Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01289 ATGTCGTTTCCACCTTCCAACAACAATACCCAGAACCAGAATCAGCATAATGCGATTATAAAGAACCCTAACCCTAACAATTTCCCAATTTCTTCTCCCACAAAGAAGAGAGCTTCAAGGTGGTCCGATATCTGGCTCAAGACCAACACCAACGCCAAGAATAATAATCCCCTCAACTCCATGGTCGTTGCTATGCAGCTTCACTCTCTATCTTCTTCCCCCAAACACCCGAAATCGATTCCCAATTTCTCAATCATGGACCGAACCCTACTCTTATCCGACGAGCTTCTTTTGAAGATCCTCGCCAAGCTTCCAGATTCTCAGAGGAACTCAAATTCCCTCGTTTGCAAGCGGTGGCTCAACCTCCAGGGTCGACTCGTTCGTTCCCTCAAGGTATTGGACTGGAACTTCCTCTTATCTGGTAGGTTGATTCACAGGTTCCCGAACCTAAATCACGTTGATTTGGTCTCTGGGTCTTTGATTTCTCCGAGAAATTCCGGAATTTGTTTGAGCCATCGTTATCTTTCCATGCATGTTGATTCTGCGTCTTCGCCAAGTTGGTGTTTTGGTGAGGAGAATTTGCTCCCTGTTGAGGTCATTGACAATGGCCTAATTGCTCTTGCCGGTGGCTGCCCCAATTTGCGCCGGCTTTCGGTGATCGGAGCCAGCGAGATGGGCCTGCTGAGTGTGGCTGAGGAGTGTTCCACATTGCAGGAGCTTGAGCTGCAGAGGTGCAGTGACAATGTACTTCGAGGGATCGCGGCTTGCGCGAATTTGCAGATCTTGAAACTTGTGGGGAATGTTGATGGTTTGTACACTTCAGTTGTGTCTGATATTGGGTTAACCATTTTGGCTCAGGGGTGTAAGAGGCTGGTGAAGCTTGAGCTTAGTGGGTGTGAAGGTAGCTTTGATGGGATCAAAGCCATTGGCAAGTGTTGCCAAATGTTGGAGGAGTTGACTTTTTGTGATCACAGGATGGATGATGGGTGGTTGGCAGCACTCTCATTTTGTGAGAATTTGAAGACATTGAGGTTCCAGTCTTGCAAACGGATCGATCATAATCCTGGTCTAGAGGAGTACTTGGGTTCTTGCGAGGCACTCGAACGGCTTCATTTGCACAAATGCCAGCTGCGCGACAAGAAGAGTGTTGCGGCCATGTTTTCCGTGTGCAGGGCTGCAAAGGAGATCATTATCCAGGATTGTTGGGGATTGGACAATACCATGTTTAGCTTCGCAAATGTTTGCAGGCGGGTAAAATTGTTGTACTTAGAAGGATGCTCAATGCTAACAAATGAAGGTTTGGAATCTGTAATCCATTCTTGGAAGGAGCTTCAGAGCCTTAAAGTAGTGTCATGTAAGAACATAAAGGACAGTGAAATCTCTCCTGAACTAGCAACCTTATTCACCACTCTCATAGATTTGAAATGGAGACCAGACACCAAATCACTTCTTCCATCAAGTCTTGCCGGAATAGGCATGGGTAAGAAAGGTGGTAAATTTTTCAGGAGGGTGTGA 1515 0.466 MSFPPSNNNTQNQNQHNAIIKNPNPNNFPISSPTKKRASRWSDIWLKTNTNAKNNNPLNSMVVAMQLHSLSSSPKHPKSIPNFSIMDRTLLLSDELLLKILAKLPDSQRNSNSLVCKRWLNLQGRLVRSLKVLDWNFLLSGRLIHRFPNLNHVDLVSGSLISPRNSGICLSHRYLSMHVDSASSPSWCFGEENLLPVEVIDNGLIALAGGCPNLRRLSVIGASEMGLLSVAEECSTLQELELQRCSDNVLRGIAACANLQILKLVGNVDGLYTSVVSDIGLTILAQGCKRLVKLELSGCEGSFDGIKAIGKCCQMLEELTFCDHRMDDGWLAALSFCENLKTLRFQSCKRIDHNPGLEEYLGSCEALERLHLHKCQLRDKKSVAAMFSVCRAAKEIIIQDCWGLDNTMFSFANVCRRVKLLYLEGCSMLTNEGLESVIHSWKELQSLKVVSCKNIKDSEISPELATLFTTLIDLKWRPDTKSLLPSSLAGIGMGKKGGKFFRRV 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01289 504 Gene3D Ribonuclease Inhibitor 270 355 IPR032675 -
Arst3g01289 504 Gene3D Ribonuclease Inhibitor 356 469 IPR032675 -
Arst3g01289 504 PANTHER UNCHARACTERIZED 91 465 - -
Arst3g01289 504 SMART LRR_CC_2 211 236 IPR006553 -
Arst3g01289 504 SMART LRR_CC_2 288 312 IPR006553 -
Arst3g01289 504 SMART LRR_CC_2 256 287 IPR006553 -
Arst3g01289 504 SMART LRR_CC_2 364 389 IPR006553 -
Arst3g01289 504 SMART LRR_CC_2 415 440 IPR006553 -
Arst3g01289 504 Gene3D Ribonuclease Inhibitor 188 269 IPR032675 -
Arst3g01289 504 SUPERFAMILY RNI-like 276 459 - -
Arst3g01289 504 SUPERFAMILY F-box domain 84 139 IPR036047 GO:0005515
Arst3g01289 504 FunFam F-box protein At5g51380 85 352 - -
Arst3g01289 504 Gene3D - 88 125 - -
Arst3g01289 504 FunFam F-box protein 353 487 - -
Arst3g01289 504 SUPERFAMILY RNI-like 133 268 - -
Arst3g01289 504 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01289 Arst-Chr3 10704062 10706693 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01289 K10268 - qsa:O6P43_029877 731.48