Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01462 ATGGGTTTTCGGTTACCTGGTATTGTAAGAAAGGCATCATTTACTTCATCTTCAAAAGCTATGGAAATTCCAAAAGGTTATCTTGCAGTTTATGTTGGAGAGAAAATGAAGCGGTTTGTGATCCCCATATCATACTTGAACCAGCCTTCATTTCAAGACTTGCTAAGTCAAGCTGAGGAAGAATTTGGATATGATCATCCAATGGGTGGTCTCACAATTCCTTGTGAAGAAAATATGTTCTTAGATATCACTTCAAAAATGGGTTTCCGTTTACCTGTTATTCGAAGGACATCGTCATTCTCAGCTAGCCAAGCAACTTGTAAATCTGTGGAAGTCCCAAAGGGGCATTTAGCAGTGTATGTCGGAGAGAAACAGAAGCGGTTTGTGATCCCCATTTCATACCTGAACCAACCTTCAATTCAAGACTTGTTGAGCCAAGCGGAGGAAGAGTTCGGATATGATCATCCTATGGGAGGTCTAACAATTCCTTGCAGTGAATATGTCTTCCAACAAATCACTTCTCACTTGGATTGA 534 0.4045 MGFRLPGIVRKASFTSSSKAMEIPKGYLAVYVGEKMKRFVIPISYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCEENMFLDITSKMGFRLPVIRRTSSFSASQATCKSVEVPKGHLAVYVGEKQKRFVIPISYLNQPSIQDLLSQAEEEFGYDHPMGGLTIPCSEYVFQQITSHLD 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01462 177 Pfam Auxin responsive protein 16 84 IPR003676 GO:0009733
Arst3g01462 177 Pfam Auxin responsive protein 98 175 IPR003676 GO:0009733
Arst3g01462 177 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 15 86 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01462 Arst-Chr3 13144624 13147820 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01462 22 80 Calmodulin-binding Proteins AT3G43120 55.932 4.80e-18 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01462 - K14488 pcin:129286196 236.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g01462 3 13144624 13147820 Arst3g01462 3 13144624 13147820 ECH