Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00727 ATGCCGGCCTTGGCTTGCTGCGTGGACGCTGCACCTGCTCCTCCCGGCTACGCTCTCGCCGGGGACATATCTCTTCCTCCGCCGGTCACATTCACCGGCGCACTTCCGCTGGCGACAACAACCGACGACGCTGACACCAACACCTCCCATTGGACGCCGTCCATGTCATCCACCCTGTACAGGATCGACGGCTGGGGCGCTCCCTACTTCGCCGTCAACACCGCCGGAAACATCTCCGTCATGCCGCACGGCCTCGGAACCCTTCCCCACCAGGAGATCGATCTGTTGAAGATCGTGAAGAAAGCCTCCGATCCCAAACACTTCGGGGGCCTCGGCCTCCAGCTGCCGCTCATCGTCCGCTTCCCTGACGTACTCAAGAACCGCCTCGAGTCTCTTCAATCGGCGTTCCAGTTTGCGATCCAGGAACAGGGGTACGATGGTCATTACCAAGGTGTATACCCCGTGAAGTGCAACCAGGACAGGTTCGTTGTTGAGGACATAGTTAAATTCGGTTCACCGTTCCGGTTCGGGCTCGAAGCCGGGTCCAAACCGGAGCTTCTTTTAGCCATGTCATGCCTCTGCAAGGGGAATCAAGAAGCGCTTCTTGTTTGCAACGGTTTCAAGGACAGAGAATACATCTCTCTTGCAATTGTTGCGAGGAAGCTTGCTCTCAACACTGTTATTGTTCTTGAGCAAGAGGAAGAGCTCGATTTGGTGGTTGAGATCAGCAAAAAGCTTTGCATTCGACCGGTTATTGGTCTTCGTGCCAAGCTTAGAACCAAGCATTCTGGTCATTTCGGTTCTACTTCTGGCGAGAAAGGGAAATTTGGACTCAACACTACTCAGGTTCTTCGTGTTGTGAAGAAGCTTGAGAATTTGGGCATGCTGGATTGCCTTCAGCTTCTGCATTTCCACATTGGTTCTCAGATTCCAACCACTGCGTTGCTTGCTGATGGTGTTGGAGAGGCTGCACAGATTTACTGTGAAATGGTTAGGCTTGGTGCCCAGATGCGTGTCATCGACATTGGTGGTGGTTTGGGAATTGATTATGATGGCACAAAGTCATGTGACTCTGATATCTCTGTTGGGTATAGTTTGGAAGAATATGCGGCCGCAGTGGTTAGCGCGGTTCAGTTTGTTTGTGACAGAAGATCCGTGAAACACCCTGTGATTTGCAGTGAGAGTGGAAGAGCCATTGTGTCTCATCACTCTGTTTTGATCTTTGAAGCCATTGGAGCTAGCTCTTATGGAGCTCCAACATTGTCCACAGTTGGGCTTCAGTACTTGGTTGAGGCGCTTTCCGATGAAGCACGCGCCGATTACCAGAGCCTCTCGGCGGCAACCATGATTGGTGACTATGAAAACTGTGTGCTTTACATGGAACAGTTGAAACAACGCTGTGTTGAGCAGTTCAAGCAGGGTACTTTGGGAATGGAACAGCTTGCTTCTGTGGACGGCTTGTGTGACCTTGTGAGCAGTGCAATTGGTGCGAAGGATCCGGTGCGCACTTACCATGTGAACCTTTCTGTGTTCACCTCCATTCCTGATTTCTGGGGGATTGATCAGATGTTTCCAATTGTACCGGTTCACAGGCTCGACGAGAAGCCGACGGCGAAGGGGATTCTATCGGATTTGACTTGTGACAGTGATGGGAAGATTGACAGGTTCATTGGGGGAGAATCAAGTTTGCCCCTTCATGAATTGGAAGGCAATGATGGTGGCTACTATCTGGGAATGTTCTTGGGTGGGGCTTATGAGGAGGCGCTTGGAGGTCTCCATAACCTCTTTGGTGGCCCGAGCGTTGTTCGGGTGATGCAGAGGGACGGCCCACATGGCTTTGCGGTGACGCGGGCGGTCCCTGGGCCTTCCTCTGGAGACGTCCTCCGAGTGATGCAGCACGAGCCCGAGCTCATGTTCGAGACACTCAAGCACAGGGCGCAAGAGTTTGCAGCAGATGAGAATGGCCATGATGATGATGAAGATGTTGATGAGAAGAGTATGATGAATGCTGCGGCTCTTGCTGCTAGACTCGCTTTCTCATTTGATAACATGCCATATCTGGTTGCATCTTCATCTTGTGCCTTGAATGCAATGGAGAACAATAGCTTCTACTATTGTTCCAGTGATGAGTTCAGCGAAGTTGTGACTGATTCTACTTGTGCTTGA 2166 0.5162 MPALACCVDAAPAPPGYALAGDISLPPPVTFTGALPLATTTDDADTNTSHWTPSMSSTLYRIDGWGAPYFAVNTAGNISVMPHGLGTLPHQEIDLLKIVKKASDPKHFGGLGLQLPLIVRFPDVLKNRLESLQSAFQFAIQEQGYDGHYQGVYPVKCNQDRFVVEDIVKFGSPFRFGLEAGSKPELLLAMSCLCKGNQEALLVCNGFKDREYISLAIVARKLALNTVIVLEQEEELDLVVEISKKLCIRPVIGLRAKLRTKHSGHFGSTSGEKGKFGLNTTQVLRVVKKLENLGMLDCLQLLHFHIGSQIPTTALLADGVGEAAQIYCEMVRLGAQMRVIDIGGGLGIDYDGTKSCDSDISVGYSLEEYAAAVVSAVQFVCDRRSVKHPVICSESGRAIVSHHSVLIFEAIGASSYGAPTLSTVGLQYLVEALSDEARADYQSLSAATMIGDYENCVLYMEQLKQRCVEQFKQGTLGMEQLASVDGLCDLVSSAIGAKDPVRTYHVNLSVFTSIPDFWGIDQMFPIVPVHRLDEKPTAKGILSDLTCDSDGKIDRFIGGESSLPLHELEGNDGGYYLGMFLGGAYEEALGGLHNLFGGPSVVRVMQRDGPHGFAVTRAVPGPSSGDVLRVMQHEPELMFETLKHRAQEFAADENGHDDDEDVDEKSMMNAAALAARLAFSFDNMPYLVASSSCALNAMENNSFYYCSSDEFSEVVTDSTCA 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00727 721 PANTHER ARGININE DECARBOXYLASE 1 688 IPR002985 GO:0006527|GO:0008295|GO:0008792
Arst3g00727 721 PANTHER ARGININE DECARBOXYLASE 1 688 IPR002985 GO:0006527|GO:0008295|GO:0008792
Arst3g00727 721 ProSitePatterns Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 153 171 IPR022653 -
Arst3g00727 721 PRINTS Arginine decarboxylase signature 253 275 IPR002985 GO:0006527|GO:0008295|GO:0008792
Arst3g00727 721 PRINTS Arginine decarboxylase signature 507 528 IPR002985 GO:0006527|GO:0008295|GO:0008792
Arst3g00727 721 PRINTS Arginine decarboxylase signature 381 398 IPR002985 GO:0006527|GO:0008295|GO:0008792
Arst3g00727 721 PRINTS Arginine decarboxylase signature 121 136 IPR002985 GO:0006527|GO:0008295|GO:0008792
Arst3g00727 721 PRINTS Arginine decarboxylase signature 583 604 IPR002985 GO:0006527|GO:0008295|GO:0008792
Arst3g00727 721 PRINTS Arginine decarboxylase signature 145 159 IPR002985 GO:0006527|GO:0008295|GO:0008792
Arst3g00727 721 PRINTS Arginine decarboxylase signature 229 250 IPR002985 GO:0006527|GO:0008295|GO:0008792
Arst3g00727 721 PRINTS Arginine decarboxylase signature 203 218 IPR002985 GO:0006527|GO:0008295|GO:0008792
Arst3g00727 721 PRINTS Arginine decarboxylase signature 532 557 IPR002985 GO:0006527|GO:0008295|GO:0008792
Arst3g00727 721 FunFam Biosynthetic arginine decarboxylase 122 403 - -
Arst3g00727 721 CDD PLPDE_III_ADC 112 604 IPR002985 GO:0006527|GO:0008295|GO:0008792
Arst3g00727 721 ProSitePatterns Orn/DAP/Arg decarboxylases family 2 signature 2. 334 347 IPR022657 -
Arst3g00727 721 PRINTS Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 391 410 IPR000183 GO:0003824
Arst3g00727 721 PRINTS Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 153 171 IPR000183 GO:0003824
Arst3g00727 721 PRINTS Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 177 189 IPR000183 GO:0003824
Arst3g00727 721 PRINTS Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 583 596 IPR000183 GO:0003824
Arst3g00727 721 PRINTS Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 296 309 IPR000183 GO:0003824
Arst3g00727 721 Gene3D Lyase, Ornithine Decarboxylase; Chain A, domain 1 60 606 IPR009006 GO:0003824
Arst3g00727 721 Gene3D - 420 500 - -
Arst3g00727 721 NCBIfam arginine decarboxylase 51 687 IPR002985 GO:0006527|GO:0008295|GO:0008792
Arst3g00727 721 Gene3D Alanine racemase 122 403 IPR029066 -
Arst3g00727 721 Pfam Pyridoxal-dependent decarboxylase, pyridoxal binding domain 146 401 IPR022644 GO:0003824
Arst3g00727 721 SUPERFAMILY Alanine racemase C-terminal domain-like 489 608 IPR009006 GO:0003824
Arst3g00727 721 SUPERFAMILY PLP-binding barrel 121 403 IPR029066 -
Arst3g00727 721 PIRSF ARGDC 38 677 IPR002985 GO:0006527|GO:0008295|GO:0008792
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00727 Arst-Chr3 5160690 5163675 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00727 K01583 - qsa:O6P43_002047 1081.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g00727 3 5160690 5163675 Arst3g00727 3 5160690 5163675 ECH