Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01360 ATGGCTGAGGAACCACAGAAACCAGCTGAGGAAGTGGTGGCCGCCGTAGCTCAGCCTGAGACGGAGGCCCAGCCGGACAAACCTGTTCCTGAGACAGATAAGGAGACACATGCCGATAAGGCAGAGGCGGCAGTGCCTGAGGCTGAGAAGAAGGAGGGCGATGCTGTTGTAGTGACAGAGAAGGCAGTGGAAGGAGAAGCGGCGGAGTCGGAGGCGGAGAAGCCCGTTGAAGGGAAGAATCAGATAGCGCAATCGGTGTCTTTCAAGGAGGAGAGCTACGTGGTTGGCGACCTCCCCGAAGCACAGAAGAAGGCTCTCGATGACCTCAAGAACCTCATTCAAGAAGCCCTCAATAAGCACGAGCTCTCCTCTCCTCCTCCCCCTCCACCGCCAAAAGAAGAAGACAAGAAGAAAGAAGAGGCCGTTGCAGCTGCCGAAGAGAAGAAGGAAGAGGCAGAAGAGAAGAAGGAGGAAGCTGCAGCAGCCGAGGAAGAGAAGAAGGAAGAGGTGGTAGCAGCTGAGGAGAAGAAGGAAGAGGTGGTAGCGGCAGCCGAAGAAGAGAAGAAGGAGACGGTAGAAGCCATAGAGGAGAGCGTAGTGTCAGTGAAAGTGGAGGAAGAAGGTCCTTCAAGTTCAGCAGTAGCCGTGGAGGAGGAGAAGAAGGAAGAAGCGGCAGCTCCTCCTCCGCCGCAAGCTCCAGAGGAAGTGTCGATATGGGGAATCCCACTGCTGGCAGACGAGAGGAGTGACGTCATCCTGCTCAAGTTCCTGAGAGCGAGGGACTTCAAGGTGAAGGACGCCTTCACGATGATCAAGAACACCGTCCGATGGCGCAAGGAATTCGGAATCGATTCCCTGATCGAGGAAGATCTCGGAAGCGATTGGGACAAGGTGGTGTTCACTCAAGGGGTCGATAAAGAAGGGCACCCGGTGTGCTACAACGTCTTCGGAGAATTCGAGAACAAGGAGCTTTACCAGAAGACGTTCTCCGACGAGGAGAAGCGCCAGAAGTTCATCAGGTGGAGGATCCAGCTTCTGGAAAAGAGCGTCAGGAAGCTTGACTTCAGTCCGAGAGGGATCTCCACCATCGTGCAGGTCAACGATCTCAAGAACTCACCTGGACAACTGAGCAAGAGGGAGCTCAGGCAGGCTACTAACCAGGCCCTCCAACTGCTTCAGGATAACTACCCTGAGTTTGTTGCCAAGCAGGTGTTTATCAATGTGCCATGGTGGTACCTTGCCTTTTCAAGGATGATAAGTGCTTTCCTGACCCAGAGGACCAAGAGCAAATTTGTATTTGCTGGACCATCCAAGTCTGCTGAAACCCTTTTCAAGTACATAGCCCCGGAGCAAGTGCCGGTTCAATACGGTGGACTAAGCAGAGAGGGTGAGCAAGAATTCAGTACCGCCGATCCTGTTACAGAGGTTACAATCAAACCAGCAACAAAGCACACCGTCGAGTTCTCATTTGCTGAGAAGAGCCACCTTGTCTGGGAGCTTAGAGTTGTGGGTTGGGATGTGAGCCACGGGGCTGAATTTGCGCCCAGCGCCGACGATGGATACACGGTGATAGTACAGAAGAGCAGGAAAATCGCCCCGGCGGATGAAACAGTGATTTGCAACAGCTTCAAAGTGGGTGAACCTGGCAAGGTCGTGCTCACCATCGATAACCAAACATCCAAGAAGAAGAAACTCCTCTACAGGTCCAAGACCACACCCATCTCTGAATAG 1731 0.5338 MAEEPQKPAEEVVAAVAQPETEAQPDKPVPETDKETHADKAEAAVPEAEKKEGDAVVVTEKAVEGEAAESEAEKPVEGKNQIAQSVSFKEESYVVGDLPEAQKKALDDLKNLIQEALNKHELSSPPPPPPPKEEDKKKEEAVAAAEEKKEEAEEKKEEAAAAEEEKKEEVVAAEEKKEEVVAAAEEEKKETVEAIEESVVSVKVEEEGPSSSAVAVEEEKKEEAAAPPPPQAPEEVSIWGIPLLADERSDVILLKFLRARDFKVKDAFTMIKNTVRWRKEFGIDSLIEEDLGSDWDKVVFTQGVDKEGHPVCYNVFGEFENKELYQKTFSDEEKRQKFIRWRIQLLEKSVRKLDFSPRGISTIVQVNDLKNSPGQLSKRELRQATNQALQLLQDNYPEFVAKQVFINVPWWYLAFSRMISAFLTQRTKSKFVFAGPSKSAETLFKYIAPEQVPVQYGGLSREGEQEFSTADPVTEVTIKPATKHTVEFSFAEKSHLVWELRVVGWDVSHGAEFAPSADDGYTVIVQKSRKIAPADETVICNSFKVGEPGKVVLTIDNQTSKKKKLLYRSKTTPISE 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01360 576 MobiDBLite consensus disorder prediction 111 175 - -
Arst3g01360 576 SUPERFAMILY CRAL/TRIO domain 298 460 IPR036865 -
Arst3g01360 576 Coils Coil 134 194 - -
Arst3g01360 576 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 288 464 IPR001251 -
Arst3g01360 576 ProSiteProfiles GOLD domain profile. 440 571 IPR009038 -
Arst3g01360 576 SMART sec14_4 292 461 IPR001251 -
Arst3g01360 576 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 473 571 IPR036598 -
Arst3g01360 576 SUPERFAMILY CRAL/TRIO N-terminal domain 94 290 IPR036273 -
Arst3g01360 576 Gene3D GOLD domain 464 572 - -
Arst3g01360 576 MobiDBLite consensus disorder prediction 26 76 - -
Arst3g01360 576 PANTHER PATELLIN-1 136 573 IPR044834 GO:0008289
Arst3g01360 576 MobiDBLite consensus disorder prediction 1 95 - -
Arst3g01360 576 Pfam CRAL/TRIO domain 297 458 IPR001251 -
Arst3g01360 576 Gene3D - 215 280 - -
Arst3g01360 576 SMART CRAL_TRIO_N_2 249 274 IPR011074 -
Arst3g01360 576 CDD SEC14 294 459 IPR001251 -
Arst3g01360 576 MobiDBLite consensus disorder prediction 130 175 - -
Arst3g01360 576 Gene3D - 293 463 IPR036865 -
Arst3g01360 576 MobiDBLite consensus disorder prediction 203 234 - -
Arst3g01360 576 Pfam CRAL/TRIO, N-terminal domain 221 273 IPR011074 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01360 Arst-Chr3 11665558 11668465 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01360 253 453 Acyl Lipid Metabolism Gene Families AT1G55840 28.837 7.71e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01360 K19996 - qsa:O6P43_029975 605.52