Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01366 ATGGAAGACATTGAAGATTTGCTCATTGGAACCGCAACCGGAACTCCACCGGGATTCCGGTTGCCGCTGGCTGCTTCTGTTGCAACAAAGACCAACTCCAATAGAAGGAATCCGAATCAGAAGCAAAGGACGCAACTCGCTACTGCAACTCCGTCTCCAATCCCTGGCACTCAGACTATCTACATCAAGACCTTCGGATGCTCCCACAACCAGAGCGACAGTGAATACATGGCTGGTCAGCTATCTGCTTTTGGCTATTCCTTCTCTGATAATCCCGATCAAGCAGATCTCTGGCTCATCAACACTTGTACGGTAAAGTCTCCAAGCCAATCTGCTATGGATACCATTATAGCCAAAGGAAAATCTTCAAACAAGCCGCTTGTTGTTGCGGGATGTGTCCCTCAGGGAAGTCGAGGCTTGAAAGAGCTTGAGGGGATCAGCATTGTCGGGGTCCAGCAAATTGATCGCGTCGTTGAAGTTGTGGAGGAGACCTTAAAAGGTCATGAAGTCAGGCTCTTGACCCGCAAGACTTTGCCCGCACTTGACCTCCCTAAGGTTAGAAAGAACAAGTTTGTTGAGATTCTTCCTATTAATGTTGGTTGTTTAGGTGCTTGCACGTATTGCAAGACAAAGCATGCTCGGGGTCACCTAGGTAGTTACACTATAGACAGCCTTGTAGGGCGTGTAAAATCCGTCATAGCTGATGGAGTTAGGGAGATCTGGCTGAGCAGTGAAGACACTGGGGCATATGGTCGTGACATCGGTGTCAATCTTCCAACTTTATTGAATGCTTTAGTAGCAGAACTCCCACCTGACGCAAGCACAATGTTACGTATTGGAATGACCAATCCACCCTTTATCCTTGAGCACTTGAAAGAGATAGCAGAAACTTTGCGGCATCCATGTGTGTACTCATTTTTGCATGTACCAGTTCAGTCTGGAAGTGATGCTGTTCTGACGGCAATGAATCGAGAATATACTGTGGGTGAGTTCAGGACTGTTGTAGATACCTTAATGGAGTTGGTGCCAGGGATGCAGATTGCCACTGACATAATATGTGGATTTCCTGGTGAAACTGATGAAGATTTTGAACAAACTGTTAACCTTGTTAAAGAGTACAAATTCTCTCAAGTTCATATTTCACAATTTTATCCTCGACCAGGGACCCCGGCTGCAAGGATGAAAAAGGTTCCAAGTAATGTGGTGAAGAGTAGAAGCCGTGAACTTACAAATGTCTTTGAAGCCTTCACACCATATACCGGGATGGAAGGCAAAGTGGAGAGAATTTGGATTTCTGACATTGCATCAGATGGAGTTCACTTGGTTGGTCATACGAAGGGATATATACAAGTTCTTGTAATTGCTCCAGACCATATGCTAGGTACTTCAGCTATTGTTAAGATAACATCCTGTGGAAGGTGGTCAGTTTTTGGGGAAGTAATCGACACGCTCAACCTCAACCAAGTGAGGACTAATAAAGCTTCAAGCAAGGAGACTCCTAATCAAGATGCGCCTTCTCTATGCTGTAGGCCAGCCAGTGTTGGATCCTCCTTGCAAGAACCAGAATCTTGTGCTTGTGGAAACGATAGCTGCTGTGCTAAGAGTACTCACGCGAATAGTGATAACACGAGTAGCGATGTAGTGCCACAAAATCAGAACGGTAGAAATTTCATTGGGTGGGTACTGAGGAAGCGGAAGCATTTGCTCCACAAAAAGTTTGACAGCAGTGAGTTAGGTTCTGTTAAAAAGGAACATGGAAGCTCGAGGAAGTGGGACTTTATTGATAAGGCTCTTTTGGGTGGAATATCGTTTAGCATCTTCATTATTGCTGTAGTAGTAGTTGCCCTTAGTTTTAGGATATGGTCCCAATAA 1872 0.4509 MEDIEDLLIGTATGTPPGFRLPLAASVATKTNSNRRNPNQKQRTQLATATPSPIPGTQTIYIKTFGCSHNQSDSEYMAGQLSAFGYSFSDNPDQADLWLINTCTVKSPSQSAMDTIIAKGKSSNKPLVVAGCVPQGSRGLKELEGISIVGVQQIDRVVEVVEETLKGHEVRLLTRKTLPALDLPKVRKNKFVEILPINVGCLGACTYCKTKHARGHLGSYTIDSLVGRVKSVIADGVREIWLSSEDTGAYGRDIGVNLPTLLNALVAELPPDASTMLRIGMTNPPFILEHLKEIAETLRHPCVYSFLHVPVQSGSDAVLTAMNREYTVGEFRTVVDTLMELVPGMQIATDIICGFPGETDEDFEQTVNLVKEYKFSQVHISQFYPRPGTPAARMKKVPSNVVKSRSRELTNVFEAFTPYTGMEGKVERIWISDIASDGVHLVGHTKGYIQVLVIAPDHMLGTSAIVKITSCGRWSVFGEVIDTLNLNQVRTNKASSKETPNQDAPSLCCRPASVGSSLQEPESCACGNDSCCAKSTHANSDNTSSDVVPQNQNGRNFIGWVLRKRKHLLHKKFDSSELGSVKKEHGSSRKWDFIDKALLGGISFSIFIIAVVVVALSFRIWSQ 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01366 623 ProSiteProfiles Radical SAM core domain profile. 187 419 IPR007197 GO:0003824|GO:0051536
Arst3g01366 623 NCBIfam MiaB/RimO family radical SAM methylthiotransferase 59 476 IPR005839 GO:0006400|GO:0016740|GO:0051539
Arst3g01366 623 ProSitePatterns Methylthiotransferase radical SAM domain signature. 195 215 IPR020612 GO:0051539
Arst3g01366 623 ProSiteProfiles TRAM domain profile. 420 482 IPR002792 -
Arst3g01366 623 PANTHER RADICAL SAM PROTEINS 1 619 - -
Arst3g01366 623 SFLD Radical SAM 139 422 IPR007197 GO:0003824|GO:0051536
Arst3g01366 623 FunFam threonylcarbamoyladenosine tRNA methylthiotransferase isoform X2 191 421 - -
Arst3g01366 623 SMART MiaB 191 415 IPR006638 GO:0003824|GO:0051536
Arst3g01366 623 Pfam Radical SAM superfamily 198 370 IPR007197 GO:0003824|GO:0051536
Arst3g01366 623 Gene3D - 59 178 IPR038135 -
Arst3g01366 623 Pfam Uncharacterized protein family UPF0004 60 137 IPR013848 GO:0035596|GO:0051539
Arst3g01366 623 SUPERFAMILY Radical SAM enzymes 181 415 - -
Arst3g01366 623 Gene3D tm_1862 like domain 189 419 IPR023404 -
Arst3g01366 623 CDD Radical_SAM 195 399 - -
Arst3g01366 623 NCBIfam tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase 60 481 IPR006466 GO:0035598|GO:0035600
Arst3g01366 623 MobiDBLite consensus disorder prediction 29 53 - -
Arst3g01366 623 FunFam threonylcarbamoyladenosine tRNA methylthiotransferase 59 178 - -
Arst3g01366 623 ProSiteProfiles Methylthiotransferase N-terminal domain profile. 58 166 IPR013848 GO:0035596|GO:0051539
Arst3g01366 623 SFLD B12-binding domain containing 139 422 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01366 K15865 - gmx:100798865 954.896