LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst3g00503	ATGGCTACTTCGTTGTTCCGGAGCATTCGGAGAGCTTCCTCTCTTCTCAGATTCTCGTACTCAACTACCTCCTTTTCGGTTTCTCCCAGGTCAGTTGTGAGGTCCCGGATATCGGTTTTCTTGCCGTTTAGGCAATGCAATTCAGTTGGGAAGCCGAGTTTGTGGTGGGGTTTCAGAGAGTTGAGCTATGGCACTGTGAACTTGGTTATATCGGAAGGGAAGACCAAGTTTGAGGCTCGCGAGGTTGAGCCGCCAAGGAAGGATAAATATAAGACTAAGAAGAAGCTGAAGATGCAGAGGAAGAGGGAGAAGGAGAAGAGGAAAGCTGCAAATAGGAGAGACCCTCGTTGGCTTGGTGTCAAGGGGAAGAAGAAGCAGAAGTTTGCCAATGCAGAAGAGAGAATCAAGTGCAAGCTTGAGAAAGCCAGAATTAAGGAATCAATGCTCATTGAAAGACTCAAAAGATATGATGTTCCTAAAGCTCAGGGTCCTGTTGCCAAACCTGATGGTTTGACGGGGGAGGAACGATTTTATTTGAAGAAGATGGCTCAGAAGAGTTCTAATTACCTACAAGTTGGCCGAAGAGGATTATTTGGAGGGGTTATTCTTAATATGCATATGCATTGGAAGAAACATGAGACTGTTAAGGTCATATGCAAGCCTTGTAAACCTGGCCAAGCACATGAGTATGCACAAGAACTTGCTAGATTGAGTGGTGGTATTCCAATCCACTTCATTGGAGATGACACTATAATATTTTATCGCGGAAAGAACTATGAACAGCCCGAGGTTATGTCACCAATAGATACATTATCCAAGAAAAAGGCACTCGAAAAATCCAAGTATGAGCAATCTCTTGAATCAGTTAGGCGCTTCATCGCTATCGCTGAGAAAGAACTAGAGCTATATTACAGGCACATCGCACTCTACGGCAATCCGAACGACCGTAATCCCTTATCAGTTCTTGATGGCCCAAGTGGAGACTCCATCAGAAAAGGGTACCATAGGATTCATAAACAAAGTAACCCTGAGTTGATTAATGATCTTGCTGATTCCAAAGAAATGGGGCTATCAGAATCTGAAGATAATAACAATGAAGATGAAAACTTGTCAATGGATGAATCAGATTCTGAAGAGCACAGGATGCTATATACTAGTGACGATGATAAAGAAAGTGACGAATGTTTTACTAATTTGAAAGATGCAAGTGCAAGCTCAAGAGCTGGTTCATCACCATCAATGTCTAAACATACCTACCATTATAGTAATTGTAATAATCAATGTTTATTATCCAAAGAAATGCCATGCACTAGAGATTAG	1320	0.4205	MATSLFRSIRRASSLLRFSYSTTSFSVSPRSVVRSRISVFLPFRQCNSVGKPSLWWGFRELSYGTVNLVISEGKTKFEAREVEPPRKDKYKTKKKLKMQRKREKEKRKAANRRDPRWLGVKGKKKQKFANAEERIKCKLEKARIKESMLIERLKRYDVPKAQGPVAKPDGLTGEERFYLKKMAQKSSNYLQVGRRGLFGGVILNMHMHWKKHETVKVICKPCKPGQAHEYAQELARLSGGIPIHFIGDDTIIFYRGKNYEQPEVMSPIDTLSKKKALEKSKYEQSLESVRRFIAIAEKELELYYRHIALYGNPNDRNPLSVLDGPSGDSIRKGYHRIHKQSNPELINDLADSKEMGLSESEDNNNEDENLSMDESDSEEHRMLYTSDDDKESDECFTNLKDASASSRAGSSPSMSKHTYHYSNCNNQCLLSKEMPCTRD	439

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst3g00503	439	SMART	CRS1_YhbY_2	171	255	IPR001890	GO:0003723
	Arst3g00503	439	Coils	Coil	93	113	-	-
	Arst3g00503	439	MobiDBLite	consensus disorder prediction	398	416	-	-
	Arst3g00503	439	SUPERFAMILY	YhbY-like	171	265	IPR035920	-
	Arst3g00503	439	ProSiteProfiles	CRM domain profile.	169	266	IPR001890	GO:0003723
	Arst3g00503	439	MobiDBLite	consensus disorder prediction	90	107	-	-
	Arst3g00503	439	MobiDBLite	consensus disorder prediction	80	123	-	-
	Arst3g00503	439	MobiDBLite	consensus disorder prediction	374	397	-	-
	Arst3g00503	439	PANTHER	GROUP II INTRON SPLICING FACTOR CRS1-LIKE	21	405	IPR040286	-
	Arst3g00503	439	Pfam	CRS1 / YhbY (CRM) domain	171	255	IPR001890	GO:0003723
	Arst3g00503	439	Gene3D	-	171	269	IPR035920	-
	Arst3g00503	439	MobiDBLite	consensus disorder prediction	354	416	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst3g00503	Arst-Chr3	3476238	3479426	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst3g00503	-		-	ahf:112769128	667.537