Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00894 ATGAACATCTCTTTATGCATCATAACACTACTACTGTTGCACTTAGGCTTATTTTTAGGGGCAAGCTTAGCCTACTCCTCAAGCTTCAACTATGGTGATGCTGTTGACAAGAGCTTGATGTTCTTTGAAGCTCAAAGGTCTGGTAAATTGCCACCTCAGCAGCGAGTCAAGTGGCGTGGTGATTCTGGCCTCAATGATGGACTTTCACAAGGAGTGGACCTTGTGGGAGGGTACTATGATGCTGGGGATCATGTGAAGTTTGGGCTGCCAATGGCATATAGTGTGACAATGCTTGCATGGGGAGCCATTGAGTTCAGAAAAGAGATCACTGACTTGAACCAAATGGGACACACTTTATGGGCCATTAAATGGGGAACTGATTACTTCCTCAAAGCACATCCTCAGCCTAATGTTCTTTGGGGACAGGTGGGGGATGGAGCCTCGGATCACTATTGCTGGGAGCGTGCTGAAGACATGACAACTTCAAGAACTGCCTATAAAGTTGATGAAGAGCATCCTGGCTCTGATATTGCAGGTGAAACTGCAGCTGCATTGGCTGCAGCATCCATAGCCTTCAAGCCCTACAACTCTTCTTACTCTAATCTTCTCCTAATTCATGCAAAACAGCTCTTCACATTTGCAGATAGGTTCAGGGGTCTATATGATGATTCCATAACTAGTGCTCAGCAATTCTACACTTCTTCCGGTTACTCAGATGAACTATTATGGGCTGCAGCATGGTTGCATCAAGCAACTGATGATGAATACTACCTAAAGTATGTAGTGGACAATGCTGTGTACATGGGTGGAACTGGCTGGGCAGTGAAGGAGTTCTCTTGGGACAATAAATATGCCGGTGTACAAATCCTCTTGTCGAAGGTGTTACTAGAAGGAAAGGCTGGTTCATATGCCTCTACACTGAAGCAGTACCAAGCCAAGGCAGATTATTTTACCTGTGCTTCCTTGCAAAAGAATGATGGTTACAATGTCCAGAAGACTCCAGGTGGTCTAGTATACGTGCGCGAATGGAACAACATGCAGTATGTTTCTTCTTCTGCATTTCTCTTGGTTGCTTACTCTAAGTATCTATCAGATGCAAAAACTCAGATTAATTGTCCAGATGGACAAGTTCAGCCTCAGGAGCTCCTCAATTTTGCAAAATCACAGGCTGATTACATCCTTGGCAAAAACCCTGAGGGTATGAGCTACTTGGTTGGATCTGGACCATATGGTGCCTTTGTGGGTGGTCCTGATAAAAATGATGAGTTCTCTGATGACAGATCAAATTATGAACAAACTGAGCCTACACTTTCAGGATCAGCTCCTCTTGTAGGCATCTTTGCTAAGCTGCAGAGTTTATATGGCAATTCAGGTTACTACCATAAGGAATCATCAGTGCCCCACCCCAAAACACCAAATACCACAAGCTCATGGAAAACATCATTGTCTAAAACATTAGAAGGTGCACCAATTGAGTTCCTTCACTCAATTACTAGCTCATGGACTGTTGGGGCTACAACTTATTACCGCCACAGAGTGATCATCAAGAACACTTCTTTGGAGCCAATAACAGATCTCAAGTTGGTGATTGAGAATCTCTCAGGATCTATATGGGGTCTATCTCCAACAAATGAGAAGAACATTTATGAACTTCCACAATGGCTCAATGTCTTGAATCCTGACTCAGAGTGTATGTTTGTTTATGTTCAAGAAGGACCACAAGCAAAGATCAGTGTTCAAAGCTTCCATTGA 1752 0.4355 MNISLCIITLLLLHLGLFLGASLAYSSSFNYGDAVDKSLMFFEAQRSGKLPPQQRVKWRGDSGLNDGLSQGVDLVGGYYDAGDHVKFGLPMAYSVTMLAWGAIEFRKEITDLNQMGHTLWAIKWGTDYFLKAHPQPNVLWGQVGDGASDHYCWERAEDMTTSRTAYKVDEEHPGSDIAGETAAALAAASIAFKPYNSSYSNLLLIHAKQLFTFADRFRGLYDDSITSAQQFYTSSGYSDELLWAAAWLHQATDDEYYLKYVVDNAVYMGGTGWAVKEFSWDNKYAGVQILLSKVLLEGKAGSYASTLKQYQAKADYFTCASLQKNDGYNVQKTPGGLVYVREWNNMQYVSSSAFLLVAYSKYLSDAKTQINCPDGQVQPQELLNFAKSQADYILGKNPEGMSYLVGSGPSXGAFVGGPDKNDEFSDDRSNYEQTEPTLSGSAPLVGIFAKLQSLYGNSGYYHKESSVPHPKTPNTTSSWKTSLSKTLEGAPIEFLHSITSSWTVGATTYYRHRVIIKNTSLEPITDLKLVIENLSGSIWGLSPTNEKNIYELPQWLNVLNPDSECMFVYVQEGPQAKISVQSFH 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00894 584 Pfam Carbohydrate binding domain CBM49 492 571 IPR019028 GO:0030246
Arst3g00894 584 MobiDBLite consensus disorder prediction 415 436 - -
Arst3g00894 584 Gene3D - 26 465 IPR012341 GO:0005975
Arst3g00894 584 SMART CBM49_2 492 574 IPR019028 GO:0030246
Arst3g00894 584 Pfam Glycosyl hydrolase family 9 31 409 IPR001701 GO:0004553|GO:0005975
Arst3g00894 584 PANTHER ENDO-1,4-BETA-GLUCANASE 18 409 - -
Arst3g00894 584 SUPERFAMILY Six-hairpin glycosidases 28 462 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00894 Arst-Chr3 6575443 6580063 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00894 29 584 Glycoside Hydrolase AT1G48930 65.557 0.0 751
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00894 K01179 - gmx:100812170 932.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g00894 3 6575443 6580063 Arst3g00894 3 6575443 6580063 ECH