Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00948 ATGGCGGAAACCTGCTCCGTCGACGCTTCCCTCTGGTGGGACTCATTCACTCTCTTCTTCACTCAGCTCGAAAACTTATCCCCCTCCTCAGATCTTCCACCAAATTTGGCGAAGAAGTTGAAGGAAAACCATTCGTGGTTCGCTGACTTGCTCTTGCGCTTCAAGCCACCGAGTCAGAAGTCAAAGGAAGCTTTGAACTCGAAGAAGCTGAAAATTGGATCTCATGAGCTCACAGTTCAACCTGAGCTCAAAGATAAAGCTCTTCAGATTAGCTCCTACTTGCTACTAGATGAGGTTCAATCATACATACTTGTGGAAAGGTCCATTAAAAATAACAGTGTGGCTCCTAGTTTGATGTTTCCAGAGTTTCTTCACATGATGTTGATTCAATATTACATGGAGCGACAATGCTTGCTGAAGTGCATAAGGTGGATTCTCATGCATGCTATTTATATTGGTTCTATATCTGAAGACAATATTGTTAGGGAGGAGGCAAAAAAGCTGTTTGATAATCAGCTAGAAAGTAAGTTAGTATCATTCTTCGAGGACCATTTGTCTTGCAGCTTCCCCGAACAAATGGATGTTGATCTTTTTACTCTGTGGTCTGAGGAGACTCTAATTGAAGACAACTTGATTTTAGATATCCTTTTTCTTGGATACTATGACTCATTTTGTACATGTAGTGCTGAAATATGGAAGAGGTTTTGTTCTCTTTACAAGGGGATCTTACTTGGTGACTATAACTTGGGGAAGCTGGCAATAACTACAGAAGCACAACAGTTGTCTTACCATACTAAAGTTCAGCTGCTTCTTATTTTAATAGAAACACTGAACTTGGAGAATATGCTTCAAATGGTTCATGATGAAAGACCTTATAGGAAGGGTGTATGTTCTTTTTCCTTGAATAATGTCCAAGAGATCGATGCACTAGTTTCTACTTTCAGTGGTTTTGAAATGAATGAAGCTGGTCCTCTTGTTCTAGCTTGGGCAGTATTTCTTTATCTGCTCTTGACACTTCCGGGTAAAAATGGGACCAATGAGCTAATGGAGATTGATCACATTGGTTATGTTCGTCAAGCCTTTGAGGCTGGATTCTTACGTTACTGTCTTGAAATTCTTGAGTGTGACATCTTCAAGGAGTATGATGGCCCAGCGTCTGGTTATCGCAGTGTTTTGAGGACATTCATATCTGCATTTATTGCATCTTATGAGGTCAACCTTCAGCTAGAGGACGGTAACCCTGCTTTGATACTGGATATTCTTTGCAAGATCTACCATGGAGAGGAGTCACTATGTACTCAGTTTTGGGACAAGGAAAGTTTTATTGATGGTCCAGTTCGGTGTCTTCTTTACAACCTGGAGAGCGAGTTCCCTGTCAGGACTCTTGAACTTGTACGGCTCTTGTCTTCCCTTTGTGAAGGCACTTGGCCTGCAGAATGTGTGTATAACTTTCTAGATAAGTCTGTTGGTGTATCATCCTTGTTCGAGATTAGCAGTGATTCACAGGTAGATGATGCCTCTCATATGGTTGAGGCACGACAGGCAGTGCAAGTTCCTGGAGTTGAGGGTTTTTTTATTCCTCCTGGTACTCGTGGGCGTGTCTTGAAATTTGTTGGAGAGGATACTGCCCTCGTGCGATGGGAGTATGCTCCATCTGGGGTGTTTCTTTTGCTCCTACGTTTGGCCCAAGATGTGTACTTGAATAACAAGGAGGAAGTTCTTTGCACGCTTGACCTGCTCAGCAGATTGGTGTCCTTTAATACTGCTGTCTGTTTTGCTGTGTTAGACATTAGCAACTCTCTACAGTTCCATGCTATTGGCCTGATGAACGAGCAGATTGAAAAGAATGTCTGGGTGGTTGAGATCATCTGTAATCTGGTTAAAAACCTGCCTCTGAATTCCTGTAGTGCTGCACTTATGTCAATGGCCATCAAGATCTTGGTGACTATGTTGATTTGTTCTCCAGCTAATGTTACAACAGTTGCTTTAAATGCAAATCTATTTGATATCAATTTGCAGACTGCCGTGTTCAGTGTAGGCAACAATGGCTTCTCAAGTGGGTCATGGTTGCTTTCCAGCAAACTGGCAAGGATGATTTTAACTGATTGTGAGATGAACAGTAGTGACTGCCCCTTGGCAATATCAGTGCTGGACTTCACCATACAGCTTGTAGAGACAGGGGTGGAGAATGATGCTCTCCTGGCACTGATCATTTTCTCTGTACAATTTGTCCTAGTCAATCACCAGTATTGGAAATACAAGATAAAGCAAACCAGATGGAAAATAATGTTGAAGGTTCTTGAATTGATGAAAAAATGCCTGGAGTCGATGCCCTGTTATGGAAAGTTGGGAGAGATCATACACAAGGTGTTATTCTCTGATTCTTCCATCCACAACACACTCTTCCAAATTGCTTGCACTACTGCCCAAGCCTTGGAGAAACTGCATGTAAGTCGCCTCTTTGATCCAATGGAAATTGAGGGGATACAGCTTGCTATAGGATCTGTCTTGGACATTCTTGTGGTTATGCTGACTAGACTGTCAAAGGATAACTCTTCCAGCTTTCCCGTTTTTCTCCAAGCAGTGTTCTCATGCACAACCAAATCAGTTCCTCTTATCACTTCTGTTACTTCTTTGATTTCATACTTCCGGGATCCTGCCATCCAGTTGGGTGCTGTCAAGTTCATTTCAATGTTATTTGTCACGGCAGATTGTTGTCAACCATTTTCGTATGGAACCACGTTCTTTGCTCCTGATAATGAGGAGATCATGGATTTGAGGCGTTCTGCAAGCTACATACTGCAGGAGCAACTGCTATCAAATGAAGACCTTTTTGTTGCAACACTTAATTTATTCACTTCTGCAGCACGTTACCAGGCTGCTTTTGTTGTTGCTATCTTTGCTCCAGATGCCGGCAATGAAGACCAACATAATACTGGGGATCCAAAGTCGCAAAGTAGTGAAACTTCTCTGGTACCGCTAGTATCCAAAAAATCAAGTTTACTAGATGCGCTTATGCTCTACATTGAGAGGGCATGTGATTTGATCAAAAGCAAGCCTCGGATACTGCTTAGTGTACTTAACTTCATGGTTTCCCTGTGGCAAGGGTCTCCTCAATATGCAAATCTCTTAGAAATTTTGAGAAGCTATGGAAAGTTTTGGCGACACTTGGCCGACGCAATCTCAAATGTTTCCAACACTGAGATCCCTTTACTTGAAAGTGTAAAAGAAGAAGATGCTTGCAATCTGGCATACAGTTTCCATTGTCAATCTGCCATTCTCAGAATCATGGCATATGAATTGTTTTTGCAGAAAAAGTTGTTGCATGCAGAGTTACTTGGGAAGGATGAATCTAAGGACAAGGAGAAAAATGCCACAAAATCTGACAAATCTAATACCACAGATTTTCATGAACTTAAGGGAATCTGGTCTTCATGGTTCAAAGATTCTGTCTTACAAAAACTAATAAAGTCATATACTTGTTGTGGATATAAGAATGATATATATTATGGTGCAAAGGTGGCCACCAATTCATTCTCTGTTCATGTGATGGAAAAATTAGCTGTTGGTGACTCAGGAAGTTTATCTGTGTCATTGCTTCAGAAGATTCATGGAAACCTCATAAAGTTGAGCATGCATCCTGCTTTCTCTGAATTGTTGTCTCAATACTCACAGCGCGGTTACAGGTTCTATTTCTTAATTTGTATAGTGAGGGAAAAGAACTGA 3726 0.4144 MAETCSVDASLWWDSFTLFFTQLENLSPSSDLPPNLAKKLKENHSWFADLLLRFKPPSQKSKEALNSKKLKIGSHELTVQPELKDKALQISSYLLLDEVQSYILVERSIKNNSVAPSLMFPEFLHMMLIQYYMERQCLLKCIRWILMHAIYIGSISEDNIVREEAKKLFDNQLESKLVSFFEDHLSCSFPEQMDVDLFTLWSEETLIEDNLILDILFLGYYDSFCTCSAEIWKRFCSLYKGILLGDYNLGKLAITTEAQQLSYHTKVQLLLILIETLNLENMLQMVHDERPYRKGVCSFSLNNVQEIDALVSTFSGFEMNEAGPLVLAWAVFLYLLLTLPGKNGTNELMEIDHIGYVRQAFEAGFLRYCLEILECDIFKEYDGPASGYRSVLRTFISAFIASYEVNLQLEDGNPALILDILCKIYHGEESLCTQFWDKESFIDGPVRCLLYNLESEFPVRTLELVRLLSSLCEGTWPAECVYNFLDKSVGVSSLFEISSDSQVDDASHMVEARQAVQVPGVEGFFIPPGTRGRVLKFVGEDTALVRWEYAPSGVFLLLLRLAQDVYLNNKEEVLCTLDLLSRLVSFNTAVCFAVLDISNSLQFHAIGLMNEQIEKNVWVVEIICNLVKNLPLNSCSAALMSMAIKILVTMLICSPANVTTVALNANLFDINLQTAVFSVGNNGFSSGSWLLSSKLARMILTDCEMNSSDCPLAISVLDFTIQLVETGVENDALLALIIFSVQFVLVNHQYWKYKIKQTRWKIMLKVLELMKKCLESMPCYGKLGEIIHKVLFSDSSIHNTLFQIACTTAQALEKLHVSRLFDPMEIEGIQLAIGSVLDILVVMLTRLSKDNSSSFPVFLQAVFSCTTKSVPLITSVTSLISYFRDPAIQLGAVKFISMLFVTADCCQPFSYGTTFFAPDNEEIMDLRRSASYILQEQLLSNEDLFVATLNLFTSAARYQAAFVVAIFAPDAGNEDQHNTGDPKSQSSETSLVPLVSKKSSLLDALMLYIERACDLIKSKPRILLSVLNFMVSLWQGSPQYANLLEILRSYGKFWRHLADAISNVSNTEIPLLESVKEEDACNLAYSFHCQSAILRIMAYELFLQKKLLHAELLGKDESKDKEKNATKSDKSNTTDFHELKGIWSSWFKDSVLQKLIKSYTCCGYKNDIYYGAKVATNSFSVHVMEKLAVGDSGSLSVSLLQKIHGNLIKLSMHPAFSELLSQYSQRGYRFYFLICIVREKN 1241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00948 1241 PANTHER NUCLEOPORIN NUP188 HOMOLOG 10 1205 IPR044840 GO:0017056
Arst3g00948 1241 PANTHER NUCLEOPORIN NUP188 HOMOLOG 10 1205 IPR044840 GO:0017056
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00948 Arst-Chr3 6900031 6914855 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00948 K14311 - gmx:100796560 1860.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g00948 3 6900031 6914855 Arst3g00948 3 6900031 6914855 ECH