Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00899 ATGGCTTTCCGCATTCCAGGTATTAGACGGGCCACATCATTTTCTGCATCAAAGGGAACTAATATTCCAAAAGGCTATCTTGCAGTCTATGTAGGAGATAAGATGAAGAGGTTTGTGATTCCGGTATCATACTTGAATCAACCTTCATTCCAAGAATTACTATGCCAGGCCGAAGAGGAATTCGGATATGATCATCCAACTGGTGGTCTCACAATTCCATGCAGTGAGGAAGAGTTCCAAAACCTCACTTCTGAATTCAGTGGACAGTAA 270 0.4222 MAFRIPGIRRATSFSASKGTNIPKGYLAVYVGDKMKRFVIPVSYLNQPSFQELLCQAEEEFGYDHPTGGLTIPCSEEEFQNLTSEFSGQ 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00899 89 Pfam Auxin responsive protein 16 83 IPR003676 GO:0009733
Arst3g00899 89 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 15 85 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00899 Arst-Chr3 6613361 6613888 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00899 21 82 Calmodulin-binding Proteins AT3G43120 54.839 1.52e-19 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00899 K14488 - gmx:100782363 143.665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g00899 3 6613361 6613888 Arst3g00899 3 6613361 6613888 ECH