Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01648 ATGTTACTCAATTCTTCTTCCTCCATTATTTCAAATGTTCATCTTGCCAAACATAACGAACCAGTGGAACCTCTTATTAGTAATCATAGAATTATTAACAGTTCTCGGATCCGTTGCGTGGCAACAACCACAGCCGTTGTTCCTCCAAGAAAATCAGCAAATTACCAGCCTAACCTCTGGACTTTCGACTTTTTACAGTCCTTAAAGCATGATTATTCGGATTCGATATACGAGGATTTAAATGGGAATCTAAAAGAGAAAGTTAGGAGAATGATAAAGCAGAAGGAAGATAATGGAGAGATATGGCGGCATAAACTGGATCTAGTTAATGATGTGAAGAGGTTGGGTCTGAGTTACCACTTTGAGAAGGAAATAGAAGAAACACTTGATAGGTTTGTGTCTAGTAGTGGCAAATTTGTGAATACGAATAACCTGCACGAAACCGCTTTAAGCTTCAGGCTCCTAAGAGAATATGGCTATGATGTCTCACCAGATGTGTTTGAGAAGTTCAAGGACAAGAAAAATAACTTCAAGAAAAGCCTTACCAAAGACGTGAAAGGGATGCTGAGTCTATACGAGGCATCATTTCTTGGTTATGAAGGAGAAACAATCTTGGATGAGGCAAAATCATTCACAACCTTCCATCTCAAGAACTTAATCATCAATGATGAGAATAATGTCCTCTTAGAACAAGTGAAGCATGCATTGGAACTTCCATTGCATCATAGAATCCAAAGACTTGAAGCCAGATGGTACATTGAGGCTTATGAAAAAAGAAGAGACGCAAATAGGATATTACTTGAAGCAGCTAAATTAGATTTTAACGTTGTTCAATCAACACTTCAAAAAGACCTTCAAGAAATCTCAAGATGGTGGAAGCAAGTGGGAGTAGCCTCAAAGTTAAGCTTCAGCAGAGACAGGTTAATGGAGTGTTTCTTTTGGACTGTTGGAATGGCCTTTGAGCCTCATTTCAGTGATCTCCGTAAAGGATTAACCAAAGTCACTTCCTTCATTATAATAATCGATGATGTCTATGATGTTTATGGGACCTTGGATGAGCTTGAGCTTTTCACCGCAGCTGTAGAAAG 1088 0.3869 MLLNSSSSIISNVHLAKHNEPVEPLISNHRIINSSRIRCVATTTAVVPPRKSANYQPNLWTFDFLQSLKHDYSDSIYEDLNGNLKEKVRRMIKQKEDNGEIWRHKLDLVNDVKRLGLSYHFEKEIEETLDRFVSSSGKFVNTNNLHETALSFRLLREYGYDVSPDVFEKFKDKKNNFKKSLTKDVKGMLSLYEASFLGYEGETILDEAKSFTTFHLKNLIINDENNVLLEQVKHALELPLHHRIQRLEARWYIEAYEKRRDANRILLEAAKLDFNVVQSTLQKDLQEISRWWKQVGVASKLSFSRDRLMECFFWTVGMAFEPHFSDLRKGLTKVTSFIIIIDDVYDVYGTLDELELFTAAVESWDIKAVQVLPDYMRICFLALYNTVNELAYDVLYKQGLDILPYLTRTWSDMLKAFLIEAKWCKEKNIPKFEEYLNNAWVSVSGVVILTHAYFLLNHNITKESLDSLHNYHDLLRGPSTIFRLCNDLGTSQAELQRGEAASSIICYMRENGASEECAHKYINNVLDETWKKMNKDRVTNSPFSKSFIETAMNLGRISQCTYQYGDAHGAPDASAKNRIRSLIIEPVSL 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01648 589 Coils Coil 77 97 - -
Arst3g01648 589 SFLD Terpene Cyclase Like 1 C Terminal Domain - Enzymatic 263 588 - -
Arst3g01648 589 SFLD Terpene Cyclase Like 1 C Terminal Domain - Enzymatic 263 588 - -
Arst3g01648 589 Gene3D Farnesyl Diphosphate Synthase 57 577 IPR008949 -
Arst3g01648 589 SFLD Terpene Cyclase Like 1 N-term 104 262 - -
Arst3g01648 589 SFLD Terpene Cyclase Like 1 N-term 104 262 - -
Arst3g01648 589 SFLD Isoprenoid Synthase Type I 263 588 - -
Arst3g01648 589 SFLD Isoprenoid Synthase Type I 263 588 - -
Arst3g01648 589 Pfam Terpene synthase family, metal binding domain 267 532 IPR005630 GO:0000287|GO:0010333|GO:0016829
Arst3g01648 589 Gene3D - 97 262 IPR036965 GO:0010333|GO:0016829
Arst3g01648 589 FunFam Isoprene synthase, chloroplastic 241 577 - -
Arst3g01648 589 Pfam Terpene synthase, N-terminal domain 60 236 IPR001906 GO:0010333|GO:0016829
Arst3g01648 589 SUPERFAMILY Terpenoid synthases 263 587 IPR008949 -
Arst3g01648 589 PANTHER OS04G0344100 PROTEIN-RELATED 50 568 - -
Arst3g01648 589 CDD Terpene_cyclase_plant_C1 50 586 IPR044814 GO:0010333|GO:0016102
Arst3g01648 589 FunFam Isoprene synthase, chloroplastic 102 262 - -
Arst3g01648 589 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 56 261 IPR008930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01648 Arst-Chr3 18349960 18352685 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01648 K12742 K19968 gmx:100782452 786.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g01648 3 18349960 18352685 Arst3g01648 3 18349960 18352685 ECH
Arst8g02183 8 30586571 30603648 Arst3g01648 3 18349960 18352685 PCT