Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00940 ATGGTCCCACCGGCGGTGCAATCGCCGAACCCACAACTAACCCAGCAGTTCCTAAGCTCTGTCCTCTCGCAGCGTGGCCCCGCCGCCCTCCCTTACTCCGAAGACACAAAGTGGCTGATCCGGCAGCACCTCGTCGCCGTCACCACCACGTATCCCTCCCTTGAGCCTAAGACCGCCACCTTCACACACAACGACGGCCGCTCCGTCAATCTCCTCCAAGCCGACGGCACAATCCCGATGTCGTTTCAGGGCGTCACTTACAACATCCCCGTTCTCATCTGGCTCATGGAATCTTACCCTCGCCACGCGCCCTGCGTCTACGTTAACCCCACGCGCGACATGATCATCAAGCGCCCCCACCCTCACGTTAATCCCTCTGGCCTCGTCTCCGTCCCTTATTTGCAGAATTGGGTTTACCCTAGCTCCAATCTCGTCGATCTCGTTCGCGATTTGGGTGTTATCTTTGGCCGCGATCCTCCTCTTTATTCCCAGCGTAGGAACCCTCAACCTCCGCCACCTCAAAACCTAAATCCCAATTCAAATTTCGGATCTTTATCGAGTAATTCGGGGAATTCCCAATCTGGTTATGTCCAGCATCTTCAGCATCACCAGCACCCTGCTCCTGCTTCTCCTGCGAGGAATAATTATCCTCCATCACCTTATGGAAGCTTTGGTGGTGGTTCTTCTAGGGTTCAGAATTTGCCCCACACTGAGGATCCAACTGAGGTTTTTAAGAGGAATGCGGTTAATAAGATTGTGGAGATGGTTCATGGTGATGTTACTGCTTTGAGGAAGACCAGGGAGGCTGAGATGGAGGGTTTGTTTAGCTTGCAGGGTGTGTTGAAGCAGAGGGAGGAGGTTCTCAATAAGGGTTTGAAGGAGATGCAGGAGGAGATGGAGGGTTTGGAGCAGCAGTTGCAGATGGTTTTGATGAACACTGATGTTCTTGAAGGGTGGTTGAGGGATAACCAAGGGATGAGGTTCACACTTTATGCATTGGATAAGGCTGTTCAGGTTGGTTCCGTGCCTTTCGATCAGTACTTGAGGAGCGTGAGGGCGCTGTCGAGAGAGCAGTTCTTTCACCGGGCGACAGCCGCAAAAGTTAGAGCTGCTCAGTTGCAGGCTCAGGTTGCTAATATGGCTGTTAGGACACACCATTATGGCAGTTGA 1170 0.5274 MVPPAVQSPNPQLTQQFLSSVLSQRGPAALPYSEDTKWLIRQHLVAVTTTYPSLEPKTATFTHNDGRSVNLLQADGTIPMSFQGVTYNIPVLIWLMESYPRHAPCVYVNPTRDMIIKRPHPHVNPSGLVSVPYLQNWVYPSSNLVDLVRDLGVIFGRDPPLYSQRRNPQPPPPQNLNPNSNFGSLSSNSGNSQSGYVQHLQHHQHPAPASPARNNYPPSPYGSFGGGSSRVQNLPHTEDPTEVFKRNAVNKIVEMVHGDVTALRKTREAEMEGLFSLQGVLKQREEVLNKGLKEMQEEMEGLEQQLQMVLMNTDVLEGWLRDNQGMRFTLYALDKAVQVGSVPFDQYLRSVRALSREQFFHRATAAKVRAAQLQAQVANMAVRTHHYGS 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00940 389 Pfam UEV domain 41 161 IPR008883 GO:0015031|GO:0036211
Arst3g00940 389 SUPERFAMILY UBC-like 27 161 IPR016135 -
Arst3g00940 389 Gene3D Ubiquitin Conjugating Enzyme 5 162 IPR016135 -
Arst3g00940 389 Coils Coil 285 312 - -
Arst3g00940 389 ProSiteProfiles Steadiness box (SB) domain profile. 310 378 IPR017916 -
Arst3g00940 389 MobiDBLite consensus disorder prediction 178 200 - -
Arst3g00940 389 PANTHER TUMOR SUSCEPTIBILITY GENE 101 PROTEIN-RELATED 329 377 - -
Arst3g00940 389 SUPERFAMILY Endosomal sorting complex assembly domain 322 370 IPR037202 -
Arst3g00940 389 MobiDBLite consensus disorder prediction 221 236 - -
Arst3g00940 389 Pfam Vps23 core domain 323 367 IPR017916 -
Arst3g00940 389 MobiDBLite consensus disorder prediction 160 236 - -
Arst3g00940 389 Gene3D - 322 371 - -
Arst3g00940 389 ProSiteProfiles UEV domain profile. 21 165 IPR008883 GO:0015031|GO:0036211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00940 K12183 - gmx:100798165 518.079