Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00470 ATGCAGAAGCCGGGGCAGGCCGTTGATTTCGCCCTGAAGGAGACATATCCGAAGATAGGAGCAGGGGCAGTAACAGGTGACAAGCTATCATGCACCTATGATCTTGTTGAACAGATGCAATATTTGTATGTTAGAGTTGTGAAAGCCAAGGATTTGCCTTCAAAGGATGTAACTGGTGGTGTTGATCCCTATGTTGAAGTGAAGCTTGGAAACTACAAGGGAATTACCAAGCATTTTGAAAAGAAGTCCAATCCTGAATGGAACCAGTGCTTTGCATTCTCCAAGGACAGGATTCAAGCCTCAGTCTTGGAGGTTGTTGTCAAAGACAAGGATGTTGTTGTTGATGATTTTGTTGGGAGGGTTTGGTTTGATCTGAATGAGATCCCCAAACGCGTTCCGCCGGATAGTCCTCTGGCTCCACAGTGGTACAGATTGGAGACTAGAAAGGGCGAAAAGGCGAAAGGAGAGTTGATGCTAGCGGTTTGGATGGGGACTCAAGCGGATGAGGCTTTTCCTGATTCATGGCATTCTGATGCAGCAATGGTTGGAACTGAATCTGTTGCAAACATAAGATCAAAGGTTTATCTCTCACCAAAGCTTTGGTATGTTAGAGTGAATGTGATTGAGGCTCAGGACTTGGTACCTAGTGATAAAACCAGGTACCCTGAAGTTTATGTGAAGGCTAATCTAGGACATCAAATACTAAGGACTAGGGTGTCTCAAATTAAGACAATCAATCCAATGTGGAATGAGGATTTGATGTTTGTTGCTGCTGAGCCATTTGAGGAGCCTTTGGTTTTGACAGTGGAAGACAGAGTTGGACCAAACAAAGATGAAACCTTAGGAAGGTGTTTGATTCCTCTGCACCAAGTGCAAAGGAGGCTAGATCACAAGCCTGTGAACACAAGATGGTTCAATCTTGAGAAGCATATTGGTGCTGAAGGGGAGAAAAAGGAGACGAAATTTGCTAGCCGGATTCATTTAAGGGTGTGTTTGGATGGAGGGTACCATGTGTTGGATGAATCAACTCATTATAGTAGTGATCTTAGACCAACTGCCAAACAGCTTTGGAAGCCTAGTATTGGAATTCTTGAAGTTGGGATCATAAGTGCACAAGGGCTAATGCCAATGAAGACAAGAGATGGTAGAGGAACTACTGATGCTTATTGTGTGGCAAAATATGGCCAGAAATGGATCCGAACTCGGACAATTGCAGATAGCTTTGCACCAAAGTGGAATGAGCAATACACTTGGGAGGTTTTTGATCTATCTACTGTTATCACTGTAGGTGTCTTTGATAATGGTCATTTACATGGCGGTGGCGACAAATCCGGTGGATCAAAAGATTCTAGGATAGGGAAGGTGAGGATTAGGCTATCAACTCTTGAATCTGATAGAGTTTATACTCACTCTTACCCTCTTCTAGTGCTGCATAATTCTGGTGTGAAGAAAACTGGTGAAGTTCAATTGGCTGTTAGGTTCACAAGCTCATCTTTCATAAACATGATGTATCTTTATTCCCAGCCTTTGTTGCCAAAGATGCATTACATCCACCCTCTATCTGTGATCCAGCTGGACAATCTGCGGCACCAGGCAACGCAGATTGTGTCGATGAGGCTGAGCCGGGCTGAGCCGGCTCTAAGGAAAGAGGTTGTGGAATACATGCTTGATGTGGATTCACATATGTGGAGCATGAGGAGAAGCAAGGCTAATTTCTTCAGAATAATGAAAGTTCTTGGTGGTTTAATAGCATTTGGGAGATGGTTTGATCAGATATGCAATTGGAAAAACCCCATCACAACAATACTAATCCATATCCTTTTCATAATCTTGGTTCTTTATCCTGAACTAATCCTCCCTACAATCTTCTTGTATCTTTTCTTGATTGGGATTTGGAACTTTCGATGGCGGCCACGACACCCTCCCCATATGGACACAAGGCTCTCACATGCTGATGCTGCTCACCCTGATGAACTTGATGAAGAGTTTGATTCATTTCCAACTTCAAGATCATCAGATATTGTTAAAATGAGGTATGATCGGTTAAGGAGCATTGGAGGGAGAGTGCAAACTGTGGTAGGAGACTTGGCCACACAAGGAGAAAGGTTTCAAAGTTTGTTAAGTTGGAGAGATCCAAGGGCTACAACATTGTTTGTGACATTCTGTCTTGTTGCTGCTGTAGTTCTTTATGTTACTCCTTTTCAGGTTGTGTGCCTTCTCAGTGGATTCTATGTTCTGAGACATCCAAGGTTTCGCCATAAGCTTCCATCAGTTCCAATCAACTTCTTTAGGAGATTGCCAGCAAGATCAGATAGCATGTTGTAA 2325 0.4318 MQKPGQAVDFALKETYPKIGAGAVTGDKLSCTYDLVEQMQYLYVRVVKAKDLPSKDVTGGVDPYVEVKLGNYKGITKHFEKKSNPEWNQCFAFSKDRIQASVLEVVVKDKDVVVDDFVGRVWFDLNEIPKRVPPDSPLAPQWYRLETRKGEKAKGELMLAVWMGTQADEAFPDSWHSDAAMVGTESVANIRSKVYLSPKLWYVRVNVIEAQDLVPSDKTRYPEVYVKANLGHQILRTRVSQIKTINPMWNEDLMFVAAEPFEEPLVLTVEDRVGPNKDETLGRCLIPLHQVQRRLDHKPVNTRWFNLEKHIGAEGEKKETKFASRIHLRVCLDGGYHVLDESTHYSSDLRPTAKQLWKPSIGILEVGIISAQGLMPMKTRDGRGTTDAYCVAKYGQKWIRTRTIADSFAPKWNEQYTWEVFDLSTVITVGVFDNGHLHGGGDKSGGSKDSRIGKVRIRLSTLESDRVYTHSYPLLVLHNSGVKKTGEVQLAVRFTSSSFINMMYLYSQPLLPKMHYIHPLSVIQLDNLRHQATQIVSMRLSRAEPALRKEVVEYMLDVDSHMWSMRRSKANFFRIMKVLGGLIAFGRWFDQICNWKNPITTILIHILFIILVLYPELILPTIFLYLFLIGIWNFRWRPRHPPHMDTRLSHADAAHPDELDEEFDSFPTSRSSDIVKMRYDRLRSIGGRVQTVVGDLATQGERFQSLLSWRDPRATTLFVTFCLVAAVVLYVTPFQVVCLLSGFYVLRHPRFRHKLPSVPINFFRRLPARSDSML 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00470 774 CDD C2B_MCTP_PRT_plant 41 165 IPR047257 -
Arst3g00470 774 ProSiteProfiles C2 domain profile. 23 143 IPR000008 -
Arst3g00470 774 SMART C2_3c 41 137 IPR000008 -
Arst3g00470 774 SMART C2_3c 363 471 IPR000008 -
Arst3g00470 774 SMART C2_3c 202 300 IPR000008 -
Arst3g00470 774 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 362 504 IPR035892 -
Arst3g00470 774 CDD C2D_MCTP_PRT_plant 363 491 IPR047255 -
Arst3g00470 774 ProSiteProfiles C2 domain profile. 181 305 IPR000008 -
Arst3g00470 774 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 353 IPR035892 -
Arst3g00470 774 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 41 178 IPR035892 -
Arst3g00470 774 Gene3D C2 domain 32 164 IPR035892 -
Arst3g00470 774 FunFam C2 domain-containing protein 36 180 - -
Arst3g00470 774 Pfam Plant phosphoribosyltransferase C-terminal 619 774 IPR013583 -
Arst3g00470 774 CDD C2C_MCTP_PRT_plant 202 351 IPR047258 -
Arst3g00470 774 FunFam C2 domain-containing protein 345 498 - -
Arst3g00470 774 FunFam C2 domain-containing protein 188 332 - -
Arst3g00470 774 Gene3D C2 domain 360 498 IPR035892 -
Arst3g00470 774 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 9 774 IPR047259 -
Arst3g00470 774 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 9 774 IPR047259 -
Arst3g00470 774 ProSiteProfiles C2 domain profile. 345 472 IPR000008 -
Arst3g00470 774 Pfam C2 domain 201 307 IPR000008 -
Arst3g00470 774 Pfam C2 domain 362 474 IPR000008 -
Arst3g00470 774 Pfam C2 domain 41 134 IPR000008 -
Arst3g00470 774 Gene3D C2 domain 185 332 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00470 Arst-Chr3 3257966 3261033 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00470 1 774 Lipid Metabolism Gene Families AT3G57880 82.839 0.0 1361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00470 - - gmx:100788273 1394.79