Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01079 ATGGCCGCCGAGAAGCTCAGAGATTTGAGCCAGCCGATTGATGTGCCCTTGCTTGACGCCACCGTCGCCGCCTTCTATGGCACCGGATCTAAAGAAGAGAGAAGTGCTGCTGATCAGATTTTGCGCGACTTGCAAAACAATCCCGATATGTGGCTTCAAGTAATGCATATTTTGCAGAACACTCAAAATCTCAACACAAAGTTCTTCGCCTTGCAGGTTCTAGAAGGTGTAATTAAGTATAGATGGAATGCACTACCTGTCGAGCAGCGAGACGGAATGAAAAATTTCATCTCTGATGTTATTGTACAGCTTTCTAGCAATGATGCATCATTTCGGACTGAAAGGTTGTATGTCAACAAACTCAATATCATATTAGTCCAGATTTTGAAGCACGATTGGCCAACAAGATGGGAGAAGTTTATTCCTGACCTTGTCGCAGCGGCAAAAACTAGTGAAACAATTTGTGAGAATTGTATGGCTATATTGAAACTTTTGAGTGAAGAGGTTTTTGATTTTTCAAGAGGAGAGATGACTCAGCAGAAGATTAAGGAGCTTAAGCAATCATTGAACAGTGAATTTCAACTCATACATGAGTTATGCTTATATGTGTTATCAGCATCGCAGAGGACTGAGCTCATACGTGCCACTCTCTCTACTTTGCATGCCTTCTTATCCTGGATTCCCCTGGGTTATATATTTGAATCAACATTGCTTGAGACACTCCTTAAGTTTTTCCCAATTACAGCATATAGGAATTTGACATTGCAATGTTTGACAGAGGTAGCATCCCTTCAATTTGGAAATTACTATGATGTGCAGTATGTGAAGATGTATAGTATATTTGTGGTCCAATTGCAGGGCATACTTCCACTTACTACAAATATACCTGAGGCATATGCACATGGCTCAAGTGAGGAACAAGCATTTATTCAAAATTTGGCACTGTTCTTCACATCATTCTTCAAGGTTCACATTCGCATCCTTGAAACCACCCAAGAGAACATATCTGCTTTACTGCTGGGCCTAGAGTATCTTATCAACATTTCATATGTGGACGATACCGAGGTCTTTAAGGTCTGTCTGGACTACTGGAATTGCTTGGTATCGGAGCTGTTTGAGCCTCACCGTAGTTTGGATAATCCTGCTGCTTCTGCAAATCTGATGGGACTTCAGGTTCCATCAATGCACCCTGGTATGGTTGATGGGCATGGTTCGCAGCTTCTTCAGCGGCGTCAGCTTTATGCTGGCCCCATGTCAAAGTTGAGATTGCTTATGATATGCCGTATGGCAAAGCCTGAAGAAGTTCTCATAGTTGAAGATGAAAATGGGAATATAGTTCGAGAAACCTTGAAGGACAATGATGTTCTTGTTCAATATAAGATTATGAGGGAGACTCTTATTTACTTATCACATCTTGACCATGACGATACTGAAAAACAGATGCTGAGGAAATTAAGTAAACAATTGAGTGGTGAGGATTGGTCGTGGAACAATTTGAACACATTGTGTTGGGCAATAGGATCTATATCTGGTTCCATGATGGAGGAACAGGAAAACAGATTTTTGGTTATGGTCATTCGTGATTTATTGAATCTATGTGAAATCACAAAGGGAAAAGATAACAAAGCTGTTATTGCAAGTAATATCATGTATGTTGTCGGGCAATATCCACGATTTCTAAGAGCTCATTGGAAGTTCCTTAAAACTGTTGTTAATAAATTGTTTGAGTTTATGCATGAGACTCACCCTGGAGTTCAGGATATGGCCTGTGATACATTCCTGAAAATTGTCCAGAAGTGCAAGCGTAAATTTGTGATCACCCAGGTTGGGGAAAATGAGCCATTTGTATCCGAACTGTTATCAGGCCTTGCAACCACAATTGCAGATCTAGAGAATCTGTATGTCTTCGATCTTAAGTTCATTTTTATTTAGTTAGTCGGTCACATGATTCAAGCAGAGTCTGATACACATAAGAGAGATGAATATCTTCAACGATTGATGGAACTCCCAAATCATAAATGGATGGAAATTATAGGGCAGGCACATCAAAATGTGGACTTCTTGAAGGATCAAGATGTAATCCGTACCGTGCTTAATATATTGCAGACGAATACAAGTGTTGCATCTTCTTTAGGGACATATTTTCTCCCCCAAATTACATTGATATTTTTGGACATGCTGAATGTATACAGGATGTACAGTGAGCTTATTTCTAAAAGTATTTCAGAAGGAGGTCCATTTGCATCAAGAACATCTTATGTGAAACTATTACGTTCGGTTAAGAGGGAGACACTTAAGCTTATTGAGACATTCTTGGATAAGGCTGAAGATCAACCACAAATCGGGAAACAATTTGTGCCACCAATGATGGATCCTGTTCTTGGAGATTATGCTAGGAATGTTCCTGATGCAAGAGAATCGGAGGTTTTGTCCCTTTTTGCCACAATTGTAAACAAGTATAAAGCTGCAATGATTGATGATGTACCTCGCATATTTGAAGCTGTTTTCCAGTGCACACTTGAGATGATTACTAAAAACTTTGAAGATTACCCAGAGCATCGGCTCAAGTTCTTCTCATTGCTTCGTGCCATAGCTACTCATTGTTTTCCTGCATTAATCCACCTATCAAGTCAGCAACTGAAGCTTGTCATGGATTCGATTATATGGGCTTTCCGGCATACTGAAAGGAATATTGCTGAAACTGGGTTGAACTTGTTATTGGAGATGCTGAAGAAGTTTCAGGGCTCAGAGTTCTGTAATCAGTTTTATCGGACCTACTTTTTGACAATTGAGCAAGAGATATTTGCCGTCTTGACAGACACCTTCCATAAGCCAGGGTTCAAATTACATGTGTTGGTGCTTCAGCATTTGTTCTGTCTGCTGGAAACGGGGGTTATTACCGAGCCTCTTTGGGATGCTGCAACAAATCCCTTGCCATACTCGAGTAATGCAGTATTTGTACGTGAGTTTACTATAAAACTTCTAAGCACTTCATTTCCCAACATGACATCAGCAGAGGTTACGCAATTTGTAACTGGACTCTTTGAGTCTACAAAGGATCTTTCAACATTTAAGACTCACATACGAGACTTTCTTGTACAGTCAAAGGAATTTTCAGCTCAGGATAACAAGGATCTGTATGCTGAAGAGGCTGCAGCTCAGAGAGAGAGAGAGCGACAAAGAATGCTTTCTATTCCGGGGCTTATTGCCCCGAGCGAATTGCAAGATGAAATGGTGGATTCATAG 3246 0.4042 MAAEKLRDLSQPIDVPLLDATVAAFYGTGSKEERSAADQILRDLQNNPDMWLQVMHILQNTQNLNTKFFALQVLEGVIKYRWNALPVEQRDGMKNFISDVIVQLSSNDASFRTERLYVNKLNIILVQILKHDWPTRWEKFIPDLVAAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQKIKELKQSLNSEFQLIHELCLYVLSASQRTELIRATLSTLHAFLSWIPLGYIFESTLLETLLKFFPITAYRNLTLQCLTEVASLQFGNYYDVQYVKMYSIFVVQLQGILPLTTNIPEAYAHGSSEEQAFIQNLALFFTSFFKVHIRILETTQENISALLLGLEYLINISYVDDTEVFKVCLDYWNCLVSELFEPHRSLDNPAASANLMGLQVPSMHPGMVDGHGSQLLQRRQLYAGPMSKLRLLMICRMAKPEEVLIVEDENGNIVRETLKDNDVLVQYKIMRETLIYLSHLDHDDTEKQMLRKLSKQLSGEDWSWNNLNTLCWAIGSISGSMMEEQENRFLVMVIRDLLNLCEITKGKDNKAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCKRKFVITQVGENEPFVSELLSGLATTIADLENLYVFDLKFIFIXLVGHMIQAESDTHKRDEYLQRLMELPNHKWMEIIGQAHQNVDFLKDQDVIRTVLNILQTNTSVASSLGTYFLPQITLIFLDMLNVYRMYSELISKSISEGGPFASRTSYVKLLRSVKRETLKLIETFLDKAEDQPQIGKQFVPPMMDPVLGDYARNVPDARESEVLSLFATIVNKYKAAMIDDVPRIFEAVFQCTLEMITKNFEDYPEHRLKFFSLLRAIATHCFPALIHLSSQQLKLVMDSIIWAFRHTERNIAETGLNLLLEMLKKFQGSEFCNQFYRTYFLTIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCLLETGVITEPLWDAATNPLPYSSNAVFVREFTIKLLSTSFPNMTSAEVTQFVTGLFESTKDLSTFKTHIRDFLVQSKEFSAQDNKDLYAEEAAAQRERERQRMLSIPGLIAPSELQDEMVDS 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01079 1081 Pfam CRM1 / Exportin repeat 3 491 540 IPR040485 -
Arst3g01079 1081 Pfam CRM1 C terminal 718 1039 IPR014877 GO:0005049
Arst3g01079 1081 SUPERFAMILY ARM repeat 22 1037 IPR016024 -
Arst3g01079 1081 Pfam CRM1 / Exportin repeat 2 410 477 IPR041235 -
Arst3g01079 1081 ProSiteProfiles Importin-beta N-terminal domain profile. 37 103 IPR001494 GO:0006886|GO:0031267
Arst3g01079 1081 Pfam Chromosome region maintenance or exportin repeat 337 372 IPR041123 -
Arst3g01079 1081 SMART IBN_N_2 37 103 IPR001494 GO:0006886|GO:0031267
Arst3g01079 1081 Pfam Exportin 1-like protein 115 258 IPR013598 -
Arst3g01079 1081 SMART CRM1_C_2 718 1040 IPR014877 GO:0005049
Arst3g01079 1081 FunFam protein EXPORTIN 1A 1 1065 - -
Arst3g01079 1081 FunFam protein EXPORTIN 1A 1 1065 - -
Arst3g01079 1081 Gene3D - 1 1064 IPR011989 -
Arst3g01079 1081 Gene3D - 1 1064 IPR011989 -
Arst3g01079 1081 PANTHER EXPORTIN 1/5 4 1079 IPR045065 GO:0005049|GO:0006611
Arst3g01079 1081 Pfam Importin-beta N-terminal domain 37 103 IPR001494 GO:0006886|GO:0031267
Arst3g01079 1081 PANTHER EXPORTIN 1/5 4 1079 IPR045065 GO:0005049|GO:0006611
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01079 K14290 - gmx:100802384 2001.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g01079 3 8185611 8197329 Arst3g01079 3 8185611 8197329 ECH