Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01295 ATGTCGAAGGACAAGGACTCTACCAATTTGTCACGCACCTTCAAATACCTCTTAGCTACTCAATTCTTGTCAAGAGGAATTCCATTTATATTCAATACATGGATTGTAAGGCATCTTACACAAGAGGACTATGCGCTATATGCAGTGCAGTTTCATCTGTTTATCACATGTGTTTTATTTCTTAGTCGGGAAGGCTTCCGGCGAGCATGCTTGCGCATGGAAATGCAAAGTGATGGCAATACAAAAGATGTTGTGAAGCTAATGAAAGTGGTGTGGATGAGTTTCCCGCTTGGAATATTTATTACAATAGTGGCATGCTCTTTTGTTCTATGGTTGCAAGGCCTAAGTTATTCTAGTTCACTTGGGCAAGCTGTCTTGATAAATGGTCTTGCATGCATTTTGGAGCTTTTAGCTGAGCCTTTGTATATTCTTTCACAGAACTTGGTCTTGCTTGAATTAAGATTGATGGTTGAGACAGTAGCTACTATTTCACGATGCTTGACAATGTACTTTCTACTTGTCAAGAAATCTCAAATGGAAAAACCAATCATATTTGCATTATCACAATCTGCGTATGGAGCCTGCTTATTTATTGGTTACTGGGGTTATCTCATTCTATTCAGCAAATTCAAATGTTCTTACCTTTTCCCATTCAGAGAAGGAAAACTGATTGACTTTGATAAGCAGCTGTCCAAGATGTGCATGTTGTTTACCTTTCAATCTTATCAAAAGTTGATTCTTCAGGAAGGAGAAAAAATGGTGCTTGTGTGGTTGGATACACCATATAATCAAGCAGTGTATGGTCTTGTGGACAAATTAGGTAGCTTAGTGGTGAGACTAGTCTTTTTACCTTTTGAAGAAAGTTCATATGTAACCTTTGCAAGGTCTGCTTCAGGACAATATCCAGGGAAGAGCAAGAAATTAGGAAACTGCTTGATGGAGTCCCTCAAGTTAGTTTTGTTGATTGGCCTTGTCTTTATGGCATTTGGTCCAAGTTATTCTTATTCGCTCATTAGATTGCTGTATGGTGAAAAATGGAGTGATGGGGAAGCGTCAACTGCTCTCCGCTACTACTGCCTTTATGTCATTGTCTTGGCTATCAATGGAACATCTGAAGCCTTCTTGCATTCAGTTGCAACAGAGAGCCAACTAAAGCGTTCAAATCATTCATTAGTTGTATTCTCGGTGATCTATGTAGTTTTGAATGTCCTGCTAATAAGAATAGCTGGGGCAGTTGGCTTAATTATGGCAAATTCTCTCAATATGACCTTGAGGATTTCATACTCTGCTGTATTCATTAAAAATTATTTCAAGGAATCTTCCTCATTTTCATTCTCGAGCTGCTTGCCTTCAGGATGGACTTTTCTGTTAATTTCAGGTGTAATCACTCTCATTTCTGAGAATATATTTCTGGACCAAGAAAACTTCTGGCCAACATTCATGATCCATTTGTCTGTTGGGCTGGCTTGCTTCTGCATTTCATCTTATGTGATCTACCAACGGGAAAAACCGTTCATCAAAAGGATTATTCGTTTTCGTGATCACTCAGACTGA 1554 0.388 MSKDKDSTNLSRTFKYLLATQFLSRGIPFIFNTWIVRHLTQEDYALYAVQFHLFITCVLFLSREGFRRACLRMEMQSDGNTKDVVKLMKVVWMSFPLGIFITIVACSFVLWLQGLSYSSSLGQAVLINGLACILELLAEPLYILSQNLVLLELRLMVETVATISRCLTMYFLLVKKSQMEKPIIFALSQSAYGACLFIGYWGYLILFSKFKCSYLFPFREGKLIDFDKQLSKMCMLFTFQSYQKLILQEGEKMVLVWLDTPYNQAVYGLVDKLGSLVVRLVFLPFEESSYVTFARSASGQYPGKSKKLGNCLMESLKLVLLIGLVFMAFGPSYSYSLIRLLYGEKWSDGEASTALRYYCLYVIVLAINGTSEAFLHSVATESQLKRSNHSLVVFSVIYVVLNVLLIRIAGAVGLIMANSLNMTLRISYSAVFIKNYFKESSSFSFSSCLPSGWTFLLISGVITLISENIFLDQENFWPTFMIHLSVGLACFCISSYVIYQREKPFIKRIIRFRDHSD 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01295 517 CDD MATE_rft1 9 439 - -
Arst3g01295 517 PANTHER ENDOPLASMIC RETICULUM MULTISPAN TRANSMEMBRANE PROTEIN-RELATED 1 514 IPR007594 GO:0006488|GO:0016020
Arst3g01295 517 Pfam Rft protein 13 510 IPR007594 GO:0006488|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01295 Arst-Chr3 10812828 10820877 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01295 K06316 - gmx:100817452 872.078
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g01295 3 10812828 10820877 Arst3g01295 3 10812828 10820877 ECH