTAATAAAGATTTAGAGTCTACTTATATTGATGCTTTCTGTAAGAATCTTCAAGAGATACTTTGA 1371 0.442 MDTSSLSIAMYPWLALGHQTPFLHLCNKLAKRGHRITFFAPKTAQSKLLHFNLYPDLIKFVAVAVPHVHGLPPNAETTSDVPYPLHPLIMTAMDLTQAHIETYLSQLKPDLVFYDFTHWMPSLARRLGIKAIHFCIVSSAMIGYTVVPSRFQKGNDQTMNDLMKPPPGYPHSSITFHVHEARAYANKRKQVYGSNVLFYDRMFISMSEADAIAFRTCREIEGPYLDFIEEQFKKPVLPTGPVILEKPNSALDEKWASWLGEFKQGSVVYCCLGSECRLRPNLFQELLLGLELVGMPFLAALKPPIGFDSVGDALPEGFEERVKGRGIVYGGWIQQPLILEHPSVGCFITHCGSGSLSEALLNECQLVLLPNVGDQILNARMMSKNLQVGVEVEKGEDDGLYTKESVCKAVSIVMDDENETSRIVRSNHAKIREVLLNKDLESTYIDAFCKNLQEIL 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01949 456 FunFam Glycosyltransferase 255 437 - -
Arst3g01949 456 FunFam Glycosyltransferase 2 254 - -
Arst3g01949 456 Gene3D Glycogen Phosphorylase B; 256 436 - -
Arst3g01949 456 CDD GT1_Gtf-like 8 448 IPR002213 GO:0008194
Arst3g01949 456 ProSitePatterns UDP-glycosyltransferases signature. 332 375 IPR035595 -
Arst3g01949 456 PANTHER GLYCOSYLTRANSFERASE 7 449 - -
Arst3g01949 456 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 4 437 - -
Arst3g01949 456 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 327 418 IPR002213 GO:0008194
Arst3g01949 456 Gene3D Glycogen Phosphorylase B; 5 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01949 Arst-Chr3 23089692 23091276 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01949 10 456 Glycosyltransferase AT5G54010 47.321 3.36e-158 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01949 K22794 - gmx:100780270 684.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g01949 3 23089692 23091276 Arst3g01949 3 23089692 23091276 ECH
Arst8g02519 8 34427640 34428781 Arst3g01949 3 23089692 23091276 PCT