Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00585 ATGGAGATCGATTTCAATGAGTATCAGTTGCGCTGTGAACTCCGTGGCCACGAAGACGACGTTCGTGGAATATGCGTTTGCGGCAACGAGCGCATAGCGACGTCGTCGAGGGACAAAACCGTTAGGCTTTGGTCTCAGGACCCTTCTGAGAAACGCAAGTTCGTGTCTTCGAAGATTCTTTTGGGTCACACCAGCTTCGTTGGACCAATTGCATGGATTCCTCCCAACGACGAGTTCACGGAAGGTGGGGTTGTGTCAGGTGGAATGGACACACTCGTTTTTGTTTGGGACTTGAAGAGTGGCGAGAAGGTTCAAACCCTCAAAGGCCATTCTTTGCAGGTCACTAGCATTACATTGGATAATGGGGATATTGTTTCATCTTCTGTTGATTGTACCTTGAGACGGTGGAGAAATGGGCAATCTGTAGAGACATGGGAGGCTCATAAGGCACCTATCCAAGCTGTTATAAAGTTACCTTCAGGCGAGCTTGTTACAGGTTCAAGTGACACAACTTTGAAGCTTTGGAGAGGAAAAACTTGTTTACATACTTTCAATGGACATGCAGATACAGTAAGAGGATTGGCTGTGATGGCTGGCCTTGGGGTCCTATCCTCATCACATGATGGTTCTCTCAGATTATGGGCAGTAAGTGGTCAAGTGTTAATGGAGATGGTTGGCCATACTGCAATTGTTTATTCAGTTGATTCACACGCATCTGGACTTATCGTCAGTGGTAGTGAATGATGCTCAATATCGTCTAATGGAGTTTGTGTTCAGAGCATAGAGCATCCTGGTTGTGTTTGGGATGCAAAGTTCATGGAAAATGGGGATATTGTGACAGCGTGTTCGGATGGAGTTGTACGCATTTGGACAGTTCATCCAGATAATATTGCTGACCAGCTTGAGCGTGATTTATACGCTTCTGAACTTTCTCAATACAAGACTAGTAGAAAAAGGGTTGGTGGATTGAAATTGGAAGAGTTACCCGGCTTGGAGGCACTGAAGATCCCAGGTACTAGTGATGGCCAGACAAAAGTAGTCAGAGAGGGGGATAATGGGGTGGCATATGCTTGGAACATGCCAGAACAGAAGTGGGATAAAATTGGTGAAGTTGTTGATGGACCGGAGGAATCAGGTCGCGCTTTCCACGATGGTGTTCAGTATGACTATGTATTTGATGTCGACATTGGAGATGGTATGCCTATCCGCAAGTTGCCATACAATCGATCAGATAATCCCTATGATGTTGCTGACAAATGGCTACTCAAGGAGAACCTTCCTCTTTCCTTCCGTGAACAAATTGTACAGTTCATACTTCAAAATACCGGACAAAAGGATATTACCTTTGATGCTTCATTTCGTGATCCTTACACTGGTGCCAATGCTTATGTACCAGGACAACCTTCACGAACATCTGATGCTTCTGCGAAACCTACTTTCAAGCATATTCCTAAGAAAGGGATGCTTGGTTTTGATACAGCTCAGTTTGATGGGATCCTCAAAAAGATAACTGAATTCAACAGTGCTTTACAATCTGACCAGGAAAAGCAGAACTTGTCTTTGACTGAACTCGATGTTTCCAGACTGGGTGCCATTGTGAAAATTCTGAAAGATACTTCACATTATCATTCTAGTAAATTTGCGGATGCTGATATATCCTTGTTGCTGAACTTGCTTCGGTCATGGCCAATTTCAATGATATTTCCTGTCATTGATCTTGTAAGGATGATAGTTCTTCATCCAGATGGGGCTACTATGCTTCACAAGCATTTTCAAGCTGAAAATGATATATTAATGGAAGTGATTAAAAAAGTCACTTCAAATTCATCAATTCCTGCAAATCTGTTGATCAGCATTCGTACTGTTACTAATCTTTTCAAGAATTCATGCTACTATGGCTGGTTGCAGAAACATCGCAGTGAGGTTCTTGATGCTTTCTCGAGTTGTAGTTCATCTCCTAACAAAAACTTGCAATTGTCCTATTCTACCTTGATACTCAATTATGCTGTTCTGTTAATTGAATCGAAAGATCAAGAAGGTCAATATCAAGTCTTATCAGCAGCACTTGAGATTGCTGAGGAAGAAAATGTAGAAGTTGATTCCAAATTCCGTGCTTTAGTTGCTGTTGGATCACTGATGCTTGAAGGTCTTGTTAAAAAGGCAGCGCTGGACTTCGATGTATTGAGCATTGCAAAAGCAGCAAAGGCTTCTAAGGAAGCCAAGCTTGCTGAAATTGGATCCGACATCGAGCTAGTAGCAAAGCAGAGTTGA 2271 0.428 MEIDFNEYQLRCELRGHEDDVRGICVCGNERIATSSRDKTVRLWSQDPSEKRKFVSSKILLGHTSFVGPIAWIPPNDEFTEGGVVSGGMDTLVFVWDLKSGEKVQTLKGHSLQVTSITLDNGDIVSSSVDCTLRRWRNGQSVETWEAHKAPIQAVIKLPSGELVTGSSDTTLKLWRGKTCLHTFNGHADTVRGLAVMAGLGVLSSSHDGSLRLWAVSGQVLMEMVGHTAIVYSVDSHASGLIVSGSEXCSISSNGVCVQSIEHPGCVWDAKFMENGDIVTACSDGVVRIWTVHPDNIADQLERDLYASELSQYKTSRKRVGGLKLEELPGLEALKIPGTSDGQTKVVREGDNGVAYAWNMPEQKWDKIGEVVDGPEESGRAFHDGVQYDYVFDVDIGDGMPIRKLPYNRSDNPYDVADKWLLKENLPLSFREQIVQFILQNTGQKDITFDASFRDPYTGANAYVPGQPSRTSDASAKPTFKHIPKKGMLGFDTAQFDGILKKITEFNSALQSDQEKQNLSLTELDVSRLGAIVKILKDTSHYHSSKFADADISLLLNLLRSWPISMIFPVIDLVRMIVLHPDGATMLHKHFQAENDILMEVIKKVTSNSSIPANLLISIRTVTNLFKNSCYYGWLQKHRSEVLDAFSSCSSSPNKNLQLSYSTLILNYAVLLIESKDQEGQYQVLSAALEIAEEENVEVDSKFRALVAVGSLMLEGLVKKAALDFDVLSIAKAAKASKEAKLAEIGSDIELVAKQS 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00585 756 Pfam PUL domain 483 748 IPR013535 -
Arst3g00585 756 Gene3D - 4 307 IPR015943 GO:0005515
Arst3g00585 756 Gene3D - 375 450 IPR038122 -
Arst3g00585 756 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 14 45 - -
Arst3g00585 756 FunFam Polyubiquitin binding protein (Doa1/Ufd3) 4 310 - -
Arst3g00585 756 SUPERFAMILY WD40 repeat-like 5 302 IPR036322 GO:0005515
Arst3g00585 756 CDD WD40 10 290 - -
Arst3g00585 756 ProSiteProfiles PUL domain profile. 481 752 IPR013535 -
Arst3g00585 756 FunFam Phospholipase A-2-activating protein isoform A 481 753 - -
Arst3g00585 756 ProSiteProfiles PFU domain profile. 357 452 IPR015155 -
Arst3g00585 756 ProSiteProfiles Trp-Asp (WD) repeats profile. 145 175 IPR001680 GO:0005515
Arst3g00585 756 ProSiteProfiles Trp-Asp (WD) repeats profile. 60 106 IPR001680 GO:0005515
Arst3g00585 756 ProSitePatterns Trp-Asp (WD) repeats signature. 84 98 IPR019775 -
Arst3g00585 756 FunFam Transducin family protein / WD-40 repeat family protein 376 450 - -
Arst3g00585 756 PANTHER PHOSPHOLIPASE A-2-ACTIVATING PROTEIN 6 710 - -
Arst3g00585 756 SMART WD40_4 7 45 IPR001680 GO:0005515
Arst3g00585 756 SMART WD40_4 138 176 IPR001680 GO:0005515
Arst3g00585 756 SMART WD40_4 177 215 IPR001680 GO:0005515
Arst3g00585 756 SMART WD40_4 100 137 IPR001680 GO:0005515
Arst3g00585 756 SMART WD40_4 217 253 IPR001680 GO:0005515
Arst3g00585 756 SMART WD40_4 53 97 IPR001680 GO:0005515
Arst3g00585 756 SMART WD40_4 254 291 IPR001680 GO:0005515
Arst3g00585 756 PRINTS G protein beta WD-40 repeat signature 163 177 IPR020472 -
Arst3g00585 756 PRINTS G protein beta WD-40 repeat signature 32 46 IPR020472 -
Arst3g00585 756 PRINTS G protein beta WD-40 repeat signature 202 216 IPR020472 -
Arst3g00585 756 ProSiteProfiles Trp-Asp (WD) repeats profile. 14 45 IPR001680 GO:0005515
Arst3g00585 756 Gene3D - 481 752 IPR011989 -
Arst3g00585 756 Pfam PFU (PLAA family ubiquitin binding) 337 445 IPR015155 -
Arst3g00585 756 ProSiteProfiles Trp-Asp (WD) repeats profile. 184 214 IPR001680 GO:0005515
Arst3g00585 756 Coils Coil 675 695 - -
Arst3g00585 756 Pfam WD domain, G-beta repeat 140 175 IPR001680 GO:0005515
Arst3g00585 756 Pfam WD domain, G-beta repeat 179 214 IPR001680 GO:0005515
Arst3g00585 756 Pfam WD domain, G-beta repeat 101 136 IPR001680 GO:0005515
Arst3g00585 756 Pfam WD domain, G-beta repeat 256 290 IPR001680 GO:0005515
Arst3g00585 756 Pfam WD domain, G-beta repeat 12 45 IPR001680 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00585 1 755 Acyl Lipid Metabolism Gene Families AT3G18860 71.900 0.0 1174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00585 K14018 - gmx:100816481 1312.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g00585 3 4006540 4014789 Arst3g00585 3 4006540 4014789 ECH