Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00886 ATGGCGACAGAGGGAGGAGAAGCTGCCACGGATAACGAAGTAAATGTTGCTTTCGAAGAAGAAGAGAAGCAAAATCAGACCGAAGTTGATGATGCAGAAGCAGAAGAAGACAATGATAACGATGAAGGAGGAGGAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAGGCCGAGGAGGAGGAGGAGGAGGAGGGAGAGGGCGAATACACTTTCAGATTCACCAACGGAATGAGTCATTTGGATTTCGTTCGAAACAACGATTCCGACGTCCAACGTTACCAGCAATTCGAGCTCCTTGAGCATCAAGCTCTCGCTGATAGAAAGCGCAAAGCCCTTTCACTTTCAGATTCTCATCAGGAAGAGACTCCTTCAAAGAAGGCGAGGGAAGATGATAATCCTGGGGCAACCATGGCTGAGATAATGGAAGCAATGAATTTTGGCGCACGCAGGAGATCAAGAAAGCAAAAGAAAAGAGGTAGGCGAAAAGGATCAAGGAATAAGCTAAACCCACAGATAACAAGAATGCTCGGTGATGCGACGCTTCACTACGTTTGTCGCCGTTATGACCAGGCTATAGCTGTCTCGCATGAAGTTATTAGGCTGGCACCAAATGTGGCTGATTCGTATCACACCCTTGGACTTGTCTATTATGACCTTGAGGATTACAAAAGGGCGATGGATTTTTACATGATTGCTGCTCATTTGACACCTAAAGATTCATCCCGTTGGAAAATGCTTTATGACTGGTCCAGAGAACAAGGTGATATTGGTCAAGCCAGTTACTGCCTTTCCAAAGCGATAACAGCAGATCCCAAGGACGAGAGTCTTAGGAAAGAACGTGCAATGTTTTATGTTGAGCTTGGAGATTATCAAAAAGCTGCTGCTGCATATGAGCAAGTACATCACCTTTGTCCTGAGAATGTTGAAGCACTAACAGAAGCAGCTAAGTGCTACCAAAAATGTGGTCAAGTAGCCTGTTCAATCGAAATTCTTGAAGATTATCTAAGGAGTCAACCAGACAAAGCTCATGCAAGCTTAGTTGACCTATTGGCTACTATATACATGGAAACTAAGGCACATGACAGAGCTCTTCAGCATATTGAGCATGTTCGAATAGTAAATTCAGGGGAAGAAATGCCTTTGAACCTGAAAATTAAGTCTGGAATCTGCCATGCTCATCTTGGAAACATGGAGAGGGCTCAGGCTTGCTTCAGTGACATAAAACCAGAGAATGCAATTGAACATGTTGAGTTGGTCACAGCGGCTGCAGACTCCTTAATGGAACTTGAGCATTATGACTCCGCATTGAGTTATTATTTGATGCTGGAAGGCAATGGTGGAAGTGAACATGGTCTTCTGTATCTGAAAATTGCTAGGTGTTATCTATCCTTGAAAGAAAGGTTACAAGCAATTCACTTTTTTACCAAAGCCCTAGAAACACTACAAGATGATGTTGATGCACGCATTACGTTGGCTTCCCTTTTGATTGAAGAAGGGAAAGAAGATGAAGCCATTTCTTTGCTTTCTCCTCCAAAGGATTCTGGTAAATACCATGAACTCTTCTTTTTTTGCTTTGAAGCACATTCTGTAAAGCCAAATAAATGGTGGGTTAATGAAAGGATAAAACTGAAGCTTTGCAATATATATTGGAATAAAGGGTTGCTAGATGATTTTGTGGATGCAATTTTTCCTATGATACGTGAATCATTGTATGTCGCAACCCTTCGACAGAGGGGTAAATCGAAAAAACGCCTCTCTACACGAGACCTGGTTGAAAGGGTTAGGGTAATGAATGCTCCAGAAAAGGATAATGTATTTCAAGGATTCAGGCCTATAGCTACTCCTTCTGATAGGTCTGACCGGTGGAAAGCTTCCAGGGCAAAACGATCACTTCAAAAGAAGGAAATTGAGAAGGAGAAAAAGAAAGCTGAGGCATTGGCTGCTGGAATTGACTGGCTGAGCGATGATTCGGATATTGAACCTCAGAGAGTACGCAAAGAACCTCCATTATGTAATCTTCTCAAGGATGAAGAGCATCACCAGCTAATAATTAATTTGTGCAAGGCATTAGCTTCCTTACAAAGGTATTGGGAAGCCTTGGAGATTATAAATATTACTCTCAGATTGACTCATTCTGCACTTTCTGCTGACAAGAAAGAGGAACTTCGATCTCTTGGAGCTCAAATGGCATACAACACCACGGATCCTAAGCATGGGTTTGATTGTGTAAAATACATTGTTCAGCAACATCCGTACAGTGTTGCTGCTTGGAATTGCTACTACAAGGTTATGTCTAGATTGGAAAATCGAGATACAAGACACTCCAAGTTTATACTTAATATGCAAGGAAAGTTCGTGGATTGTGTACCTCCTATTCTCATTTCTGCTAATCAGTATACTATAATTAGCCATCACCAAGATGCTGCAAGGAAATACTTAGAAGCTTATAAACTTCTGCCAGAGAATCCCTTGGTTAATCTTTGCGTTGGAACTGCCTTGATCAACCTAGCATTGGGTTTAAGACTTCAAAATAAGCATCAGTGTGTTGTACAAGGTTTAGCGTTCCTCTATAACAATTTAAGGATCTGCGACAACAGCCAGGAATCATTGTACAACATAGCTAGGGCGTTCCATCATGTTGGTCTTGTAACTTTGGCAGCTTTCTATTATGAGAAAGTACTTGCTATTCGTGAGAAGGACTATCCCATTCCAAAACTTCTCAATGAAACACCGGATATTGCTGAAAATCACAAACCCGGTTACTGTGATCTTCGCAGAGAGGCTGCTCACAATCTGCACCTGATCTACAAGAAGAGTGGAGCTCTTGATCTTGCTAGACAAGTTCTAAAAGATCATTGCACCTTCTGA 2865 0.4192 MATEGGEAATDNEVNVAFEEEEKQNQTEVDDAEAEEDNDNDEGGGGEEEEEEEEEAEEEEEEEGEGEYTFRFTNGMSHLDFVRNNDSDVQRYQQFELLEHQALADRKRKALSLSDSHQEETPSKKAREDDNPGATMAEIMEAMNFGARRRSRKQKKRGRRKGSRNKLNPQITRMLGDATLHYVCRRYDQAIAVSHEVIRLAPNVADSYHTLGLVYYDLEDYKRAMDFYMIAAHLTPKDSSRWKMLYDWSREQGDIGQASYCLSKAITADPKDESLRKERAMFYVELGDYQKAAAAYEQVHHLCPENVEALTEAAKCYQKCGQVACSIEILEDYLRSQPDKAHASLVDLLATIYMETKAHDRALQHIEHVRIVNSGEEMPLNLKIKSGICHAHLGNMERAQACFSDIKPENAIEHVELVTAAADSLMELEHYDSALSYYLMLEGNGGSEHGLLYLKIARCYLSLKERLQAIHFFTKALETLQDDVDARITLASLLIEEGKEDEAISLLSPPKDSGKYHELFFFCFEAHSVKPNKWWVNERIKLKLCNIYWNKGLLDDFVDAIFPMIRESLYVATLRQRGKSKKRLSTRDLVERVRVMNAPEKDNVFQGFRPIATPSDRSDRWKASRAKRSLQKKEIEKEKKKAEALAAGIDWLSDDSDIEPQRVRKEPPLCNLLKDEEHHQLIINLCKALASLQRYWEALEIINITLRLTHSALSADKKEELRSLGAQMAYNTTDPKHGFDCVKYIVQQHPYSVAAWNCYYKVMSRLENRDTRHSKFILNMQGKFVDCVPPILISANQYTIISHHQDAARKYLEAYKLLPENPLVNLCVGTALINLALGLRLQNKHQCVVQGLAFLYNNLRICDNSQESLYNIARAFHHVGLVTLAAFYYEKVLAIREKDYPIPKLLNETPDIAENHKPGYCDLRREAAHNLHLIYKKSGALDLARQVLKDHCTF 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00886 954 MobiDBLite consensus disorder prediction 108 168 - -
Arst3g00886 954 MobiDBLite consensus disorder prediction 24 66 - -
Arst3g00886 954 Pfam Tetratricopeptide repeat 285 345 - -
Arst3g00886 954 ProSiteProfiles TPR repeat profile. 273 306 IPR019734 GO:0005515
Arst3g00886 954 FunFam General transcription factor 3C polypeptide 3 583 953 - -
Arst3g00886 954 Gene3D Tetratricopeptide repeat domain 147 377 IPR011990 GO:0005515
Arst3g00886 954 Gene3D Tetratricopeptide repeat domain 380 561 IPR011990 GO:0005515
Arst3g00886 954 SUPERFAMILY TPR-like 792 902 IPR011990 GO:0005515
Arst3g00886 954 Gene3D Tetratricopeptide repeat domain 594 951 IPR011990 GO:0005515
Arst3g00886 954 ProSiteProfiles TPR repeat region circular profile. 205 238 - -
Arst3g00886 954 PANTHER TRANSCRIPTION INITIATION FACTOR IIIC TFIIIC , POLYPEPTIDE 3-RELATED 13 954 IPR039340 GO:0006383
Arst3g00886 954 ProSiteProfiles TPR repeat profile. 205 238 IPR019734 GO:0005515
Arst3g00886 954 MobiDBLite consensus disorder prediction 149 166 - -
Arst3g00886 954 Pfam Tetratricopeptide repeat 205 229 IPR019734 GO:0005515
Arst3g00886 954 MobiDBLite consensus disorder prediction 1 70 - -
Arst3g00886 954 Coils Coil 47 67 - -
Arst3g00886 954 Coils Coil 623 643 - -
Arst3g00886 954 MobiDBLite consensus disorder prediction 108 134 - -
Arst3g00886 954 SMART tpr_5 866 899 IPR019734 GO:0005515
Arst3g00886 954 SMART tpr_5 343 376 IPR019734 GO:0005515
Arst3g00886 954 SMART tpr_5 273 306 IPR019734 GO:0005515
Arst3g00886 954 SMART tpr_5 450 483 IPR019734 GO:0005515
Arst3g00886 954 SMART tpr_5 171 204 IPR019734 GO:0005515
Arst3g00886 954 SMART tpr_5 205 238 IPR019734 GO:0005515
Arst3g00886 954 Coils Coil 15 38 - -
Arst3g00886 954 SUPERFAMILY TPR-like 179 523 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00886 186 362 Glycosyltransferase AT3G04240 23.729 5.62e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00886 K15201 - gmx:100804533 1315.06