Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01493 ATGGCAGAACCCAAAGTTAAGTATGATCGCCAACTCAGGATATGGGGTGAACAAGGACAGGCAGCACTTGAGAAATCTAGTATTTGCTTACTTAACTGTGGCCCTACTGGCTCTGAAACACTTAAGAATCTTGTTCTTGGTGGGATAGGAAGCATCACTGTAGTTGATGGATCTAAAGTTGAAGTGGGTGATCTTGGAAACAATTTTCTGGTGGATGAGTCAAGTGTCGGGCAGTCAAAGGCAAAATGTGTTAGCTCATTTCTTCAAGAGCTAAACGATTCTGTTAAAGCAAAATTTGTAGAGGAGTATCCAGAGGCATTGATTGAGACAAACCCATCATTCTTTTCTCAGTTTACTTTGGTCATTGCCACACAGCTTGTCGAAAGTTCAATGATAAAGCTTGATCGAATCTGCCGGGAGGCAAACGTTATTTTGATCTTTGCTCGTTCCTATGGCCTTACAGGGTTTGTTCGAATTAGTTTGAAGGAGCATACTGTCATCGAGTCAAAGCCTGAGCATTTTCTGGATGACCTCCGGTTAAATAATCCTTGGCTTGAACTAAAGAGTTTTGCAGACAGCATTGACTTGACTGTGCAAGATCCTGTTGCTCATAAGCACATACCATATGTTGTCATTCTTGTCAAGATGGCTGATGAGTGGGCCAAAAGCCATGGTGGTAAGCTCCCATCAACAAGAGAACAAAAAAAGGAGTTCAAGGATCTTTTGAAGGCCAGGATGGTTTCACAAGATGAAGATAATTATAAAGAAGCTATTGAAGCATCATTCAAAGTGTTTGCTCCCCGAGGAATTAGTTTGGATTTGCAGAGGATACTAAATGATAGTTCTTCTGAGGTGGACTCTAATTCATCAGATTTTTGGGTGTTGGTGGCTGCTCTGAAGGAATTCATTGCAAATGAAGGTGGTGGGGAGGCACCACTTGAAGGATCTATACCGGATATGACATCTTCCACCGAGCAATATATTAATTTGCAGAATATCTATCTAGCTAAGGCTGAGGCTGACTTTCTTGTAATGGAACAACTAGTGAGAAGTATCTTGAAGAAGATTGGTCGAGATTCAAATAGCATTCCAAAGGCAACAATTAGAAGTTTCTGTAAAAATGCAAGAAAACTCAGAGTTTGCAGGTACCGGTCAATTGAAGATGAATTTAATTCTCCAAACCTACCTGAGTTGCAGAAGTACCTAACTGATGAGGATAGCAGCATTGCTGTAGGAATTTATATTTTGCTTCGTGCTGTGGACCGGTTTGCTGCTAATTACAACAGTTTTCCTGGACAGTTTGACAGTGCAACGGATGAGGATATACCAAGATTGAAGAGCGCAGCTATTAGCCTCCTAAGTGACCTGGGATGCAATGGAACCGCTTTGGCTGAGGACCTCATCAATGAGATGTGTCGATTTGGTGCAGCAGAGCTTCATGCTGTGGCTGCTTTGGTTGGTGGAATTGCATCCCAAGAAGTGATCAAGCTCATAACAAGGCAGTTTGTACCGATGTCCGGAACCTACATCTTCAATGGCATTGACCACAAGTCACAGCTGTTGTCCCTGTAA 1572 0.4224 MAEPKVKYDRQLRIWGEQGQAALEKSSICLLNCGPTGSETLKNLVLGGIGSITVVDGSKVEVGDLGNNFLVDESSVGQSKAKCVSSFLQELNDSVKAKFVEEYPEALIETNPSFFSQFTLVIATQLVESSMIKLDRICREANVILIFARSYGLTGFVRISLKEHTVIESKPEHFLDDLRLNNPWLELKSFADSIDLTVQDPVAHKHIPYVVILVKMADEWAKSHGGKLPSTREQKKEFKDLLKARMVSQDEDNYKEAIEASFKVFAPRGISLDLQRILNDSSSEVDSNSSDFWVLVAALKEFIANEGGGEAPLEGSIPDMTSSTEQYINLQNIYLAKAEADFLVMEQLVRSILKKIGRDSNSIPKATIRSFCKNARKLRVCRYRSIEDEFNSPNLPELQKYLTDEDSSIAVGIYILLRAVDRFAANYNSFPGQFDSATDEDIPRLKSAAISLLSDLGCNGTALAEDLINEMCRFGAAELHAVAALVGGIASQEVIKLITRQFVPMSGTYIFNGIDHKSQLLSL 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01493 523 FunFam NEDD8-activating enzyme E1 regulatory subunit 1 274 - -
Arst3g01493 523 CDD APPBP1_RUB 7 521 - -
Arst3g01493 523 Gene3D - 2 267 - -
Arst3g01493 523 Gene3D - 356 523 - -
Arst3g01493 523 PIRSF APP-BP1 1 523 IPR030667 GO:0019781|GO:0045116
Arst3g01493 523 FunFam NEDD8-activating enzyme E1 regulatory subunit 361 523 - -
Arst3g01493 523 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 7 519 IPR035985 GO:0008641
Arst3g01493 523 Pfam ThiF family 8 501 IPR000594 -
Arst3g01493 523 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 2 505 IPR045886 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01493 Arst-Chr3 13685719 13692372 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01493 7 195 EF-hand Containing Proteins AT2G30110 24.121 5.51e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01493 K04532 - gmx:100793799 939.488
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g01493 3 13685719 13692372 Arst3g01493 3 13685719 13692372 ECH