Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00885 ATGGCTGAAGAAAAAGGTTTAACTGTTGATGAAGATGGATATAATAAGGCCTTGGAGGCTGCAAGAGAGCGATCAAGGAATGCTCAAGCAACGCAAGCAGGTGGTGCCATTATCATGGATGCTGATGCTACCTCAGTGTTGCATAGAAGGGGCATTGCTCCAACTGATGATAGCTTCAAATATGTTTGGTTCAAGGACCACGAGAGTGTGGTGAAAGCAATATACACTGGTTCTGAGTTTGTTGAATCTGTTGAAACTGATGGTGACATTGGTGTCGTTCTTGAATCTACAAGTTTCTATGCTGAACAAGGTGGTCAGATTTTCGACACTGGATCACTGGAGGGTCCACATGCATCATTCAAAGTTCACAACGTACAAGTATTTGGAGGATTTGTTCTCCACATTGGTTCTAATGGGAATGGAATCTCTGTTGGTGACAAAGTTGTATGCAAGGTTGATTATGGTAGGCGTTCCCTTATAGCCCCCAACCATACCTGCACACACATGTTAAACTTTGCTCTTAGGGAAGTACTTGGGGATCATGTTGACCAGAAAGGATCCATTGTTCTTCCTGAAAAATTGAGATTTGATTTTTCTCATGGCAAGCCTGTTGATCCCGACAATTTGAGGAAAATCGAATCAATTGTTAATGAGCAAATTAGGGATGAATTAGATGTCAATGCAAAGGAGGCAACTCTTGCTGAAGCCAAGCGTATTAATGGCTTACGAGCTGTGTTTGGAGAAGTTTATCCTGATCCCGTAAGAGTTGTATCAATCGGAGAAAAAGTTGAGGATCTCCTTGCCGACCCTGAAAATAAAAAATGGTTATCTATTTCATCAGAATTATGTGGTGGCACCCATATATCAAACACAAGAGAGGCCAAAGCTTTTGCTCTTTTATCTGAGGAGGGAATTGCAAAGGGAATACGCAGAATAACAGCTGTGACAACTGATCGTGCTTCTGATGCAATAAGAGTTGCAAATGAATTTGAGCAACACGTAGACAATGCAGCCAAGTTAGAGGGAAGTTCACTGGAAGAGAAAGTTTTGTACCTGAAAAGCAATGTGGAAACCTTATCTATTCCTGCAGCCAAGAAAGCTGACATAAAGAACAAGATAGTCCAACTTCAGGATCGGGTGAGAAAAGCACAAAAGCAAATTGCTGAAGAAAATAAACGTAAAGCTGTGACGATTACAGCTGAGAAGGCTGAACTTGCTGCATCAGATGGGAAAACATTTTGCGTGTCCCAGGTTGAAGTTGGTCTGGATGTAAACGCAGTGCGTGAAGCAGTTACAAAAGTCATGGAGCAGAAGGGTATATCTGTTATGGTATTTAGCACTGACAAGTCTACAAACAAGGCTGTAGTTTGTGCTGGCGTGCCGGAGAAAGGTGATAAAGGCAAGCTGGATGTTACAGAGTGGTTAACCAACGCTTTAGGGCCTCTGAAAGGGAGATGCGGTAAAGGAAAAGGTGGTCTTGCAACAGGCCAGGGTACAGATGCATCACATGTAAGTGAGGCTATGGATCTTGCAACATCATTTGCATCAATGAAATTGACTTAA 1563 0.4235 MAEEKGLTVDEDGYNKALEAARERSRNAQATQAGGAIIMDADATSVLHRRGIAPTDDSFKYVWFKDHESVVKAIYTGSEFVESVETDGDIGVVLESTSFYAEQGGQIFDTGSLEGPHASFKVHNVQVFGGFVLHIGSNGNGISVGDKVVCKVDYGRRSLIAPNHTCTHMLNFALREVLGDHVDQKGSIVLPEKLRFDFSHGKPVDPDNLRKIESIVNEQIRDELDVNAKEATLAEAKRINGLRAVFGEVYPDPVRVVSIGEKVEDLLADPENKKWLSISSELCGGTHISNTREAKAFALLSEEGIAKGIRRITAVTTDRASDAIRVANEFEQHVDNAAKLEGSSLEEKVLYLKSNVETLSIPAAKKADIKNKIVQLQDRVRKAQKQIAEENKRKAVTITAEKAELAASDGKTFCVSQVEVGLDVNAVREAVTKVMEQKGISVMVFSTDKSTNKAVVCAGVPEKGDKGKLDVTEWLTNALGPLKGRCGKGKGGLATGQGTDASHVSEAMDLATSFASMKLT 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00885 520 Coils Coil 366 393 - -
Arst3g00885 520 FunFam Alanine--tRNA ligase 408 515 - -
Arst3g00885 520 Gene3D - 153 330 - -
Arst3g00885 520 ProSiteProfiles Alanyl-transfer RNA synthetases family profile. 1 326 IPR018165 GO:0003676|GO:0004813|GO:0005524|GO:0006419
Arst3g00885 520 FunFam Alanine--tRNA ligase 54 151 - -
Arst3g00885 520 Pfam tRNA synthetases class II (A) 1 154 IPR018164 GO:0000166|GO:0004813|GO:0005524|GO:0006419
Arst3g00885 520 Pfam Threonyl and Alanyl tRNA synthetase second additional domain 254 312 IPR012947 GO:0004812|GO:0005524|GO:0043039
Arst3g00885 520 SUPERFAMILY Translation proteins 78 152 IPR009000 -
Arst3g00885 520 Gene3D - 406 515 - -
Arst3g00885 520 FunFam Alanine--tRNA ligase, cytoplasmic 153 328 - -
Arst3g00885 520 SMART tRNA_SAD_4 254 313 IPR012947 GO:0004812|GO:0005524|GO:0043039
Arst3g00885 520 SUPERFAMILY ThrRS/AlaRS common domain 152 328 IPR018163 GO:0000166
Arst3g00885 520 Pfam DHHA1 domain 374 513 IPR003156 GO:0003676
Arst3g00885 520 Gene3D - 62 152 - -
Arst3g00885 520 PANTHER ALANYL-TRNA SYNTHETASE 1 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00885 Arst-Chr3 6466113 6470741 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00885 K01872 - gmx:100788271 845.884