Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00793 ATGGAAACTCGGAGCCGGAAGCGGGCGGAGGCTTCCTCAGCTGCCCCTTCATCTTCCTCCTCTGTTCCCACCACTCGTTCCAGCAAGCGCGCACGCCTCAGCCACAACAACGCAAACAACAGCAACAACAACTCTTCCTCTTCTTCTTCCGTCGCAGCCACCGCACCCGCCGCCACAAAAGCAGTCACCACTCGTTCCCGCGCAGCGTCTCGTTCCACCGCCAAGGATCCCTTACCGCCTAAGAACCCTAATCCTCCTCTCCCTCCTCCGATGGACTCAACCAACGAATCATCAGGCTCGCGCAGAAATCGCGGGAAGAATTCCGCCGATAGAGACAATTCCGACAAGGGGAAAGAGAAGGAGCACGATGTCAGGGTCAGGGAAAGGGATGCCGAAAGAGGATTGGCATTGAACATGGAAACTGGAGGCGTTGGAGACGATGATGATGATAGCGAGGGCGGAGTTGGGATTCTGCATCAGAACTTGACATCAGCCAGCAGTGCCCTTCAGGGCCTTCTTCGGAAACTCGGCGCTGGTTTGGACGATCTGCTTCCATCATCGGCCATGGGTTCGTCTTCGGCCTCTCATCAGAGTGGGAGACTGAAGAAAATCCTTTTTGGGTTGAGGGCAGATGGAGAAGAAGGTAGACAGGTGGAGGCATTGACGCAGCTGTGTGAGATGCTCTCGATTGGGACTGAGGAATCGCTCAGCACTTTCTCTGTTGATTCGTTTGTTCCTGTGCTTGTTGGGTTGCTGAATCATGAGAGTAACCCTGATATCATGCTCCTTGCTGCACGGGCGCTTACACATCTCTGTGATGTGTTGCCTTCATCTTGTGCCGCGGTTGTGCATTATGGTGCTGTGTCAATATTCTGTGCGAGGTTGCTTACCATAGAGTATATGGACTTAGCTGAGCAGTCTCTTCAAGCACTAAAGAAGATATCTCAGGAGCACCCAACTGCATGCCTTCGAGCTGGTGCACTTATGGCTGTGCTTTCTTATTTGGATTTCTTTTCTACAGGAGTTCAGCGGGTGGCATTGTCCACTGCTGCAAATATGTGCAAGAAGCTTCCTTCGGATGCAGCTGACTTTGTGATGGAAGCCGTTCCTCTTCTGACCAATCTCCTTCAGTACCATGATGCGAAGGTCCTGGAGCATGCCTCTGTATGTTTGACTCGAATAGCTGAAGCATTTGCATCATCTCCGGACAAATTAGATGAACTGTGTAATCATGGACTAGTAACACAAGCTGCTTCCCTGATTTCAACCAGCAGTTCTGGAGGTGGACAAGCTTCCCTCAGCACATCAACATATACTGGTTTAATACGACTTCTTTCAACCTGCGCAAGTGGGTCACCTCTTGGGGCTAAAACTTTGCTTCTCCTGGGAATCAGTGGTATTCTTAAAGATATTCTATCTGGGTCTGGAGTTTCTTCAAGTGTTTCCGTGTCTCCTGCATTGAGTAGGCCGCCAGATCAGATATTTGAGATTGTGAACCTTGCAAATGAGCTTCTGCCCCCATTGCCACAAGGAACAATTTCCCTCCCTGTAAGTACCAACATGTTTGTTAAAGGGCCTGTTATAAGAAAGCCTCCTACTGGAAGTTCTGGGAAACAAGAAGACACAAACGGAAATGCTCCTGAGATATCTGCTCGGGAGAAACTACTAAATGATCAGCCCGAGTTACTTCAGCAATTTGCAATGGATCTCCTCCCAGTTTTAGTACAGATTTATGGTTCTAGTGTTAATGGTCCAGTTCGGCATAAATGCCTTTCTGTAATTGGAAAACTGATGTATTTCAGTACAGCTGAGATGATCCAGTCTTTGTTGAGTGTGACAAATATATCAAGTTTCTTAGCCGGTGTCCTAGCCTGGAAAGATCCACATGTTCTAGTTCCTGCCTTGCAAATTGCTGAAATTCTTATGGAAAAGCTTCCTGGGACATTTTCTAAGATGTTTATCAGAGAAGGTGTTGTCCATGCAGTGGACCAACTTATTTTGGCTGGTAATTCAACAAGTGTCCCTGCACAAGCATCTTCTGCCGAGAAGGAGAATGATTCTGTATCTGGAGCATCATCTCGCTCTAGGCGTTATCGTCGCCGTAGTGGTAACAACAATCCTGATGGAAATCCCATGGATGATTCTAAGAGTCCAGTTTCGGGAAATGTTGGTTCACCTCCTGGTTCTGTGGATATTCCAGCAGTAAATTCTAGTATCCGGTCATCTGTCAGCACAGCTGCAAAAGCTTTTAAAGACAAGTACTTTCCTTCAGATCCTGGGGCTGCTGAAGTGGGTGTTACTGATGATCTGTTGTGTCTGAAAAATCTCTGCACAAAATTAAATGCTGGTGTTGATGATCAAAGGTCTACTGGAAAGGGGAAATCAAAAACTACAGGATTTGTTGTGGAAGAGATTTCTGCTAACAAGGAAGATTATTTGATTGGGGTTATCTCTGACATGCTAAAGGAACTTGGCAAAGGGGATGGTGTATCTACTTTTGAATTTATTGGCAGTGGTGTTGTTGCAGCTTTGCTCAATTATTTTTCTTGTGGAAATTTCTCCAAGGACCGAACCTCTGAAACCAACCTTCCCAAGCTTCGCCAGCTAGCACTTACAAGGTTTAAGTTATTTATAGCTGTCGCACTTCCTCCTAGTACTCATGAGGGTTCTGTTGCTCCAATGACTGTCTTGGTCCAGAAGCTTCAAAATGCATTATCTTCCTTAGAGCGTTTCCCTGTGGTTCTTAGCCATTCATCTAGGTCTTCTAGTGGAAGTGCACGCCTCTCTTCTGGACTAAGTGCTTTGTCTCAACCCTTTAAGTTGCGTCTCTGTCGAGCCCAGGGTGAAAAGTCACTCAAGGACTATTCATCGAATGTTGTGCTGATTGATCCATTGGCATGTCTAGCAGCGATTGAGGAATTTCTTTGGCCCCGTATCCAGCGAAGTGAATCTGGTCAGAAGGTGTCCATACCAGCTGGGAACTCTGAATCTGGTACAACTCCTGCACAGGCTGGCGTTCCATCACCTTCTACGTCTACTCCATCCACTACCCGTCGTCATTCTACCAGATCTAGATCATCCGTTAATATAGGTGATACAGCAAAAAAGGAGACAACTCCAGATAAAGGCACAAGCTCGTCTAAGGGCAAGGGAAAAGCTGTTTTAAAGCCAGCACAAGAAGAGGCAAGAGGGCCTCAAACCAGGAATGCAGCACGCAGAAGAGCAGCTCTTGATAAAGAAGAGCAAATGAAGCCGGTAAATGGCGACTCCACTTCCGAGGATGAGGAACTGGATATTTCCCCTGTTGAGATCGATGAGGCATTGGTGATTGAAGATGATGACATCTCTGATGACGAAGATGATGACCATGAAGATGTTTTGAGGGATGATTCTCTTCCTGTTTGCTTGCCTGACAAAGTACATGATGTGAAATTGGGTGACTCGGCTGAAGAGAGTAGTGCTGCTCCCGCTACAGGTGATGGCCAGACTAATGCTGCCTCAGGTTCTAGCAGCAAAGTTGGTACTGCTAGGGGATCGGACTCGGCTGATTTTAGGAGTAGCTATTCATCTGGTTCAAGAGGTGCAATGTCCTTTGCTGCTGCTGCCATGGCAGGACTTGGATCTGCTAATAACAGAGGTATCAGGGGTGGTAGGGATAGGCAAGGACGACCACTGTTCAGTAGTTCTAATGAACCTCCGAAGTTGATCTTTACTGCTGGTGGGAAGCAGCTTAACAGGCATTTGACTATATATCAAGCGATTCAAAGACAACTGGTGCTAGATGAAGATGATGATGAGAGGTTTGGTGGCAGTGACTATGTCTCCAGCGATGGAAACAGGCTATGGGGTGATATTTACACCATAACTTATCAGAGGGCAGATAGCCAAACGGATAGGGCTTCCACTGGTGGTTCAAGTTCTAATGTGTCAAAATCTGCCAAATCTGGTTCTGTGTCGAATTCTAGTACTGAACCAAAGCTTCATCAGGCATCCGTTCTTGATAGCATTTTGCAGGGAGAATTGCCTTGTGAGCTTGAGAAATCTAATCCTACATACAATATATTGGCGCTATTGCGTGTTTTGGAGGGTTTGAACCAGCTTGCACCTCGCTTGAGGGCCCAGGTCATTACTGAGAGTTTTGCTGAGGGGAAGCTTTCAAATTTAGATGAGTTAGGTGTTACCACTGGTGCAAGAGTTACTTCAGAAGAATTCATAAGCAGCAAATTAACTCCAAAATTAGCTAGGCAGATACAAGATGCCCTTGCCCTGTGTAGTGGGAGTCTTCCCTCATGGTGTTACCAGTTAACTAAAGCATGCCCATTTTTGTTTCCTTTTGAGACCAGGCGACAGTACTTTTATTCAACTGCCTTTGGGTTATCCCGTGCCCTGTATCGACTTCAACAGCAGCAGGGTGCTGATGGTCATGGATCAGCAAATGAAAGAGAGGTAAGGGTTGGGAGATTGCAGCGTCAAAAGGTTCGTGTCTCTCGAAACCGCATATTGGATTCTGCTGCTAAAGTGATGGAGATGTATTCTAGCCAAAAGGCTGTACTTGAAGTTGAATATTTTGGTGAAGTTGGTACTGGCCTTGGTCCCACACTTGAGTTTTATACACTTCTAAGTCATGACTTGCAAAAAGTTGGACTACAAATGTGGAGATCAGATTCCTCAGAGAAATATCAAATGGAAATTGATGGAGATGAAAAGAAAATGAAAAGCAGTGAAGGTTCTCTTGCTGGTGATGGAGAACTTGTTCAAGCTCCTCTTGGGTTGTTTCCACAGCCTTGGCCTTCAAATGCCGATGCAACAGAGGGTAGTCAGTTTTCCAAGGCAATCGAGTATTTCCGACTTTTGGGCCGTGTGGTTGCTAAAGCTCTCCAGGATGGACGTCTATTGGATTTGCCCTTGTCAGTGGCATTTTATAAGCTTATTCTTGGTCAAGAGCTTGATTTGCATGACATTCTTTTCATTGATGCTGAGCTTGGAAAAACTTTGCAAGAGTTGAATGCACTTGTCTGCCGGAAATATTATCTAGAATCTACTGGTGGTAGTTACACCGATGTGAATAGTAATTTACATTTTCGTGGGGCTCCGGTTGAAGACCTCTGCTTGGATTTTACTCTTCCTGGCTATCCTGAGTACATCTTGAAATCAGGAGATGAAATTGTTGACATTAATAATTTGGAAGAGTATATATCTTTGGTGGTTGATGCAACTGTCAAGACTGGGATCACACGTCAAATGGAAGCATTTAAAGCAGGATTCAACCAGGTTTTTGACATATCGTCTTTGCAAATTTTTACTCCTCAAGAACTGGACTACCTGCTTTGTGGTCGTAGGGAGATGTGGAAGGCTGATACACTAGTTGACCATATAAAATTTGACCATGGATACACTGCCAAGAGCCCTGCCATAGTCAATTTACTTGAAATTATGGGAGAGTTTACACCAGAACAGCAACGCGCTTTCTGTCAATTTGTTACTGGTGCACCTAGGCTACCCCCTGGTGGACTGGCAGTTCTAAATCCGAAACTAACTATTGTGAGGAAGCTTTCGTCAACTGCAGCCAATGCTTCGTCTAATGGGAATGGGCCTTCGGAATCAGCAGATGATGACTTGCCAAGTGTGATGACATGTGCTAATTACCTGAAGCTTCCTCCTTATTCTACCAAGGAAGTTATGTCCAAGAAGCTACTCTATGCAATCAATGAAGGGCAGGGATCATTTGATTTATCATGA 5739 0.4576 METRSRKRAEASSAAPSSSSSVPTTRSSKRARLSHNNANNSNNNSSSSSSVAATAPAATKAVTTRSRAASRSTAKDPLPPKNPNPPLPPPMDSTNESSGSRRNRGKNSADRDNSDKGKEKEHDVRVRERDAERGLALNMETGGVGDDDDDSEGGVGILHQNLTSASSALQGLLRKLGAGLDDLLPSSAMGSSSASHQSGRLKKILFGLRADGEEGRQVEALTQLCEMLSIGTEESLSTFSVDSFVPVLVGLLNHESNPDIMLLAARALTHLCDVLPSSCAAVVHYGAVSIFCARLLTIEYMDLAEQSLQALKKISQEHPTACLRAGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPSDAADFVMEAVPLLTNLLQYHDAKVLEHASVCLTRIAEAFASSPDKLDELCNHGLVTQAASLISTSSSGGGQASLSTSTYTGLIRLLSTCASGSPLGAKTLLLLGISGILKDILSGSGVSSSVSVSPALSRPPDQIFEIVNLANELLPPLPQGTISLPVSTNMFVKGPVIRKPPTGSSGKQEDTNGNAPEISAREKLLNDQPELLQQFAMDLLPVLVQIYGSSVNGPVRHKCLSVIGKLMYFSTAEMIQSLLSVTNISSFLAGVLAWKDPHVLVPALQIAEILMEKLPGTFSKMFIREGVVHAVDQLILAGNSTSVPAQASSAEKENDSVSGASSRSRRYRRRSGNNNPDGNPMDDSKSPVSGNVGSPPGSVDIPAVNSSIRSSVSTAAKAFKDKYFPSDPGAAEVGVTDDLLCLKNLCTKLNAGVDDQRSTGKGKSKTTGFVVEEISANKEDYLIGVISDMLKELGKGDGVSTFEFIGSGVVAALLNYFSCGNFSKDRTSETNLPKLRQLALTRFKLFIAVALPPSTHEGSVAPMTVLVQKLQNALSSLERFPVVLSHSSRSSSGSARLSSGLSALSQPFKLRLCRAQGEKSLKDYSSNVVLIDPLACLAAIEEFLWPRIQRSESGQKVSIPAGNSESGTTPAQAGVPSPSTSTPSTTRRHSTRSRSSVNIGDTAKKETTPDKGTSSSKGKGKAVLKPAQEEARGPQTRNAARRRAALDKEEQMKPVNGDSTSEDEELDISPVEIDEALVIEDDDISDDEDDDHEDVLRDDSLPVCLPDKVHDVKLGDSAEESSAAPATGDGQTNAASGSSSKVGTARGSDSADFRSSYSSGSRGAMSFAAAAMAGLGSANNRGIRGGRDRQGRPLFSSSNEPPKLIFTAGGKQLNRHLTIYQAIQRQLVLDEDDDERFGGSDYVSSDGNRLWGDIYTITYQRADSQTDRASTGGSSSNVSKSAKSGSVSNSSTEPKLHQASVLDSILQGELPCELEKSNPTYNILALLRVLEGLNQLAPRLRAQVITESFAEGKLSNLDELGVTTGARVTSEEFISSKLTPKLARQIQDALALCSGSLPSWCYQLTKACPFLFPFETRRQYFYSTAFGLSRALYRLQQQQGADGHGSANEREVRVGRLQRQKVRVSRNRILDSAAKVMEMYSSQKAVLEVEYFGEVGTGLGPTLEFYTLLSHDLQKVGLQMWRSDSSEKYQMEIDGDEKKMKSSEGSLAGDGELVQAPLGLFPQPWPSNADATEGSQFSKAIEYFRLLGRVVAKALQDGRLLDLPLSVAFYKLILGQELDLHDILFIDAELGKTLQELNALVCRKYYLESTGGSYTDVNSNLHFRGAPVEDLCLDFTLPGYPEYILKSGDEIVDINNLEEYISLVVDATVKTGITRQMEAFKAGFNQVFDISSLQIFTPQELDYLLCGRREMWKADTLVDHIKFDHGYTAKSPAIVNLLEIMGEFTPEQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKLSSTAANASSNGNGPSESADDDLPSVMTCANYLKLPPYSTKEVMSKKLLYAINEGQGSFDLS 1912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00793 1912 MobiDBLite consensus disorder prediction 1 133 - -
Arst3g00793 1912 SMART arm_5 232 273 IPR000225 GO:0005515
Arst3g00793 1912 SMART arm_5 358 396 IPR000225 GO:0005515
Arst3g00793 1912 SMART arm_5 315 355 IPR000225 GO:0005515
Arst3g00793 1912 MobiDBLite consensus disorder prediction 676 736 - -
Arst3g00793 1912 MobiDBLite consensus disorder prediction 10 71 - -
Arst3g00793 1912 MobiDBLite consensus disorder prediction 1147 1188 - -
Arst3g00793 1912 MobiDBLite consensus disorder prediction 1092 1126 - -
Arst3g00793 1912 FunFam Putative E3 ubiquitin-protein ligase HECTD1 1781 1911 - -
Arst3g00793 1912 MobiDBLite consensus disorder prediction 1209 1233 - -
Arst3g00793 1912 FunFam E3 ubiquitin-protein ligase UPL3 1432 1673 - -
Arst3g00793 1912 MobiDBLite consensus disorder prediction 78 92 - -
Arst3g00793 1912 Pfam HECT-domain (ubiquitin-transferase) 1539 1912 IPR000569 GO:0004842
Arst3g00793 1912 FunFam HECT ubiquitin protein ligase family protein KAK 194 508 - -
Arst3g00793 1912 PANTHER E3 UBIQUITIN-PROTEIN LIGASE TRIP12 10 1912 IPR045322 GO:0006511|GO:0061630
Arst3g00793 1912 PANTHER E3 UBIQUITIN-PROTEIN LIGASE TRIP12 10 1912 IPR045322 GO:0006511|GO:0061630
Arst3g00793 1912 CDD HECTc 1491 1907 IPR000569 GO:0004842
Arst3g00793 1912 Gene3D Hect, E3 ligase catalytic domain 1783 1910 - -
Arst3g00793 1912 SUPERFAMILY Hect, E3 ligase catalytic domain 1484 1905 IPR035983 GO:0004842
Arst3g00793 1912 ProSiteProfiles HECT domain profile. 1612 1912 IPR000569 GO:0004842
Arst3g00793 1912 SMART hect_3 1502 1912 IPR000569 GO:0004842
Arst3g00793 1912 Gene3D Hect, E3 ligase catalytic domains 1431 1674 - -
Arst3g00793 1912 MobiDBLite consensus disorder prediction 1294 1326 - -
Arst3g00793 1912 SUPERFAMILY ARM repeat 201 669 IPR016024 -
Arst3g00793 1912 MobiDBLite consensus disorder prediction 103 133 - -
Arst3g00793 1912 MobiDBLite consensus disorder prediction 983 1133 - -
Arst3g00793 1912 MobiDBLite consensus disorder prediction 704 724 - -
Arst3g00793 1912 MobiDBLite consensus disorder prediction 1066 1091 - -
Arst3g00793 1912 Gene3D - 208 679 IPR011989 -
Arst3g00793 1912 MobiDBLite consensus disorder prediction 1155 1188 - -
Arst3g00793 1912 MobiDBLite consensus disorder prediction 983 1034 - -
Arst3g00793 1912 MobiDBLite consensus disorder prediction 676 692 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00793 Arst-Chr3 5657150 5666434 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00793 K10590 - gmx:100783336 2989.52