Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01318 ATGTTATTAACGGTGACAGAGAGAAGCAGGGGTCACGATTATGGAGATGCATTATCGAAGAGTATATTGTTCTTTGAAGCTCAGAGGTCAGGGAAGTTGCCACCAACACAGAGGGTTACTTGGAGGAAGGATTCCGCCGTCCACGACGGCGATCAATTTCAGGAAGGCGTGTCCCACTTGTACCGCAAAGTTGACTTGGTTGGCGGTTACTACGACGCGGGCGACAACGTGAAGTTCAACTTTCCAATGGCATTCTCAACAAGCATGCTAGCATGGAGTGTGATACAGTTCGGGAGTTCCATGGGAGCAGAACGAAAGCACGCTTTAGAGGCTATTCGTTGGGGCGCGGAGTACTTGATGAAAGCAACTAGCGTCCCTGGCTATGTGGTTGTACAGGTTGGTGATCCGTACAGTGACCACAATTGTTGGCAGAGGCCTGAAGACATGGACACTTCTAGAACCTTCTATGCGGTTAGCAAGGAGTACCCTGGTTCTGAGGTTTCCGCGGAGATTGCAGCTGCGCTTGCAGCCTCTTCCATTGTCTTTAAACGATATCAACTTGCTTATTCTGCTAGGCTTCTCCGAAGAGCTAGAATGGTGTTTGAGTTTGCAGATAAGTACAGAGGATCTTACAATGACGGCCTTGGACACTGGGTATGCCCATTCTATTGTGATTATAGTGGCTACCAGGATGAATTGGTGTGGGGAGCAGCATGGTTGTTTAAGGCTACTAAAAACTCTTATTATCGGAAATACATTGACGAAAACATTCACAACCTCAAAACCTTCGCTGAATTTGGATGGGACTCCAAGGATGCTGGCATCAATGTGCTTCTTTCTACGCTTATGATTAATAATAGTAGTAACTCTAATGCGGACAAGTTTATCTGTTCTGTGCTACCTGAATCACCTTCCCTATCAGTTTCATACTCTCCAGGAGAGCTTATGTTCAAACAAGGAGGGAGTAACTTGCAACATGCAACGGCATTTTCATTTCTTTTCCTGGTTTATGCTGACTATTTGAACAAAGTTAATAGACACGTTGACTGTGGGGGTAAAGCTTCTGCAATATCCCCAACGCGACTTATACAATTTGCCAGAAGTCAGGTGGATTACATATTAGGAAGCAACCCATTGAAGATGTCATACATGGTAGGGTACGGAGAAAAGTATCCAAAAAGAATACATCACCGTGCATCTTCATTACCTTCCATAGATATGCAGCGTGGCCACATCGATTGCAAAGGAGGATCCTCTTATTTTCAAAGCCAAAACCCTAATCCCAATGTCCTTCTTGGAGCTCTAGTTGGGGGACCTGATATCAATGATCAATATGCTGATTCTCGATCCGATTTTGTGCACTCAGAACCTACAACCTATATAAATGCACCTTTTGTTGGTGCTTTGGCATATTTCAAATCACATTCATCCTCAAAACCAAATTAA 1446 0.444 MLLTVTERSRGHDYGDALSKSILFFEAQRSGKLPPTQRVTWRKDSAVHDGDQFQEGVSHLYRKVDLVGGYYDAGDNVKFNFPMAFSTSMLAWSVIQFGSSMGAERKHALEAIRWGAEYLMKATSVPGYVVVQVGDPYSDHNCWQRPEDMDTSRTFYAVSKEYPGSEVSAEIAAALAASSIVFKRYQLAYSARLLRRARMVFEFADKYRGSYNDGLGHWVCPFYCDYSGYQDELVWGAAWLFKATKNSYYRKYIDENIHNLKTFAEFGWDSKDAGINVLLSTLMINNSSNSNADKFICSVLPESPSLSVSYSPGELMFKQGGSNLQHATAFSFLFLVYADYLNKVNRHVDCGGKASAISPTRLIQFARSQVDYILGSNPLKMSYMVGYGEKYPKRIHHRASSLPSIDMQRGHIDCKGGSSYFQSQNPNPNVLLGALVGGPDINDQYADSRSDFVHSEPTTYINAPFVGALAYFKSHSSSKPN 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01318 481 FunFam Endoglucanase 10 477 - -
Arst3g01318 481 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 445 463 IPR033126 -
Arst3g01318 481 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 372 398 IPR018221 -
Arst3g01318 481 Pfam Glycosyl hydrolase family 9 14 469 IPR001701 GO:0004553|GO:0005975
Arst3g01318 481 Gene3D - 9 481 IPR012341 GO:0005975
Arst3g01318 481 PANTHER ENDO-1,4-BETA-GLUCANASE 9 475 - -
Arst3g01318 481 SUPERFAMILY Six-hairpin glycosidases 12 478 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01318 Arst-Chr3 11084823 11089001 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01318 1 477 Glycoside Hydrolase AT1G70710 57.202 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01318 K01179 - gmx:100775752 713.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g01318 3 11084823 11089001 Arst3g01318 3 11084823 11089001 ECH