Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01449 ATGGATTGTTACATCCATGGCACCTTCTTCATCATCCTCATTTTCTTCTTCTCCAATACCCCAACTACATTTTCATCACCATCGCCATCATCATCTTCTTCTTCGTCACCAACGGCTCAGATCAATTCAAACTCCATCTTGGTGGCACTACTGGACTCACATTACACAGAGCTGGCAGAATTGATTGAAAAAGCCATGCTTTTGCCGACGCTCGAAGAAACCGTGGCAAACCACAACATCACCATTTTTGCCCCAAAGAACGAAGCTTTGGAGCGAAACCTTGACCCCGAATTCAAGCGCTTCCTCTTGGAACCCAGAAACCTCAAATCTCTTCAGACACTCATCATGTCACACATCGTCCCAACCCGAATCAATTCCGAACGCAAACCCGGGTCGACCCGACACAAAACTCTCGCCGCCGACAACCATCACATCCAAATCAGCGCCAATTCCACCGTTGAATTCACCGTCGACGGCGCACGGGTCACCCACCCGGAAACTATAACCCGACCCGACGGAGTGATCCACGGAATCGACTCGCTCCTGATTCCACGCTCAGTCCAATCAGACTTCAGCAACCGCCGGAGCCTGCGCTCGATCGGCGCCGTGAAACCAGAAGGAGCACCGGAGGTCGATCCCCGAACTCACCGCCTGAAAAAACCAGCACCACCGTCAAAACCAGGTTCCCCACCGGCACTCCCGATCTACGACGCAATGGCACCAGGTCCGGCAATTGCTCCGGCGCCTGCACCAGGACCCGGAGGAAAACACCACCACTTCGACGGCGAAGCACAGGTGAAAGATTTCATCCAAACCCTAATCCAGTACGGCGGCTACAACGAAATGGCAGACATATTGGTAAACCTAACTTCTCTGGCAACCGAAATGGGTCGTTTAGTCTCAGAAGGTTACGTTCTAACGGTTTTGGCGCCAAACGACGAAGCGATGGCGAAATTGACTACGGAACAGTTGAGTGAACCAGGTGCACCGGAGCAGATTATGTATTACCATTTGATCCCTGAGTACCAAACGGAGGAATCGATGTACAATGCCGTTAGAAGGTTCGGGAAGGTTCGCTACGATACGCTTAGGGTTCCGCATAAGGTTGTGGCGGAGGAAGGTGATGGTTCTGTCAGGTTTGGCCGTGGCGATGACGCTGCATTTTTGTTTGATCCTGATATCTATACGGACGGGAGGATCTCCGTTCAGGGGATTGATGCCGTGATGTTTCCGCCGGAGACGGCGGAGGAGAAGGCTGAGAAGGAGAATCAGGTTTTTAGGCGGGTCGCGAAAACGGGTCAGCCCGGGAAGGTAACGGTCAAGAAGCAGAGGAGAGGAAAATTGATGGAAACAGCATGCTGGATGCTTGGAACCTTTGGACAGCACTCTAGATTTGCCTCTTGCCAATAA 1410 0.5206 MDCYIHGTFFIILIFFFSNTPTTFSSPSPSSSSSSSPTAQINSNSILVALLDSHYTELAELIEKAMLLPTLEETVANHNITIFAPKNEALERNLDPEFKRFLLEPRNLKSLQTLIMSHIVPTRINSERKPGSTRHKTLAADNHHIQISANSTVEFTVDGARVTHPETITRPDGVIHGIDSLLIPRSVQSDFSNRRSLRSIGAVKPEGAPEVDPRTHRLKKPAPPSKPGSPPALPIYDAMAPGPAIAPAPAPGPGGKHHHFDGEAQVKDFIQTLIQYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTEQLSEPGAPEQIMYYHLIPEYQTEESMYNAVRRFGKVRYDTLRVPHKVVAEEGDGSVRFGRGDDAAFLFDPDIYTDGRISVQGIDAVMFPPETAEEKAEKENQVFRRVAKTGQPGKVTVKKQRRGKLMETACWMLGTFGQHSRFASCQ 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01449 469 MobiDBLite consensus disorder prediction 198 260 - -
Arst3g01449 469 Pfam Fasciclin domain 54 184 IPR000782 -
Arst3g01449 469 Pfam Fasciclin domain 291 410 IPR000782 -
Arst3g01449 469 SMART fasc_3 81 185 IPR000782 -
Arst3g01449 469 SMART fasc_3 307 412 IPR000782 -
Arst3g01449 469 Gene3D FAS1 domain 46 185 IPR036378 -
Arst3g01449 469 ProSiteProfiles FAS1/BIgH3 domain profile. 266 409 IPR000782 -
Arst3g01449 469 FunFam Fasciclin-like arabinogalactan protein 16 261 412 - -
Arst3g01449 469 SUPERFAMILY FAS1 domain 43 185 IPR036378 -
Arst3g01449 469 Gene3D FAS1 domain 285 412 IPR036378 -
Arst3g01449 469 SUPERFAMILY FAS1 domain 244 413 IPR036378 -
Arst3g01449 469 MobiDBLite consensus disorder prediction 223 237 - -
Arst3g01449 469 ProSiteProfiles FAS1/BIgH3 domain profile. 42 182 IPR000782 -
Arst3g01449 469 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 9 463 IPR044654 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01449 Arst-Chr3 13007470 13011771 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01449 - - adu:107477699 847.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g02096 8 29617456 29620236 Arst3g01449 3 13007470 13011771 PCT