Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00717 ATGGCCTCAGCATCAGCATCAGCAACTCTTCTCAAGTCATCCCCAGTTCTTGACAAGTCTGAGTGGGTTAAAGGCCAAACACTTCGCCAAACTGCGGTGTCTCTTGCAAGAACCAACTCTGCCACCCCATCACCATCAGCACTCACCATCAGAGCTGGTTCCTATGCCGATGAGCTCGTCAAGACCGCGAAAACTATTGCTTCACCTGGGCGAGGGATTTTGGCCATGGATGAGTCAAATGCAACCTGTGGGAAGCGTTTGGCCTCAATTGGGCTAGAGAACACTGAAGCTAACCGCCAAGCATACCGTACCCTCCTTGTGGCAGCACCAGGCCTTGGTCAGTTCATCTCCGGTGCCATTCTCTTTGAGGAAACTCTCTACCAATCCACCGTTGATGGCAAGAAAATTGTTGATTTACTTAAAGAGCAAAGCATTGTTCCTGGTATCAAAGTCGACAAGGGTTTGGTGCCCTTGGCTGGTTCCAATGATGAGTCATGGTGCCAAGGTTTGGATGGTCTTGCCTCTCGCTCAGCCGCATACTACCAGCAAGGTGCTCGTTTCGCCAAATGGCGCACTGTTGTGAGCATACCCAATGGTCCCTCTGCTTTGGCTGTCAAGGAAGCAGCATGGGGTTTGGCTCGCTATGCAGCCATTTCTCAGGACAATGGCTTGGTCCCAATTGTGGAGCCAGAGATCTTGCTTGATGGTGAACATGGCATTGACAGGACTTTTGAGGTAGCGAAAAAGGTTTGGGCTGAGGTTTTCTTCTACCTTGCTGAGAACAATGTCCAGTTTGAGGGTATCCTCCTTAAGCCTAGCATGGTTACTCCTGGAGCTGAGTCCAAAGACAGGGCCTCTCCTCAAAAAGTTGCTGACTACACACTCAAGCTCCTTCACAGCAGAATTCCCCCGGCCGTCCCCGGAATTATGTTCTTGTCAGGTGGACAATCTGAGGTGGAAGCAACCCTCAACTTGAATGCAATGAACCAATCTCCAAACCCATGGCATGTGTCCTTCTCATATGCCAGAGCCCTCCAAAACACTTGCTTGAAGACATGGGGAGGCCGTCCGGAGAATGTCAAGGCTGCTCAAGATGCCCTCCTTTTCCGTGCCAAGTCCAACTCACTTGCTCAGCTTGGAAAGTACACCGGCGACGGCGAATCTGAGGAAGCCAAGAAAGAGTTGTTTGTGAAGGGCTACTCCTACTAA 1209 0.5079 MASASASATLLKSSPVLDKSEWVKGQTLRQTAVSLARTNSATPSPSALTIRAGSYADELVKTAKTIASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVAAPGLGQFISGAILFEETLYQSTVDGKKIVDLLKEQSIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIDRTFEVAKKVWAEVFFYLAENNVQFEGILLKPSMVTPGAESKDRASPQKVADYTLKLLHSRIPPAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDALLFRAKSNSLAQLGKYTGDGESEEAKKELFVKGYSY 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00717 402 Pfam Fructose-bisphosphate aldolase class-I 58 402 IPR000741 GO:0004332|GO:0006096
Arst3g00717 402 FunFam Fructose-bisphosphate aldolase 40 401 - -
Arst3g00717 402 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 263 273 IPR029768 -
Arst3g00717 402 SUPERFAMILY Aldolase 49 402 - -
Arst3g00717 402 CDD FBP_aldolase_I_a 56 382 - -
Arst3g00717 402 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 53 402 IPR000741 GO:0004332|GO:0006096
Arst3g00717 402 Gene3D Aldolase class I 39 401 IPR013785 -
Arst3g00717 402 NCBIfam fructose-bisphosphate aldolase class I 58 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00717 Arst-Chr3 5106815 5109557 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00717 55 402 Miscellaneous Gene Families AT3G52930 56.250 8.45e-135 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00717 K01623 - gmx:100818383 724.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g00717 3 5106815 5109557 Arst3g00717 3 5106815 5109557 ECH