Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00534 ATGAGCAACCACCATAACCAACAAGATCAGCGTAACGGCATTCTCGATTCCACCTTCAATCAAACCCTTAGAACTGTTCAAGGGTTACTTAAAGGTCGTAGCATGCCTGGGAAAATATTATTGAGCCCGAGATCAGACCCAGTAGATGGCTCGAACACGAAGGACTCATCGCCAAGTTACAGGAGGAGCTTCTCACACAATGATGCTGGCACTAGTGACCATACATATGGGGCAGATGAGGAAGAAGTTCAGAGTCCAACTATTATTGCCAATTTGAATCGGTTATCAATCTCGCATGTAGAGAGATCATCCAAAGAATTCTCCAAGTCTACCATTGGTGCCAGATCTACAGATTCTGCAAGAGTTATGAAGTTCACTAAGGTTCTTTCAGGGACAACAGTTATATTAGACAAGTTGCGTGAGCTAGCCTGGAGTGGTGTTCCAGATGACATGCGCCCTACTGTGTGGAGGCTTCTCTTGGGATATGCACCACCTAATTCAGATAGAAGGGAGGGGGTTCTACGAAGAAAGCGCCTTGAGTATCTTGAGTGTATTTCTCAGTATTATGATATTCCTGATACTGATCGTTCCGATGATGAGATCAACATGCGTCGCCAGATTGTTGTTGATTGTCCAAGAACTGTACCTGATGTTCCATTCTTCCAGCAACAGCAAGTTCAGAAATCATTGGAGCGCATTCTTTATGCATGGGCCATTCGACATCCTGCAAGTGGATATGTTCAGGGGATAAATGATCTTGTTACACCATTTTTAGTTGTTTTCCTTTCAGAATACTTAGAAGGGTCTATAGATAATTGGTCAATGTCTGATTTATCCTCAGACCAGATCAACAATGTAGAGGCTGATTGCTATTGGTGCTTGTCGAAGTTGCTTGATGGTATGCAAGATCATTACACATTTGCTCAACCAGGGATTCAGAGGCTTGTTTTTAAGTTGAAGGAATTGGTCAGGAGGATTGATGAACCTGTTTCACGACATGTGGAGGATCAAGGTCTTGAATTTCTTCAGTTTGCTTTCCGCTGGTTCAACTGTCTTCTAATCCGCGAGATACCCTTCCATCTCATCACACGCCTTTGGGACACGTACCTTGCTGAAGGAGATGCTTTACCAGACTTCCTTGTGTATATATTTGCCAGTTTCCTTCTAACATGGTCAGACAATCTCCAGAAGCTAGATTTCCAAGAATTGGTGATATTCCTTCAACATCTTCCAACTCAGAACTGGACTCACCAAGAGCTGGAAATGGTACTTTCCAGGGCATTTATGTGGCACAGCATGTTCAACAACTCTCCCAGCCATTTAGCCAGCTGA 1332 0.4354 MSNHHNQQDQRNGILDSTFNQTLRTVQGLLKGRSMPGKILLSPRSDPVDGSNTKDSSPSYRRSFSHNDAGTSDHTYGADEEEVQSPTIIANLNRLSISHVERSSKEFSKSTIGARSTDSARVMKFTKVLSGTTVILDKLRELAWSGVPDDMRPTVWRLLLGYAPPNSDRREGVLRRKRLEYLECISQYYDIPDTDRSDDEINMRRQIVVDCPRTVPDVPFFQQQQVQKSLERILYAWAIRHPASGYVQGINDLVTPFLVVFLSEYLEGSIDNWSMSDLSSDQINNVEADCYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVRRIDEPVSRHVEDQGLEFLQFAFRWFNCLLIREIPFHLITRLWDTYLAEGDALPDFLVYIFASFLLTWSDNLQKLDFQELVIFLQHLPTQNWTHQELEMVLSRAFMWHSMFNNSPSHLAS 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00534 443 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 182 307 - -
Arst3g00534 443 Pfam Rab-GTPase-TBC domain 149 391 IPR000195 -
Arst3g00534 443 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 103 408 - -
Arst3g00534 443 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 124 333 IPR035969 -
Arst3g00534 443 Gene3D - 123 174 - -
Arst3g00534 443 MobiDBLite consensus disorder prediction 46 72 - -
Arst3g00534 443 MobiDBLite consensus disorder prediction 34 82 - -
Arst3g00534 443 Gene3D - 308 443 - -
Arst3g00534 443 FunFam TBC1 domain family member 120 172 - -
Arst3g00534 443 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 309 431 IPR035969 -
Arst3g00534 443 ProSiteProfiles TBC/rab GAP domain profile. 146 373 IPR000195 -
Arst3g00534 443 SMART tbc_4 143 399 IPR000195 -
Arst3g00534 443 FunFam TBC domain containing protein 308 443 - -
Arst3g00534 443 FunFam TBC1 domain family, member 22B 177 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00534 Arst-Chr3 3743090 3747184 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00534 K20360 - gmx:100819281 749.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01494 8 24071232 24075282 Arst3g00534 3 3743090 3747184 PCT