Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01660 ATGGGCACTTCTAATCCTAACATGCTGCTAAATTATGTTCCAGTGTATGTCATGCTCCCACTAGGAGTTGTGAATGTGAATGATGTGTTTGAAGACCCAGAAGGCCTAAAGAAACAACTATTGCAGCTAAAGGAAGCAGGCGTTGATGGCGTGATGGTTGATGTGTGGTGGGGGATCATAGAACTGAACGGTCCAAAACAATATGATTGGGGCACATATAGGAGCTTGTTCAAGCTGGTTCAAGAATGTGGCCTGAAACTGCAGGCAATAATGTCATTCCATCAATGTGGAGGGAATGTAGGAGATATTGTCAATATCCCAATTCCAAAATGGGTGCTTGACATTGGAGATTCGGATCCTGATATCTTTTACACCAATAGATCAGGTAACAGGAACATAGAGTATCTCACTATTGGTGTAGATAACCTCCCTCTTTTCCATGGTAGAACAGCCATCCAGATATACAGTGATTACATGAAGAGTTTCAAGGAAAACATGTCAGATTTTATAGAATCTGGACTAATTATAGACATTGAAGTTGGGCTTGGACCAGCAGGAGAGCTTAGATTCCCTTCTTATCCACAAAGTCAAGGATGGGAATTTCCTGGTATTGGGGAGTTTCAGTGCTATGACAAATATTTGAAGGCAGAGTTTAAAGCTGCTGCAGCTAAAGCTGGCCATGCTGAATGGGAACTGCCAGATGATGCAGGGTCTTACAATGATGTACCAGAATCTACTGAGTTCTTCAAATCAAATGGAACATACCTCACTGAAAAAGGGAAGTTCTTCTTAACTTGGTATTCCAACAAATTGCTGATCCATGGTGATCAGATCCTAGAGGAAGCCACCAAAGCTTTCCAGGGCTGCAATGTCACGATAGCAATTAAAGTCTCTGGAATTCATTGGTGGTACAAATCTGAAAGTCATGCTGCTGAGCTCACTGCTGGATATTACAACCTTCAAGATAGAGATGGGTACCGTCCTATTGCAAGGATGCTGACTCGTCATCATCTGATATCAAATGTAAAAAACATGTGTAGCTGTGTTCAAATTGACATGAATATCTCTGCACAGGTATTGAGTGGAGGTTGGAGAGAAAAAATTGAAGTTGCTGGTGAAAATGCACTGCCAAGGTATGATGCTGCAGCTTACAACCAAATGATACTGAATGCTAGACCAAACGGTGTCAACAAAAATGGCCCCCCAAAACTAAGCATGTATGGGATAACGTATCTCCGTCTTTCGGATGAACTACTGCAAAAATCAAATTTTGCTATATTCAAAAAATTCGTGCTAAAGATGCATGCAGATCAGGATTATGTTGAAGATCCTAACCAGTATAATCATGTCATAATTCCACTGAAGCCATCAGGACCGAAAATTCCCCTTGAGAAAATTCTTGAAGCAACCAAACCAATACCGCCATTCCCCTGGGACTCAGAGACAGACATGAAAGTTGATGGCTGA 1467 0.4151 MGTSNPNMLLNYVPVYVMLPLGVVNVNDVFEDPEGLKKQLLQLKEAGVDGVMVDVWWGIIELNGPKQYDWGTYRSLFKLVQECGLKLQAIMSFHQCGGNVGDIVNIPIPKWVLDIGDSDPDIFYTNRSGNRNIEYLTIGVDNLPLFHGRTAIQIYSDYMKSFKENMSDFIESGLIIDIEVGLGPAGELRFPSYPQSQGWEFPGIGEFQCYDKYLKAEFKAAAAKAGHAEWELPDDAGSYNDVPESTEFFKSNGTYLTEKGKFFLTWYSNKLLIHGDQILEEATKAFQGCNVTIAIKVSGIHWWYKSESHAAELTAGYYNLQDRDGYRPIARMLTRHHRXISNVKNMCSCVQIDMNISAQVLSGGWREKIEVAGENALPRYDAAAYNQMILNARPNGVNKNGPPKLSMYGITYLRLSDELLQKSNFAIFKKFVLKMHADQDYVEDPNQYNHVIIPLKPSGPKIPLEKILEATKPIPPFPWDSETDMKVDG 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01660 489 SUPERFAMILY (Trans)glycosidases 9 484 IPR017853 -
Arst3g01660 489 PRINTS Plant beta-amylase signature 426 440 IPR001371 GO:0000272|GO:0016161
Arst3g01660 489 PRINTS Plant beta-amylase signature 173 182 IPR001371 GO:0000272|GO:0016161
Arst3g01660 489 PRINTS Plant beta-amylase signature 378 387 IPR001371 GO:0000272|GO:0016161
Arst3g01660 489 PRINTS Plant beta-amylase signature 364 373 IPR001371 GO:0000272|GO:0016161
Arst3g01660 489 PRINTS Plant beta-amylase signature 393 409 IPR001371 GO:0000272|GO:0016161
Arst3g01660 489 PRINTS Plant beta-amylase signature 411 425 IPR001371 GO:0000272|GO:0016161
Arst3g01660 489 Pfam Glycosyl hydrolase family 14 16 431 IPR001554 GO:0000272|GO:0016161
Arst3g01660 489 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 10 440 IPR001554 GO:0000272|GO:0016161
Arst3g01660 489 FunFam Beta-amylase 4 464 - -
Arst3g01660 489 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 47 61 IPR001554 GO:0000272|GO:0016161
Arst3g01660 489 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 90 111 IPR001554 GO:0000272|GO:0016161
Arst3g01660 489 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 255 274 IPR001554 GO:0000272|GO:0016161
Arst3g01660 489 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 308 319 IPR001554 GO:0000272|GO:0016161
Arst3g01660 489 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 68 86 IPR001554 GO:0000272|GO:0016161
Arst3g01660 489 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 183 205 IPR001554 GO:0000272|GO:0016161
Arst3g01660 489 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 356 378 IPR001554 GO:0000272|GO:0016161
Arst3g01660 489 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 291 307 IPR001554 GO:0000272|GO:0016161
Arst3g01660 489 ProSitePatterns Beta-amylase active site 1. 94 102 IPR018238 GO:0000272|GO:0016161
Arst3g01660 489 Gene3D Glycosidases 3 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01660 Arst-Chr3 18996950 19000215 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01660 3 487 Glycoside Hydrolase AT2G32290 63.489 0.0 653
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01660 K01177 - gmx:547931 798.505