Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01643 ATGCAGTTTTTTCACAAACCTACCAAGGTTCAGTCTCTGATTAATTTCATTCTAGTCACTACTTCATTTTGTGGCATATATGTTCTTGTATCAGTGTTGTTCTTGGGAACATCAAAGCTAGTACAATTTCATTCTTCATCAAAATACGTGTCAACACCAACACAAACAACTCTTGATCATGTTGTGTTTGGGATTGCATCAAGCAAAGGATCATGGCCTAAGAGAAAAGAGTTTGTTAAATTGTGGTGGAAACCAAACAATTCAATGAAGGGTTGTGTGTTCTTGGATACACTACCAGATGAAGAGAAGCAAGGTAGGGATGATAAGAATTCCCTCCCTCCTCTCTGTGTCTCCCAAGACACTTCCGGGTTTCGCTACACGTGCCACGGTGGCCTGAGGTCAGCCATACGTGTGGCACGTGTAGTTGCCGAAACAGTGGCCTTGAACCATTCAAACGTGAGGTGGTATGTGTTCGGAGACGACGACACCGTCTTCTTCCCGGAGAATGTGGTGAAGACACTTTCCAAGTATGATCATGAGCTATGGTACTATGTTGGTTCGCACTCTGAGGTTTATGAGCAGAATAGGTTGTTTGGTTTTGGAATGGCTTTTGGCGGCGCTGGTTTTGCTATCAGTTCTTCCCTTGCAAAGGTTTTAGCCAAGGTTTTTGATTCTTGTATTCAAAGGTACCATTTTCTCTATGGTAGTGATGGCAGGGTGTATTCTTGCTTAGCTGAACTTGGTGTTGGATTAACACATGAACCAGGTTTTCACCAGGTGGATTTGCGCGGAAATACCTTTGGCTTATTGGCTGCACATCCAGTGTCTCCATTGTTGTCCTTGCATCATCCAGAATACACTGATCCAATCTTTCCAAACATGACAACTACACAAGCTTTGAGACATTTCTTTGGAGCAGTGAATGTTGATTCTCAGAGGATGCTGCAACAAACAGTCTGCTATAACAGCAGGTTTTCGTGGACGATTTCCATGTCTTGGGGCTACACAGTTCAGGTTTTCCCTAACCATATGCCATTGAGAGAAGTTATCAAGGTTCAAGAAACATTCAAGCAGTGGAGAAAGGGAAACTTGTTGGCCAAGTCATTTACTTTCAACACTGTAGAGCCTCACCATGATCCATGTAAAAGGCCAACCATTTTCTTTCTTGATAGTGTTTCTTCCGGAAAAGATGGCATCATAAGCAGTTACAAGAGATCTTTCAGAAATTGCTCGAGCGACGCATCGTCACTGATGAGGTTGGAATGGATCAAAGTGGTCTCCGATAAGCTTGATCTTGGCATCAAACAGTTGAAGGCTCCAAGGAGGCACTGCTGTGATGTATTGCCATCAAGTGGTGGTGACCAGATGGAAATTGAAGTCAGAGAATGCAAAGATGAAGAATTGATTTATATGCACTGA 1419 0.4299 MQFFHKPTKVQSLINFILVTTSFCGIYVLVSVLFLGTSKLVQFHSSSKYVSTPTQTTLDHVVFGIASSKGSWPKRKEFVKLWWKPNNSMKGCVFLDTLPDEEKQGRDDKNSLPPLCVSQDTSGFRYTCHGGLRSAIRVARVVAETVALNHSNVRWYVFGDDDTVFFPENVVKTLSKYDHELWYYVGSHSEVYEQNRLFGFGMAFGGAGFAISSSLAKVLAKVFDSCIQRYHFLYGSDGRVYSCLAELGVGLTHEPGFHQVDLRGNTFGLLAAHPVSPLLSLHHPEYTDPIFPNMTTTQALRHFFGAVNVDSQRMLQQTVCYNSRFSWTISMSWGYTVQVFPNHMPLREVIKVQETFKQWRKGNLLAKSFTFNTVEPHHDPCKRPTIFFLDSVSSGKDGIISSYKRSFRNCSSDASSLMRLEWIKVVSDKLDLGIKQLKAPRRHCCDVLPSSGGDQMEIEVRECKDEELIYMH 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01643 472 FunFam Fringe-related protein-like 48 308 - -
Arst3g01643 472 PANTHER FRINGE-RELATED 18 469 - -
Arst3g01643 472 Gene3D - 49 304 - -
Arst3g01643 472 Pfam Protein of unknown function, DUF604 194 445 IPR006740 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01643 Arst-Chr3 18242947 18245493 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01643 10 437 Glycosyltransferase AT1G05280 52.414 2.54e-156 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01643 - - gmx:100784602 728.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g02169 8 30468911 30470933 Arst3g01643 3 18242947 18245493 PCT
Arst3g01643 3 18242947 18245493 Arst8g02170 8 30474571 30478724 PCT