Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01078 ATGCTTGGTCTTGATGCTGCTGGAAAAACAACTATACTCTACAAGCTGCACATTGGAGAAGTTCTATCAACTGTTCCTACAATTGGTTTCAATGTGGAGAAGGTTCAGTATAAAAATGTTGTATTCACAGTTTGGGATGTCGGAGGTCAAGAGAAATTAAGGGCACTTTGGAGGCACTATTTTAACAACACAGATGGTCTGATATATGTTGTTGACAGTCTTGACCGAGAGAGACTTGGGAAAGCAAAGCAGGAATTTCAGACAATCATAAATGACCCATTTATGCTCAACAGTGTCATCTTGGTGTTTGCCAACAAACAGGATCTGAGAGGAGCAATGACACCAAGGGAGGTATGTGAAGGATTAGGTCTCTTTGACCTCAGGAATAGAAAATGGCACATACAAGGCACTTGCGCGCTTAGGGGAGATGGCCTTTATGAGGGCTTGGACTGGTTGTCCTCAACTTTGAAAGAGAGACAGGCTGCTGGATACTCTTCAATAGCACTAGGAACCTCATCCTTCTAA 525 0.4286 MLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKNVVFTVWDVGGQEKLRALWRHYFNNTDGLIYVVDSLDRERLGKAKQEFQTIINDPFMLNSVILVFANKQDLRGAMTPREVCEGLGLFDLRNRKWHIQGTCALRGDGLYEGLDWLSSTLKERQAAGYSSIALGTSSF 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01078 174 SMART arf_sub_2 1 160 - -
Arst3g01078 174 ProSiteProfiles small GTPase Arf family profile. 1 156 - -
Arst3g01078 174 CDD Arf1_5_like 1 155 IPR045872 GO:0003924
Arst3g01078 174 PRINTS GTP-binding SAR1 protein signature 53 78 IPR006689 GO:0003924|GO:0005525
Arst3g01078 174 PRINTS GTP-binding SAR1 protein signature 26 50 IPR006689 GO:0003924|GO:0005525
Arst3g01078 174 PRINTS GTP-binding SAR1 protein signature 98 119 IPR006689 GO:0003924|GO:0005525
Arst3g01078 174 FunFam ADP-ribosylation factor 2 1 165 - -
Arst3g01078 174 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 159 IPR027417 -
Arst3g01078 174 Gene3D - 1 166 IPR027417 -
Arst3g01078 174 PANTHER ADP RIBOSYLATION FACTOR-RELATED 1 154 IPR024156 GO:0005525
Arst3g01078 174 Pfam ADP-ribosylation factor family 1 155 IPR006689 GO:0003924|GO:0005525
Arst3g01078 174 NCBIfam small GTP-binding protein domain 1 116 IPR005225 GO:0005525
Arst3g01078 174 SMART sar_sub_1 1 156 IPR006689 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01078 Arst-Chr3 8182091 8184967 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01078 K07937 - gmx:100499903 343.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g01078 3 8182091 8184967 Arst3g01078 3 8182091 8184967 ECH