Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01108 ATGGCGACAAGAACGGTTAAAGTGAGCAACATCTCTTCAGGCGCAACAGAGCAAGATTTGAAGGAATTTCTGACATATCCTGGAAAAATAGAACATATAGAAATGAAGAGTGAGAATAATTCCAAAGTTGCATATGTTACCTTCAATAGTTCAGATGGAGCAGAAACTGCAGTTCTTCTATCGGGAGCTGTGTTGGTTGGACAAGCTATAACCATAGTTTTGGCTACAGATTATGTTGCACCTGCCTCGGCTGCATCTACAATCCCAACCGCAACAGGAGCCACAAATGCAGATGCTGTGACTTCTGAGTCTGGTTTGTTAACAGCGGAGGATGTCGTGAGTAGCATGCTGGCCAAGGGCTACATTTTGGGCCAAGACATATTAAACCGCGCAAAGTCATTTGATGAGAGGCACCAGCTTACTTCTACTGCCTCGTCGAAAGTTGCTACATTGGACCAGAAGGTTGGTATCAGTGAAAAAATCACTGCTGGTTCGATGCTGGTGAATGATAAGGTCAAGGAAATGGATGAGAGGTATCAAGTATCCGAGAAGGCTAAGTCTGCCATGTCAGCGGCAGAGCAGTCGCTGAGCACTGCCGGATCAACTCTCATGAAGAACCGTTATGTGTTAACCGGGGCAACATGGGTGACTGGTGCATATAGCAAGGTTGCTAAGGCTGCTGAGGAAGTGGGACAGAAAACTATGGAGAAGGTTTTAGCACAAGAAAATCAAGAAAACAGTACAGAAGTCAATAAAGATGTTCACAACAGCACAACCACCACCACCACCACCACCACCACCATGCCTGAACCTCAACATGTTGCCAACACAGCTGTTCAACCTCCTAGAAATGAACCACCACAACAGGCTTCAACAACCAATCACCCTTCTAACCCTTCCACAACTCAAGGCTTGAACCCCTAA 924 0.4589 MATRTVKVSNISSGATEQDLKEFLTYPGKIEHIEMKSENNSKVAYVTFNSSDGAETAVLLSGAVLVGQAITIVLATDYVAPASAASTIPTATGATNADAVTSESGLLTAEDVVSSMLAKGYILGQDILNRAKSFDERHQLTSTASSKVATLDQKVGISEKITAGSMLVNDKVKEMDERYQVSEKAKSAMSAAEQSLSTAGSTLMKNRYVLTGATWVTGAYSKVAKAAEEVGQKTMEKVLAQENQENSTEVNKDVHNSTTTTTTTTTTMPEPQHVANTAVQPPRNEPPQQASTTNHPSNPSTTQGLNP 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01108 307 SMART rrm1_1 5 73 IPR000504 GO:0003723
Arst3g01108 307 Gene3D - 1 73 IPR012677 -
Arst3g01108 307 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 7 70 IPR000504 GO:0003723
Arst3g01108 307 SUPERFAMILY RNA-binding domain, RBD 3 78 IPR035979 GO:0003676
Arst3g01108 307 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 4 77 IPR000504 GO:0003723
Arst3g01108 307 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 3 243 - -
Arst3g01108 307 MobiDBLite consensus disorder prediction 242 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01108 Arst-Chr3 8520992 8523363 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01108 - - adu:107477362 555.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g01108 3 8520992 8523363 Arst3g01108 3 8520992 8523363 ECH