Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01259 ATGGCATTTCACGTAGCTTGCCCAATTACATGTCGTAGAATTTGCTTCTGCGCCTTAGGGTTTCCGCGAGCTCTTCATGGAACTGAAGCTTCCAATGGCTTCCTCAACGACGTTGCCGCGCTCGGCGAATTCCTCTCCGACAATCGAAAGGACACGGCCACCGTCAAGGTTGCAGTTCCCAAGGTCGTACCACCTCCTCCGCCGCCGAATCCTACGCCGGATGGAGGAGTACCTGCCGCGGAAGAGGAGTCCGCATCGATGAAGGCAAAGCGCGTGGCACTGCAGCGGAAGGGAGCCGCCGCCATGATCGCCGCCGAGGAGTACGCTCGCCGGTTGGAGTCCGGTGATGTTGCGGATGCACCTGGAAATCCTGTTGGAGAAGAACCGTGCCAAGCTAATGCCAAAGTCTTTTGTCGAATGTGTAATCGTGTTGAAAACGAAGGAAGTGAGAGAGCAAAGAAGATGCTATCGTGTAAGAGTTGTAACAAGAAGTATCATAGGAACTGCTTGAGAAGTTGGGCACAAAATAGAGATTTATTTCATTGGAGCTCATGGACCTGCAGGGCTTGCCGAATTTGTGAGGCTTGCAGAAGGACAGGTGATCCAAGTAAGTTCATGTTTTGCAAAAGGTGTGATGGTGCTTACCATTGTTATTGTCTGCAACCTCCTCATAAGAATGTTAGTACTGGGCCATATTTGTGCCCAAAACACACAAGGTGTCACAGTTGTGGATCCAATGTTCCCGGAAATGGACTGAGTGTGAGGTGGTTTCTAGGGTACACCTGCTGTGATGCATGCGGAAGATTGTTTGTGAAAGGCAACTACTGTCCAGTCTGTTTGAAGGTTTACAGAGATTCAGAATCAACACCAATGGTTTGCTGTGATATTTGCCAGCGCTGGGTGCATTGTCACTGTGATAATATTAGTGATGAGAAATATCACCAATTTCAAGTGGATCGGAATTTGCAGTATAAATGTCCTACTTGTCGTGGGGAATGTTATCAGATCAAGGGACTTGAGGATGCAGTTCAAGAGCTTTGGAAGAGAAGAAATATTGTTGATAGAGATTTAATTGCCAGCTTGCGGGCTGCAGCTGGTTTGCCAACTCAGGAAGAAATATTTTCTATTTCACCATTTTCAGATGATGAGGATAGCGAGCCTTTGAAATTAAAGAGTGAATCTGGGCGTTCCTTTAAATTCTCTTTAAAGAATTTGTCGAATAACTCACCCAAGAAGTTTAAGGATTATATAAAGAAATCTTCAAACAAAAATTCTAAGAAAAGGGACTCTCAGTCGGTTATGATTAATAAACCAGACATGCACTATAGTTTTGAAGGACAAAGCGATGTAAAATCTTTACATAGCTTGGATGATGATAAGAATGATGATATACAATCCCAAAGAAATGAAGGTCCTGATGTTTATTCATCGCCTGCTGCTGGAAGCCTGAGCCAAACTGAAGTATCTTGTCCTATCAACAAGACAGGGATTTTGAAACATAAGTTTGTTGATGAGGTGATGGTTAGTGATGAAGAGAGGAAGCCCAGAGTTTTCCGAATAAAAAATAATAAGGCACATATACTGAATAGTGAAGATGAGAGTGGAAAAGATGGTGATAAGGCTGAGAGTGTCAAAGGTAAGAAGTTGGTGATTAATTTGGGTGCACGGAAAATTAATGTGGCTAATTCTCCCCGCTCTGATACTTCAAGCTGCCAAAGGGATCAAGATCTGGTTACTGTTAATGGAAGTGAAGATATAAGCCAAGTAAGGAAAGGATTTGCATCAGATAGACATGATGGAGCCGCTAGACGTGTTGATGGAAGCAATGTTGACTCTGGCCAATCAAAACATTTAAAGGTTTCAGGTAGAGAAGAAAATTTCATTAAACTGGGGAAATTGAAGCCAGAAGTTCAGAAATTCACTCTACCATCTGGTAGAGGTGAGGTTCCTTTAGATCAAACTTGCATCTTGCAGGGAAAACGTGGTACTGATGCAAACGTGGAAGCAACACCAAGAGGTGAAAGAACATATCATCGGAGGCCGAAAGAAGGCATTTCTGATGCATATGATGGGACAGATAACAATCATAATCAAACACCTTCACATTCTTTGCCAAAAGATTCTAAACCACTACTCAGATTTAAATTCAAGAAACCTAGTGTAGAAAGTAAAAATTCTATTATTCAAGAGGAAGAAAAGACTACAATCAAGGGCCAGAGGTCAAAAAGGAAGAGACCTTCACCTTTCAAGGAGAAAGCATCTTTTAATGAGGCTGGAGATGTAAATCAATCACAGACGGGAAATCTAATGGATGAAATCATGGATGCTAACTGGATATTGATGAAGTTGGGCAATGATGCAATTGGTAAAAGAGTTGAAGTTCATCACACATCGGACAATTCTTGGCATAAGGGAGAGGTTACTGATATAGTTGAAGGCTCATCGAAATTGTATGTTACCTTAGATGATGGGAAGATCAAGACCGTGGAACTCAGGAAGCAGGGAGTTCGCTTTGTTTCTCAAAAGCAGAAAAGGTCAAAGACATGA 2547 0.4268 MAFHVACPITCRRICFCALGFPRALHGTEASNGFLNDVAALGEFLSDNRKDTATVKVAVPKVVPPPPPPNPTPDGGVPAAEEESASMKAKRVALQRKGAAAMIAAEEYARRLESGDVADAPGNPVGEEPCQANAKVFCRMCNRVENEGSERAKKMLSCKSCNKKYHRNCLRSWAQNRDLFHWSSWTCRACRICEACRRTGDPSKFMFCKRCDGAYHCYCLQPPHKNVSTGPYLCPKHTRCHSCGSNVPGNGLSVRWFLGYTCCDACGRLFVKGNYCPVCLKVYRDSESTPMVCCDICQRWVHCHCDNISDEKYHQFQVDRNLQYKCPTCRGECYQIKGLEDAVQELWKRRNIVDRDLIASLRAAAGLPTQEEIFSISPFSDDEDSEPLKLKSESGRSFKFSLKNLSNNSPKKFKDYIKKSSNKNSKKRDSQSVMINKPDMHYSFEGQSDVKSLHSLDDDKNDDIQSQRNEGPDVYSSPAAGSLSQTEVSCPINKTGILKHKFVDEVMVSDEERKPRVFRIKNNKAHILNSEDESGKDGDKAESVKGKKLVINLGARKINVANSPRSDTSSCQRDQDLVTVNGSEDISQVRKGFASDRHDGAARRVDGSNVDSGQSKHLKVSGREENFIKLGKLKPEVQKFTLPSGRGEVPLDQTCILQGKRGTDANVEATPRGERTYHRRPKEGISDAYDGTDNNHNQTPSHSLPKDSKPLLRFKFKKPSVESKNSIIQEEEKTTIKGQRSKRKRPSPFKEKASFNEAGDVNQSQTGNLMDEIMDANWILMKLGNDAIGKRVEVHHTSDNSWHKGEVTDIVEGSSKLYVTLDDGKIKTVELRKQGVRFVSQKQKRSKT 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01259 848 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 270 332 IPR013083 -
Arst3g01259 848 MobiDBLite consensus disorder prediction 451 467 - -
Arst3g01259 848 ProSitePatterns Zinc finger PHD-type signature. 138 190 IPR019786 -
Arst3g01259 848 MobiDBLite consensus disorder prediction 412 434 - -
Arst3g01259 848 MobiDBLite consensus disorder prediction 61 75 - -
Arst3g01259 848 SUPERFAMILY FYVE/PHD zinc finger 131 193 IPR011011 -
Arst3g01259 848 SUPERFAMILY FYVE/PHD zinc finger 274 330 IPR011011 -
Arst3g01259 848 MobiDBLite consensus disorder prediction 708 738 - -
Arst3g01259 848 MobiDBLite consensus disorder prediction 61 84 - -
Arst3g01259 848 MobiDBLite consensus disorder prediction 667 689 - -
Arst3g01259 848 CDD PHD_SF 137 190 - -
Arst3g01259 848 MobiDBLite consensus disorder prediction 660 763 - -
Arst3g01259 848 ProSiteProfiles Zinc finger PHD-type profile. 135 193 IPR019787 -
Arst3g01259 848 MobiDBLite consensus disorder prediction 468 487 - -
Arst3g01259 848 SUPERFAMILY FYVE/PHD zinc finger 182 243 IPR011011 -
Arst3g01259 848 MobiDBLite consensus disorder prediction 594 615 - -
Arst3g01259 848 FunFam PHD finger family protein 270 332 - -
Arst3g01259 848 SMART PHD_3 192 238 IPR001965 -
Arst3g01259 848 SMART PHD_3 137 191 IPR001965 -
Arst3g01259 848 SMART PHD_3 275 330 IPR001965 -
Arst3g01259 848 FunFam PHD finger family protein 132 247 - -
Arst3g01259 848 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 129 247 IPR013083 -
Arst3g01259 848 ProSiteProfiles Zinc finger PHD-type profile. 273 332 IPR019787 -
Arst3g01259 848 PANTHER HL01030P-RELATED 89 490 - -
Arst3g01259 848 MobiDBLite consensus disorder prediction 690 705 - -
Arst3g01259 848 MobiDBLite consensus disorder prediction 411 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01259 Arst-Chr3 10076309 10082977 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01259 - - gmx:100815407 1263.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g01259 3 10076309 10082977 Arst3g01259 3 10076309 10082977 ECH