Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00792 ATGTTTAGTCTCAAAGTGTTTTTAGTTACCTTTGTCTCCTTAATCGTTTCCTCACTGGCCAAAAGTAACTTGAGCGAAGTTACTTACGATGGAAGATCACTCTTTATCAATGGAAAACGAGAGCTTTTTTACTCCGGTTCCATTCATTATACACGAAGCACTCCCGAGATGTGGCCGGACCTTCTTGATAAGGCGAAACGTGGAGGTATAAACGTGATTCAAACTTACATATTTTGGAATGCTCATGAGCCTGAGAAAGGCCAGTTCAAATTTGATCCTACTAACTATGATGTGGTGAGGTTTCTTAAGCTCATTCAAGACAGAGGAATGTATGTTACACTCAGGGTTGGACCTTTCATTCAAGCCGAATGGAATCACGGTGGACTTCCATATTGGCTAAGAGAAGTACCTAACATCATATTCCGATCTAACAATGATCCCTTTAAGAAATATATGCAAGAATATGTAACATCTGTGATAGTAAAGATGAAAGAAGAGAAGCTCTTTGCTTCCCAAGGAGGCCCCATAATATTGTCACAGATTGAGAATGAGTACAACCACATTCAACTTGCTTATGATGAGGAGGGTGATAACTATGTCCAATGGGCTGCAAGAATGGCCGTTGGATTGGATACTGGAGTTCCGTGGATCATGTGCAAGCAAAGGGATGCTCCTGATCCAGTGATCAATGCATGCAATGGAAGGCATTGTGGTGATACCTTCTCAGGACCAAACAAACCATACAAGCCACAAATCTGGACTGAAAACTGGACTGCTCAGTACAGAGTTTTTGGAGATCCACCATCACAAAGATCTGCAGAAGACATTGCCTTCTCAATTGTGCGCTTCTTCTCCAAGAATGGGTCCTTGGTCAACTACTATATGTACCATGGTGGAACAAATTTTGGTAGAACAAGTTCTGCATTTTCGACAACTCGATACTACGATGAAGCTCCTCTTGACGAGTATGGTCTACAAAGAGATCCAAAATGGGGTCACCTCAGGGATGGTCATAGGGCTATCAATCTCTGTAAAAAGGTTCTCCTCTTTGGTACTTCTTCTGTCACCAAGCTAACCGAATTTAATGAGGTTATAACGTTTGAGAAGGGTGATGGATGTGTTGCTTTTCTTACAAACAACCACACCAAAGTGGATACAACTATAAACTTCAAAGGAACAGACTACTTTTTGCCACCACGTTCCATAAGCATCCTTGGTGATTGCAAGAATGTCATCTACAACACTCAACTTATTGCTTCACAACATAATTCAAGAAACTTCAAGAGGTCAAAGCTAGCAAACAATCATAAGTGGGAGATGTATGTTGAGGAGATTCCAACTACTTTGCAATTGAAACCAGATAAGAATGCACCTGCAGAGCTTTATAGCATGCTTAAGGACATGACTGATTATGCATGGTTCACCACAAGTGTTGAATTGGGACCAGAAGACTTCCCAAAGAAGGATGGAACATCCCCGGTTATTCGAATTCTGAGTCTCGGACATTCATTGTGTGCTTATGTAAATGGAGAATACATTGGATCTGGCCATGGATCACATGAAGAGAAGGCTTTTGAGTTCCAAAAACCAGTGAAGTTCAGGATTGGAACTAACCATATATCTATCTTGGGTAGCACAGTGGGACTCCCAGACAGTGGAGCATACATGGAACACCGGTATGCTGGACCAAAGTCTATTACTATCCTTGGTCTGAACACTGGAACAATTGATGTTACTCACAATGGTTGGGGTCATCAGGTTGGTCTTCAAGGTGAGAAGCTTGAAATTTTCACTGAGGCAGGATCAAAGAAGGTACAATGGAGTCCGGCAACGGGGCCAGCACCAGGTCTAAGGTGGTACAAGACACATTTTACAACTCCTGAAGGAAGAGATCCTGTTGCCATAAGGATGACTGGCATGGGGAAAGGAATGGTTTTTATCAATGGCAACAACATTGGTCGTTACTGGATGAGCTACCTCTCGCCTCTGGGAAAGCCTACTCAGGCCGATTACCACATCCCAAGATCTTTCCTGAATCCACGTGACAACCTGCTTGTTGTGTTGGAGGAGGAGCCAGGGTCCCCAGATCAGGTTGTGATCAATACTGTGGACAGGAACACAATCTGCAGTTTCATCACTGAAAATCATCCACCAAATGTGAACTCATGGGAGGTCAAGGGCCAGAAACTGAAGCCTATTGATGATACTCCTCCTGAAGCAGGAGCCACACTCATCTGTCCAGACCGAAACAAGATCACGGCCGTCGAGTTTGCAAGCTTCGGCGACCCTTCAGGCGTCTGTGGAGAATATGTTTTGGGAAAGTGCAATGCACCTAACTCCAAGCAGATTATTGAGCAGGAATGCTTGGGAAAAGATTCATGTTTTGTTCCACTGTCAAAATTCAACAACGCAGTTGATTGCAAAGGTGTGATTAAGACACTTGCCGTCCAAGTTAACTGTGGCTCACCTTCAGCTGCCATGAGATGA 2487 0.4343 MFSLKVFLVTFVSLIVSSLAKSNLSEVTYDGRSLFINGKRELFYSGSIHYTRSTPEMWPDLLDKAKRGGINVIQTYIFWNAHEPEKGQFKFDPTNYDVVRFLKLIQDRGMYVTLRVGPFIQAEWNHGGLPYWLREVPNIIFRSNNDPFKKYMQEYVTSVIVKMKEEKLFASQGGPIILSQIENEYNHIQLAYDEEGDNYVQWAARMAVGLDTGVPWIMCKQRDAPDPVINACNGRHCGDTFSGPNKPYKPQIWTENWTAQYRVFGDPPSQRSAEDIAFSIVRFFSKNGSLVNYYMYHGGTNFGRTSSAFSTTRYYDEAPLDEYGLQRDPKWGHLRDGHRAINLCKKVLLFGTSSVTKLTEFNEVITFEKGDGCVAFLTNNHTKVDTTINFKGTDYFLPPRSISILGDCKNVIYNTQLIASQHNSRNFKRSKLANNHKWEMYVEEIPTTLQLKPDKNAPAELYSMLKDMTDYAWFTTSVELGPEDFPKKDGTSPVIRILSLGHSLCAYVNGEYIGSGHGSHEEKAFEFQKPVKFRIGTNHISILGSTVGLPDSGAYMEHRYAGPKSITILGLNTGTIDVTHNGWGHQVGLQGEKLEIFTEAGSKKVQWSPATGPAPGLRWYKTHFTTPEGRDPVAIRMTGMGKGMVFINGNNIGRYWMSYLSPLGKPTQADYHIPRSFLNPRDNLLVVLEEEPGSPDQVVINTVDRNTICSFITENHPPNVNSWEVKGQKLKPIDDTPPEAGATLICPDRNKITAVEFASFGDPSGVCGEYVLGKCNAPNSKQIIEQECLGKDSCFVPLSKFNNAVDCKGVIKTLAVQVNCGSPSAAMR 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00792 828 Pfam Beta-sandwich domain in beta galactosidase 348 416 IPR041392 -
Arst3g00792 828 Pfam Beta-galactosidase jelly roll domain 605 688 IPR025300 -
Arst3g00792 828 Gene3D - 738 825 IPR043159 -
Arst3g00792 828 CDD Gal_Rha_Lectin_BGal 732 820 - -
Arst3g00792 828 SUPERFAMILY Galactose-binding domain-like 402 563 IPR008979 -
Arst3g00792 828 Gene3D - 585 715 - -
Arst3g00792 828 PANTHER BETA-GALACTOSIDASE RELATED 19 731 IPR001944 GO:0004553|GO:0005975
Arst3g00792 828 Gene3D Glycosidases 24 344 - -
Arst3g00792 828 ProSiteProfiles SUEL-type lectin domain profile. 736 821 IPR000922 GO:0030246
Arst3g00792 828 Pfam Glycosyl hydrolases family 35 33 340 IPR031330 -
Arst3g00792 828 SUPERFAMILY (Trans)glycosidases 26 344 IPR017853 -
Arst3g00792 828 FunFam Beta-galactosidase 23 344 - -
Arst3g00792 828 Pfam Galactose binding lectin domain 745 820 IPR000922 GO:0030246
Arst3g00792 828 SUPERFAMILY Galactose-binding domain-like 580 724 IPR008979 -
Arst3g00792 828 PRINTS Glycosyl hydrolase family 35 signature 171 186 IPR001944 GO:0004553|GO:0005975
Arst3g00792 828 PRINTS Glycosyl hydrolase family 35 signature 252 267 IPR001944 GO:0004553|GO:0005975
Arst3g00792 828 PRINTS Glycosyl hydrolase family 35 signature 308 324 IPR001944 GO:0004553|GO:0005975
Arst3g00792 828 PRINTS Glycosyl hydrolase family 35 signature 615 629 IPR001944 GO:0004553|GO:0005975
Arst3g00792 828 PRINTS Glycosyl hydrolase family 35 signature 114 133 IPR001944 GO:0004553|GO:0005975
Arst3g00792 828 PRINTS Glycosyl hydrolase family 35 signature 289 304 IPR001944 GO:0004553|GO:0005975
Arst3g00792 828 PRINTS Glycosyl hydrolase family 35 signature 642 658 IPR001944 GO:0004553|GO:0005975
Arst3g00792 828 PRINTS Glycosyl hydrolase family 35 signature 58 76 IPR001944 GO:0004553|GO:0005975
Arst3g00792 828 PRINTS Glycosyl hydrolase family 35 signature 37 54 IPR001944 GO:0004553|GO:0005975
Arst3g00792 828 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 173 185 IPR019801 GO:0004553|GO:0005975
Arst3g00792 828 FunFam Beta-galactosidase 585 709 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00792 Arst-Chr3 5651182 5655759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00792 26 821 Glycoside Hydrolase AT2G16730 58.137 0.0 1008
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00792 - - gmx:102663614 1249.96