Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01830 ATGGCAACGCAAATGGCGGCGGCAGCAGTAGTTTCATCTTCTATTGTCTCCACAACCCCCAAAATCACAGCATCAACATACGCCTCTCTCCTCCTTTCCAAAGCCCATCACCATTGCCGCCTCGCGTTCAATCCAATCTTAAAATCCTCTCCACTCCGCCTCACGTTCCTCCCCAATAAACCCAGATCCACCCTCCCCCTCCGCCGCACCAATGCCACCGCACCTCAAACTCGATGCCTCTTCACCGGCATCGTTGAAGAATTGGGAACCGTCAAGCAACTCGGTAAGGTCCCACACGGTGGCTTCGACATGGTAATTGCGGCCAAGACCGTTCTTGAGGGCGTTAACCTCGGCGACAGCATCGCCGTTAACGGAACCTGCCTCACCGTAACGGAGTTCGACGCCAACACGTTCACCGTTGGCTTGTCACCGGAGACTCTGAGGAAGACCTCGCTGGAAGAGCTGCAGAGCGGGTCACTGGTCAACCTGGAGCGGGCGTTGACCCCTACGAGCCGCATGGGCGGGCACTTCGTCCAAGGTCACGTGGATGGCACGGGTATCATACTCTCGAAGGTTCCTGAAGGTGATTCGCTTTGGATCAAGGTAAAGGCTGAGAAGGAGTTGCTGAAGTATGTGGTGCCAAAGGGATTTATTGCAGTGGATGGGACGAGTTTGACGGTGGTGAATGTGAATGATGGAGAAGGATGGTTCAATTTCATGCTTGTGGCGTACACGCAGCAGAAGGTGGTTATTCCATTGAAGGAAGTTGGCCAGAAAGTGAACCTGGAGGCTGACATTCTTGGGAAGCAAGTGGAGAGGCTACTTAGTGGATACATTAGCATTAGGAGCTCTTGA 855 0.5368 MATQMAAAAVVSSSIVSTTPKITASTYASLLLSKAHHHCRLAFNPILKSSPLRLTFLPNKPRSTLPLRRTNATAPQTRCLFTGIVEELGTVKQLGKVPHGGFDMVIAAKTVLEGVNLGDSIAVNGTCLTVTEFDANTFTVGLSPETLRKTSLEELQSGSLVNLERALTPTSRMGGHFVQGHVDGTGIILSKVPEGDSLWIKVKAEKELLKYVVPKGFIAVDGTSLTVVNVNDGEGWFNFMLVAYTQQKVVIPLKEVGQKVNLEADILGKQVERLLSGYISIRSS 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01830 284 FunFam Riboflavin synthase, alpha subunit 181 283 - -
Arst3g01830 284 ProSiteProfiles Riboflavin synthase alpha chain lumazine-binding repeat profile. 80 176 IPR026017 -
Arst3g01830 284 PANTHER RIBOFLAVIN SYNTHASE ALPHA CHAIN 71 276 IPR001783 -
Arst3g01830 284 CDD Riboflavin_synthase_like 81 267 IPR001783 -
Arst3g01830 284 FunFam Riboflavin synthase, alpha subunit 80 168 - -
Arst3g01830 284 Pfam Lumazine binding domain 82 166 IPR026017 -
Arst3g01830 284 Pfam Lumazine binding domain 179 265 IPR026017 -
Arst3g01830 284 Gene3D - 80 167 IPR023366 -
Arst3g01830 284 Gene3D - 181 280 IPR023366 -
Arst3g01830 284 SUPERFAMILY Riboflavin synthase domain-like 80 167 IPR017938 -
Arst3g01830 284 NCBIfam riboflavin synthase 80 277 IPR001783 -
Arst3g01830 284 SUPERFAMILY Riboflavin synthase domain-like 172 278 IPR017938 -
Arst3g01830 284 ProSiteProfiles Riboflavin synthase alpha chain lumazine-binding repeat profile. 177 275 IPR026017 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01830 Arst-Chr3 21502246 21504891 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01830 K00793 - gmx:100809163 350.517