Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00779 ATGGAACTCAACCTCTGCGTGAACTACCATAACCGTCACGCTTTCAGATTCACCTCTCCTTCCGCTTTCTCTCTCTCCACTCTCCGTTCCGTCCGCACTCACTTCCTCGGTTCCGCCCACACTCTCCGTCCTCCACTACCACCTCTTCAATCTCGCAAGAAATGCAACAGGTTAGGGCTTCTCCGCCTCCACTCACCGCGCTTCGTCTTCAAGGCTTCTTTGCAATCTCACTCTCTCATCGTCGTTGTCGTCCTCGTCACCTTATCCGCCGTTTCTATCCTCCGATTCACTCTCAATAACCGAAAGAAGTCTCGCAATCAGACACGTGGACATGCAAAATTTGCATTATCGCGACAAGGAAGCAATGTGGGGAACCAGGTCATTGAAAGCCAGATTCTCGGTTTTCCAGAATTTCAAAGGGATAACCCGTTGAGTGAAATTGGAAATCTAACAGATCACAATGCAGAAGATAACCATATTCTCGAGGACAAAGAGTCTCAGCTTCCGTTATTGAAATCTTCATTGGTTCACGAAGCATCCTTCATGACCAACATATCAGATTCATCTACTCCTGTTCTTGACTCCAGTTTCAATAATAGTAGTTCGAGAGTTTTAGAAGAGTCTATTTTGCCAGATGCTTTCCAATCAACTGTGTTGCAACCTCTAGCTTTTGCTGAAGAAATGGCTTTACAAGTAGAAGAAAATCAAGATCAAGCTGACTCTGATCCTGAGTCACCTTTGACTATAGTTAAATCTGAGCATGCCACTTCTTCTGTTGGTGTAAACAATGAACTCACAACAATCGATGAACAAACTAAAGAAAACATTGATGCCATCAGCTTTGATGTCCTTTTCGGTGAATCAGCGAGGCAAGAGCTGTACATGTTTTATGAGGATAACAAGTCTACAGTTGGGTCCATGACACCACTTAGTAGTCTAAAGTCGTTATCTCTTCATGCTTCAACTAATAATGTTAAAGGATTGCCCTCAACAATGAGAAATACCACACTAAAAGGATCTGATATCTCAACAGAATTTTCTCCACAAGGTGCAGAATATATTGAAGGAGTGGTACCAATTTCCAGTCACACAGAAGGCTACACTCCACAAAATGGAAGTAAACACTCGAGGAAAGGTGGCAGAGCTCTGCCTGCCAAAGTTTTTCCCAACAATGGCCACTCAATCAACATGCAATTTGATCAGAAAAGTGATCAAACAAGGGTGGAGGATGATCAGAAGAATGACCATTCAGATTATCTGAGCAGATATAATAAGCTGTTAAAAGCTGCGAGGTTACATGAAAGTTTAGAATTGCTTAAAGATATGGAAACAAAGGGTTTATTAGATATGACCAAGATTTATCATGCAAAGTTTTTTAACGTCTGCAAGAGGAAAAGGGCAGTTAAAGAAGCTTTTGATTACATTAGGCTAATTCCAAATCCAACTTTGAGTACATTTAACATGCTTATGTCAGTGTGTACAAGCTCCCAAGATTCAGAAAGGGCTTTCGAAGTGTTGAAGCTACTGAAAGAGGCTCGACTAGAACCTGATTGCAAACTTTATACCACTCTGATTTCCACTTGTGCTAAGAGTGGAAAAGTTGATACAATGTTTGAAATGTTTCACAAGATGGTTAATTCTGGAGTGGAACCCAATGTTCATACCTATGGGGCACTCATTGATGGTTGTGCTAGAGCTGGGCAAATAGCAAAAGCATTTGGTGCTTATGGAATATTGAGGTCCAAGAATGTGAAGCCAGATCGTGTTGTATTCAATGCACTTATAGCTGCATGTGCTCAGTCAGGAGCGGTGGATCGTGCTTTTGATGTTTTAGCAGAAATGGCAGCTGAAATACAACCCATTGACCCAGATCACATAACTATTGGTGCATTGATGAAGGCTTGTGCAAATGCTGGTCAGGTTGAACGGGCACTAGAAGTGTATAAGATGTTACAAAAATATAATTTAAAGGGAACTCCAGAAGTTTACACGATTGCCATTAATTCTTGCAGCCAAACTGGAGATTGGGAATTTGCATGTAGTGTTTACAATGACATGACCCAGAAAGGGGTTCTCCCTGATGAGATGTTTCTGAGTGCACTGATAGATGTTGCTGGACATGCGAAAAAGCTGGATGCTGCCTTTGATGTCCTCAAAGAAGCTCGTAAAGGAGGAATACATATTGGAATGATGTCATATAGCTCGCTAATGGGTGCCTGTAGCAATGCAAGAAATTGGGAAAAGGCATTGGAGCTATATGAATATCTCAAGGCACATAAATTGGTGCGAACAGTTTCAACAGTTAATGCTTTGCTCACTGCGCTTTGTGATGGAAATCAATTTCAGAGGGCTTTGGAAGTTTTATCTGAAATGAAAGGATTGGGATTGTGCCCAAACAGTATCACATTCTCAGTACTGTTAACAGCAAGCGAGAAAAACGATGATATGGAAGCAGCTCAAATGCTTCTTTCTCAAGCCAAAATGGAGGGTGTTGCCCTTAATGTCAACATGTGTCGATGCATAATTGGAATGTGCCTGCAAAGATATGAGAGGGATTGCTTTGTTGGTGAACCTGTTTTATCTTTCAACTCAGGACGGGCCCAAGTCAATAATAAATGGACATCACTGGCTTTAGCAGTGTATCGTGAAACACTTGGAGCTGGTGAAAAACCTACAAGTGAAATACTGTCGCGACTTCTGGGATGCTTACAACTCCCTTATGATGCATCTGTCAAGAATAGACTAGTTGACAACCTGGGAGTAAGCACTGAATCTTCAAGAAACTCAAACCTTCGCGCATTAGTAGATGGTTTTGGGGAATATGATGTTCGTGCTTTTTCAATACTAGAGGAAGCTGCTTCATATGGAGTTGTTTCATCAGTATCATTCAAAGTGAGTCCTATTGTTGTTGATGCTAAGGACATGCATACGTCTACTGCTGAGGTTTATCTCTTAACTGTTTTGAAAGGTCTCAAGCATCGACTGGCAGCAGGTGCAAGATTATCCAATATAATAATTTTACTGCCGGTAGAGAAAACAAAAGTTTCAACTCAAAAGGGGGAAAAGATGATCAACTTGGCTAACAGAGTTGGCCAGGCAGTTGCAGCTTTATTCAGGAGACTTAAAATTCCTTACCAGGGTCACGAATCGAGTGGGAAGCTTAGAATTAATGGTCTAGCTCTGAAGAAATGGTTTCAGCCGAAACTTGCATCATTCAGTGGGAAACCAGGTGACTGGAGCTCATCCCCATCAAGACTGGGCAAACGCATTAGCCATCAGCAGCGAAGGATTCGAACCGGCAATTTATCTTTGGACTAA 3318 0.4183 MELNLCVNYHNRHAFRFTSPSAFSLSTLRSVRTHFLGSAHTLRPPLPPLQSRKKCNRLGLLRLHSPRFVFKASLQSHSLIVVVVLVTLSAVSILRFTLNNRKKSRNQTRGHAKFALSRQGSNVGNQVIESQILGFPEFQRDNPLSEIGNLTDHNAEDNHILEDKESQLPLLKSSLVHEASFMTNISDSSTPVLDSSFNNSSSRVLEESILPDAFQSTVLQPLAFAEEMALQVEENQDQADSDPESPLTIVKSEHATSSVGVNNELTTIDEQTKENIDAISFDVLFGESARQELYMFYEDNKSTVGSMTPLSSLKSLSLHASTNNVKGLPSTMRNTTLKGSDISTEFSPQGAEYIEGVVPISSHTEGYTPQNGSKHSRKGGRALPAKVFPNNGHSINMQFDQKSDQTRVEDDQKNDHSDYLSRYNKLLKAARLHESLELLKDMETKGLLDMTKIYHAKFFNVCKRKRAVKEAFDYIRLIPNPTLSTFNMLMSVCTSSQDSERAFEVLKLLKEARLEPDCKLYTTLISTCAKSGKVDTMFEMFHKMVNSGVEPNVHTYGALIDGCARAGQIAKAFGAYGILRSKNVKPDRVVFNALIAACAQSGAVDRAFDVLAEMAAEIQPIDPDHITIGALMKACANAGQVERALEVYKMLQKYNLKGTPEVYTIAINSCSQTGDWEFACSVYNDMTQKGVLPDEMFLSALIDVAGHAKKLDAAFDVLKEARKGGIHIGMMSYSSLMGACSNARNWEKALELYEYLKAHKLVRTVSTVNALLTALCDGNQFQRALEVLSEMKGLGLCPNSITFSVLLTASEKNDDMEAAQMLLSQAKMEGVALNVNMCRCIIGMCLQRYERDCFVGEPVLSFNSGRAQVNNKWTSLALAVYRETLGAGEKPTSEILSRLLGCLQLPYDASVKNRLVDNLGVSTESSRNSNLRALVDGFGEYDVRAFSILEEAASYGVVSSVSFKVSPIVVDAKDMHTSTAEVYLLTVLKGLKHRLAAGARLSNIIILLPVEKTKVSTQKGEKMINLANRVGQAVAALFRRLKIPYQGHESSGKLRINGLALKKWFQPKLASFSGKPGDWSSSPSRLGKRISHQQRRIRTGNLSLD 1105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00779 1105 Coils Coil 809 829 - -
Arst3g00779 1105 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 729 763 IPR002885 -
Arst3g00779 1105 NCBIfam pentatricopeptide repeat 554 587 IPR002885 -
Arst3g00779 1105 NCBIfam pentatricopeptide repeat 627 657 IPR002885 -
Arst3g00779 1105 NCBIfam pentatricopeptide repeat 485 518 IPR002885 -
Arst3g00779 1105 NCBIfam pentatricopeptide repeat 767 799 IPR002885 -
Arst3g00779 1105 NCBIfam pentatricopeptide repeat 520 553 IPR002885 -
Arst3g00779 1105 NCBIfam pentatricopeptide repeat 732 763 IPR002885 -
Arst3g00779 1105 NCBIfam pentatricopeptide repeat 662 695 IPR002885 -
Arst3g00779 1105 Gene3D Tetratricopeptide repeat domain 456 619 IPR011990 GO:0005515
Arst3g00779 1105 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 624 658 IPR002885 -
Arst3g00779 1105 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 764 798 IPR002885 -
Arst3g00779 1105 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 587 617 IPR002885 -
Arst3g00779 1105 FunFam Pentatricopeptide repeat-containing protein MRL1 chloroplastic 709 856 - -
Arst3g00779 1105 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 552 586 IPR002885 -
Arst3g00779 1105 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 659 693 IPR002885 -
Arst3g00779 1105 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 517 551 IPR002885 -
Arst3g00779 1105 Gene3D Tetratricopeptide repeat domain 706 934 IPR011990 GO:0005515
Arst3g00779 1105 MobiDBLite consensus disorder prediction 1072 1093 - -
Arst3g00779 1105 FunFam Pentatricopeptide repeat-containing protein MRL1, chloroplastic 431 562 - -
Arst3g00779 1105 Gene3D Tetratricopeptide repeat domain 620 691 IPR011990 GO:0005515
Arst3g00779 1105 FunFam Pentatricopeptide repeat-containing protein MRL1, chloroplastic isoform X1 617 708 - -
Arst3g00779 1105 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 482 516 IPR002885 -
Arst3g00779 1105 Pfam Pentacotripeptide-repeat region of PRORP 632 805 IPR033443 -
Arst3g00779 1105 Pfam Pentacotripeptide-repeat region of PRORP 485 623 IPR033443 -
Arst3g00779 1105 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN MRL1, CHLOROPLASTIC 24 1104 - -
Arst3g00779 1105 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN MRL1, CHLOROPLASTIC 24 1104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00779 Arst-Chr3 5552550 5560758 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00779 430 848 Glycosyltransferase AT1G05670 24.766 3.99e-28 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00779 - - gmx:100814164 1531.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g00779 3 5552550 5560758 Arst3g00779 3 5552550 5560758 ECH