Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01296 ATGAGGAGAGATCAGAGAAGTCCAAAACAGGATCCAATTTTGAGTTCTCAATATGTTGTATGCGAGGAAAGGTACAACTGCCGTTTTGAAGCACTTGATCGGACGCTCAGGAATCTTATGTCAGTTACCGATCAACATAAGACACATAAACCATTTGGTGGTAAGATTGTTGTTCTAGGAAGTGATTTCAGACAGATACTTCCGGTGATTCCGAAAGGAAGTAGACACGATATATTAGCATCCGCTATTAACTCATCCCAATTTTGGTCATTTTGTAAGATACTTGATGTTGGAAATGGAAATATTATCTCTGTTGTTGGTGATGAATCAGAAGTTAAAATTTCAGATGATCTATTGATTACAACTACTGATGATCCTCTCTCTCATTTGGTAGACTTTGCATATCCAAATTTGTTGCAAAACATGTCAGATTACAGATATTTTCAGAGTAGAGCAATTCTTGCACCCACACTTAAGAGTGTCGAGAAGGTAAACGATTTTGTCTTGACAATCTTTTCAGGGATGGAAAAGGAGTATTTGAGCTCTGACACAACATGTCAAGCTGATGAGAATGAAGATGTAAAACAAGAGTGGTTCACATCAGAGTTTCTAAATGACATCAAATGTTCGGAACTCCTCAATCACAAGTTGACTTTGAAGCCAGGAGTCGCTGTAATGCTACTGCGAAACATAGACCAGACTTCAGGTTTATGCAACAGGACAAGATTAATAGTTAACAAACTTGGCAGCAACGTAATTGGAGCGACGGTAGTGACCAGTAGAAATATTGGAGATAAAGTGTACATTCCAAGAATGAACTTGATCCCTTCAGATTCAGGATTGCCATTTAAGTTCCAACGGAGACAATTTTCATTAACAGTATGCTTTGCAATGACCATTAACATGAGTCAGGATCAATCATTATCACATGTACGGCTTTATTTGCCAAAATCAATGTTCATCTATGGACAACTTTATGTTGCTTTGTCAAGAGTTAAGAGTCGCAGTGGCCTCAGGGTTTTAATTCTAAATGAAGATGGCAATCCAAAGTCATCAACAACAAATGTCGTTGTTAACTCCCTTCGGAGAATGAAATCTCACCATGTTGAATTGCTGATTGCAGGTTTCTCTGATGAAATGCTGGAACTGCTCCTGTTCGCGCTGCAAGATTTGAGGAACTCCTTGAAGGAACGCGGCTCCAATCTCATGATTAGATTCGGGAACGCAGAGCACGTCATACAACAGCTTGCATCTGAGGTGAATGCCAGTTGTGTATTTGCAGAACAAGAGGTGGAGTATGAATTGTACTTGCTTTTGGATGTTGTGAAGGAGTGTATGAAATCTGTCACGGTTCGAGAACGTGCTCCTAGGATTGAATTATGGAACACTCCATTTTATGATGTAAATGTTCTGCAAAATCTTCCTGCATCGTATGATGACTTTAAGAAACTTCGACTACCTGTAACTGAACCACTTCAGCTGTCAAAATTACCTGCTGCAGACATGGAACTGGACTGGGGTACTCTTCCTGTATATGATGATGTAAAGAATTTCATTACCAGCAACCAAGGGAGATTGAGAGAGAGGTGGAACTCAATCAAGTTGACATCAGCTGAAACCTTATTACGGAATAAAATAATGAAGTCTAGTGAAAGCAGTGAAGGAAGTTATGACTCTAGGCAACTGCAGTCAAAGAAATCAAATGAATCTGTTTTCCTGTCACAAAAAGGTAATGCTGTAGGAGGTGGAACAAACAATGTATTAAATGCCTTGGCTGCATATTTGAGATATTTCGAGGGAACAGCTCGTGATGACTGGCAAGAGATACATGAAAAGGTACGTGCTTCTGAAAGTCGGAATGGAGCATCATTTATTGCACTTTTTGGTCCTGCTCTATCCCTTGGCATTATATCTAGAAGAAGTGTACACTATGAAGCTATCAAATATGAGAGAGAACGAAATGCAGGATTTATATCTCCCTTTGGATATTCAGCTACCACAATTGCAGGAGCAGTTGATGCTGTGTGCTCAAAGGAGTGGTACTGGCTTATGGCTTTGAGAAATCAAACAAATAATGATGGGATACACTCAACACGGATGTGGAAATGGAATGGTTTTCTTATTCAGTATACAGTTGCTGGCAATGATGGTCCTGCTGTTGTTCTTGTGCATGGATTTGGCGCTTTCGCAGAGCATTACCGTGACAACATAAATGGTTTAGCTGGAGCTGGAAATCGTGTTTGGGCTATTACATTGTTAGGATTTGGCAATTCAGAAAAGCCAAATATTGTGTATACTGAACTCTTGTGGGCCGAACTAGTGAGAGATTTTATTGTTGATGTTGTGGGTGAACCTGTCCACCTTGTCGGGAACTCAATTGGTGGTTATTTCGTATCCATTGTTTCTTGTCTTTGGAATGTTTTGGTCAAATCTGTAGTCCTAATCAACAGTGCTGGCAATGTCGTCCCTAGTTATACATACATACCTTTACCTGAAGATAGAAAAACTTCCGGCGCCTCCTGGTTGGGCTCTCGTGTTCTTCTACTATATTTGAGGTTACGGATTCAGGAGTTAGTTAAGAAATGTTATCCAACTCGGACAGAAAGAGCAGATGATTGGCTCATAAATAAAATGCTAAGAGCATCATATGATCCTGGTTCTCCTGTGGTCGTGGAAAGCATCTTCAGTTTTAATCTTTCCATACCTCTTAATTTTCTTATTGAAGAATTCAGGGAAAAGGTTCTGATTATACAGGGGATGAAAGATCCAATTTCTGACTCCAGTTCCAGGGTGGCTACACTGAAAGAACATTGCGATGGACTTGTAATTAAAGAATTGGATGCTGGCCATTGTCCGCACGATGAGGTGCCAGAACAAGTGAATGATATCCTTTATGAGTGGATACCTAGGATTGAAAGCCAAATTTTGACAGGGTCCCCAGCTTAA 2946 0.4005 MRRDQRSPKQDPILSSQYVVCEERYNCRFEALDRTLRNLMSVTDQHKTHKPFGGKIVVLGSDFRQILPVIPKGSRHDILASAINSSQFWSFCKILDVGNGNIISVVGDESEVKISDDLLITTTDDPLSHLVDFAYPNLLQNMSDYRYFQSRAILAPTLKSVEKVNDFVLTIFSGMEKEYLSSDTTCQADENEDVKQEWFTSEFLNDIKCSELLNHKLTLKPGVAVMLLRNIDQTSGLCNRTRLIVNKLGSNVIGATVVTSRNIGDKVYIPRMNLIPSDSGLPFKFQRRQFSLTVCFAMTINMSQDQSLSHVRLYLPKSMFIYGQLYVALSRVKSRSGLRVLILNEDGNPKSSTTNVVVNSLRRMKSHHVELLIAGFSDEMLELLLFALQDLRNSLKERGSNLMIRFGNAEHVIQQLASEVNASCVFAEQEVEYELYLLLDVVKECMKSVTVRERAPRIELWNTPFYDVNVLQNLPASYDDFKKLRLPVTEPLQLSKLPAADMELDWGTLPVYDDVKNFITSNQGRLRERWNSIKLTSAETLLRNKIMKSSESSEGSYDSRQLQSKKSNESVFLSQKGNAVGGGTNNVLNALAAYLRYFEGTARDDWQEIHEKVRASESRNGASFIALFGPALSLGIISRRSVHYEAIKYERERNAGFISPFGYSATTIAGAVDAVCSKEWYWLMALRNQTNNDGIHSTRMWKWNGFLIQYTVAGNDGPAVVLVHGFGAFAEHYRDNINGLAGAGNRVWAITLLGFGNSEKPNIVYTELLWAELVRDFIVDVVGEPVHLVGNSIGGYFVSIVSCLWNVLVKSVVLINSAGNVVPSYTYIPLPEDRKTSGASWLGSRVLLLYLRLRIQELVKKCYPTRTERADDWLINKMLRASYDPGSPVVVESIFSFNLSIPLNFLIEEFREKVLIIQGMKDPISDSSSRVATLKEHCDGLVIKELDAGHCPHDEVPEQVNDILYEWIPRIESQILTGSPA 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01296 981 Pfam DNA photolyase 379 435 IPR006050 -
Arst3g01296 981 Pfam Alpha/beta hydrolase family 720 962 IPR000073 -
Arst3g01296 981 CDD SF1_C_RecD 296 340 - -
Arst3g01296 981 Gene3D HUPs 363 474 IPR014729 -
Arst3g01296 981 Gene3D alpha/beta hydrolase 690 971 IPR029058 -
Arst3g01296 981 Pfam PIF1-like helicase 94 248 IPR010285 GO:0000723|GO:0003678|GO:0006281
Arst3g01296 981 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 384 512 IPR036155 -
Arst3g01296 981 SUPERFAMILY alpha/beta-Hydrolases 698 968 IPR029058 -
Arst3g01296 981 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 50 361 IPR027417 -
Arst3g01296 981 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 322 466 IPR006050 -
Arst3g01296 981 PANTHER DNA PHOTOLYASE 372 976 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01296 Arst-Chr3 10823765 10829635 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01296 704 761 Acyl Lipid Metabolism Gene Families AT2G26740 42.373 9.70e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01296 - - adu:107495626 1931.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g01296 3 10823765 10829635 Arst3g01296 3 10823765 10829635 ECH