Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01491 ATGATCAACGGAAACAAGATGCGAGCGGCATTCATAATTGCGACTGTAACAGCAATCTCCATCTTCTTAACCGCAATGAACCGCAGAAGAATTCGTAACCGTAACAAGAAATCGCCTTCGAGTTCGTGTTATTTACATTCCGAACCGAAGCCGCAGAGTTCCTTTAAGCGCGTCTTGGCGGATAATTCTTACACTCCTTTCAAGCACTTGAAGAATCCCAACGACTCTTCTAACAATGATAAAGCTTCAAATTTGCATCCATTTGAGGCAGCGATCACAGCATTGTTGAAAAATTCTTGGCCTGAAATTCAACTTACTACTGAGATTGTGGACATGGAAATGAATGATTCTTATGTTTGGGTCAATACAGAGCTGCAAGTAAAGGAATTGGCCAATGTGTTAAGCAAAGAGAGGTTCTTTGCTGTGGACACAGAACAACATAGCTTACGATCTTTTCTAGGTTTTACAGCATTGGTTCAGATTTCTACCCAGAAGAAAGATTATTTGGTTGACACAATCGCGCTACATGATCTAATGCCAATTCTTTGCCCAGTTTTTGCGGATCCTTCTATTTGTAAAGTGTTCCATGGAGCTGACAATGATGTTGTCTGGCTACAAAGGGACTTCCATATATATGTTGTTAATCTATTTGATACTTCAAAGGCATGCGAGGTGCTGTCGAAGCCACAGAAATCACTTGCTTATCTACTTGAAACTTACTGCAGTGTGACAACAAATAAATTATTACAGCGTGAAGACTGGAGACAGCGCCCCCTCTCAGCAGAAATGGTGCATTATGCACGAACAGATGCACACTATTTGTTGTATATTGCAAGCTGTTTGATTGCTGAACTCAAACAACTTGACAATGAAAACTCTTGTGACGATGACAAATTCCATTTTGTTCACGAGGCTAGTCGGCGTTCAAACATAACGTGTTTGCAACTTTATACAAAAGAAGTTGAAGCTTCTCCTGGTGATTCTGCTGCATCATCATTATTTTCTCGTCATGTGAGTGGTCAAGGCTTCACTTCAGTTTCCAATGAAACCCAGTTTCAGACTATTGTGAAGCAACTGTGTGGATGGAGAGACCTGATGGCTCGTATTCATGATGAGAGCTTAAAATATGTACTGTCTGACCAGGCAATTGTTGCTTTGGCAAGTCAACCTTTGTCAAGTGAATCCGAAATATACAATCTCATAGCTCAGGCTGATAACAATGTGGAAATGGGTCTCAATTTTTTCATCCATTCCCCATCTCCTGTTGTTTGCAGCCACTTGAGTGATATCCATCATATTCTTGCAGACAAGTTGATTAACCATGATCACATTTATTCATGGATTATTCAGAAGTGCCTGGGTCCAAATGGGACTTGTCCACTTTCTATATTTAATTATGCTTTGCTGTTTAACAGCAACTTAAAACCTAGTTTAGCTTATAAACCCTCTGGTCTAAAGAATCATAGACAGATATCCCGGAAAGCTTCTCGAGATTTGTTTGTCCAAAAATTCTCCTGTAAGGCTCCTGTTTATCATAACTGCCGGATATTTGCTAATGATGGGAGGCTGCTTTGTTACTGTGATAAGAAGAAGCTTGAGTGGTACCTAAGTCGGGATCTCGCAAAACTTGTTGATAAGGACCCACCGGCTATAATGCTTCTATTTGAACCCAAAGGTCGCCCAGAGGATGAAGACAATGATTTCTACATTCAGAGTAAGAGAAATATATGTGTTGGATGTGGTGAAGGAAGTCACTACTTACGGTACCGAATAATCCCATCCTGTTACAGAATGCATTTTCCTGAGCATTTAAAAAGCCATCGTTCTCATGATATTGTTCTACTCTGCGTGGATTGCCACGAAATTGCCCATGCGGCTGCAGAGAAGTACAAGAGAAAAATAGCTTCCGAGTTTGGAATTCCTCTGTACGTTCAAAGGGTCGTTCATCCTGAACAAGAGCCTAATGTACAGATTGAGGAGGGTGTATCTCCATTACAGTTACGTATAGCAGCTATGGCTCTTATACGCCATGGACCAAGAATGCCTCAAAATCGCCGTGAAGAACTGACTGAGTTTGTTTTGCAGGTTGTGAAGAGATATTATGGAGGAAGGGAAATATCTGAGGAAGATCTAGAAAGAGCTCTGATAGTTGGCATGAGTCCTCATGAGAGAAGACGGTTTGAGAAGAAGAGGGGTTTCTCTTTCAGACATGTGGGTAAAATAACAGCAGTGTCTGAAGAGGAAAACCCTGCTGATTCCACAACCAGAATTAGTAATGGGGATGCATCAAAGTTTGGTTCCCTTGATGATGGTTCATGTGCAAATGAAGAAACAAGTAATGATGTAGATAGAGAACATTTGATGGTAAACGATGATTCAGGAAACCCTTCTTTAGCTTCTGATCTTGCAGTGGATGCATCTGTCTCTCCTGCTACTAAAAATGGGTACACAAGCTCATTTGAAATTGTGGATTATAGTGAAATTAGTGACTCTGCTACAAATGTTGATGGCACTAGTCTGAGTAAAAAGCAACCAAATGGAAGTGATGACTTATCTTATCCTCCCAAGGATGAAGAATCGACTCAAACTAAACATAATTCAAAACAATCACTCTTAGGACATGGACCGCATGGACAACAAGTTGTAGAACATTTAATGAAGGAATATGGGGAAGAAGGCATTGGACAATTCTGTCAACGGTGGAGACAAGTATTTGTTGAAGCTGTAAATCCACGTTTTCTTCCTGCTGGTTGGGATGTAAAACACAGCGGAAGAAGGGACTTCGGTGAGTTCAGTGTATACAATCCTGGCAGAAGAGTTGGCGCTACTACTTAG 2835 0.4088 MINGNKMRAAFIIATVTAISIFLTAMNRRRIRNRNKKSPSSSCYLHSEPKPQSSFKRVLADNSYTPFKHLKNPNDSSNNDKASNLHPFEAAITALLKNSWPEIQLTTEIVDMEMNDSYVWVNTELQVKELANVLSKERFFAVDTEQHSLRSFLGFTALVQISTQKKDYLVDTIALHDLMPILCPVFADPSICKVFHGADNDVVWLQRDFHIYVVNLFDTSKACEVLSKPQKSLAYLLETYCSVTTNKLLQREDWRQRPLSAEMVHYARTDAHYLLYIASCLIAELKQLDNENSCDDDKFHFVHEASRRSNITCLQLYTKEVEASPGDSAASSLFSRHVSGQGFTSVSNETQFQTIVKQLCGWRDLMARIHDESLKYVLSDQAIVALASQPLSSESEIYNLIAQADNNVEMGLNFFIHSPSPVVCSHLSDIHHILADKLINHDHIYSWIIQKCLGPNGTCPLSIFNYALLFNSNLKPSLAYKPSGLKNHRQISRKASRDLFVQKFSCKAPVYHNCRIFANDGRLLCYCDKKKLEWYLSRDLAKLVDKDPPAIMLLFEPKGRPEDEDNDFYIQSKRNICVGCGEGSHYLRYRIIPSCYRMHFPEHLKSHRSHDIVLLCVDCHEIAHAAAEKYKRKIASEFGIPLYVQRVVHPEQEPNVQIEEGVSPLQLRIAAMALIRHGPRMPQNRREELTEFVLQVVKRYYGGREISEEDLERALIVGMSPHERRRFEKKRGFSFRHVGKITAVSEEENPADSTTRISNGDASKFGSLDDGSCANEETSNDVDREHLMVNDDSGNPSLASDLAVDASVSPATKNGYTSSFEIVDYSEISDSATNVDGTSLSKKQPNGSDDLSYPPKDEESTQTKHNSKQSLLGHGPHGQQVVEHLMKEYGEEGIGQFCQRWRQVFVEAVNPRFLPAGWDVKHSGRRDFGEFSVYNPGRRVGATT 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01491 944 Pfam 3'-5' exonuclease 118 284 IPR002562 GO:0003676|GO:0006139|GO:0008408
Arst3g01491 944 ProSiteProfiles HRDC domain profile. 349 429 IPR002121 GO:0003676
Arst3g01491 944 MobiDBLite consensus disorder prediction 747 762 - -
Arst3g01491 944 Gene3D - 48 323 IPR036397 GO:0003676
Arst3g01491 944 PANTHER POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED 32 936 IPR045092 GO:0000175|GO:0000467
Arst3g01491 944 MobiDBLite consensus disorder prediction 834 848 - -
Arst3g01491 944 MobiDBLite consensus disorder prediction 745 800 - -
Arst3g01491 944 SUPERFAMILY Ribonuclease H-like 50 288 IPR012337 -
Arst3g01491 944 SMART 35exoneu6 118 286 IPR002562 GO:0003676|GO:0006139|GO:0008408
Arst3g01491 944 FunFam Polynucleotidyl transferase ribonuclease H fold protein with HRDC domain 49 323 - -
Arst3g01491 944 MobiDBLite consensus disorder prediction 834 876 - -
Arst3g01491 944 Gene3D HRDC domain 343 443 IPR044876 -
Arst3g01491 944 SUPERFAMILY HRDC-like 350 401 IPR010997 GO:0000166|GO:0044237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01491 Arst-Chr3 13678115 13685153 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01491 K12951 - gmx:100791485 1363.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g01491 3 13678115 13685153 Arst3g01491 3 13678115 13685153 ECH