Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00454 ATGCCTGTAACAGCAGCAGCCACCTTACTATTTCTCGCCGCGGTAATTTCCGCCGCGAACTCGTGCCCGCCCTCCGACCGGGAAGCACTATTAGCCTTCAAGGCTGCTCTCCGGGAGCCGTACAACGGCGGAATCTTCAACTCATGGACCGGCACTAACTGCTGCCGGAACTGGCTCGGCGTAGCATGCGACCAGAACTCCGGCAGAGTAGCCGAGATCAACCTCCGTGCCACCACGCTCTACACAACGTTCGAGAAGCCTCATCGACAGGGATACATGGCCGGTCACATCTCCCCGGAGATCTGCAAACTCACTAGCCTCTCCAGCATCGTCATCACCGACTGGCAAGGAATCTCCGGCGACGTTCCTCCCTGCATCACCTCCCTCTCCTTCCTCCGCATCATCGATCTCACTGGAAACCGAATCACCGGAACCCTCCCCTCCAACATCGGAAACCTCCGGCAGCTGACGCATCTTAGCGCCGCCGACAACTCCATCACCGGCGTAATACCGGCATCGATTTCGTCGTTGACCGGATTAACGTACCTTGACCTCCGTAACAACAGAATCTCTGGCCCGATCCCGAACAGTTTGGGCCAACTAAAGTTTCTGAGCCGGGCCTTCCTTAGCGGGAACCAGATTACTGGGCCAATTCCGGCCTCAATTTCTCGAATGTATCGTCTCGTGGATCTGGATCTTTCTCGAAACAGGCTATCTGGGCCCATACCTGAGTCATTGGGCCGAATGCCAGTTCTAGCAACACTAAATTTGAATACAAACAACCTTTCGGGAAAGATTCCATCGGGCCTGTTGGGCTCAGGTATCAGTGATTTGGACTTGAGCCATAACATGCTGGAGGGTTATATACCCGATTCGTTTGGGCCAAAGTCTTATTTTACTTGTTTGGAATTAGGTTACAATAATTTTAGGGGTTCGATCCCTAAATCCATTGCTAAAGCTGCGTTTATTGGGTTTCTTGATTTGAGCTATAATCACTTGTGTGGCCCAATTCCAAAGGGTGGTGTGTTTGATACTCTTGATGAGTCCTCATTCGCCCACAATGATTGTCTCTGTGGGAAGCCACTACTCAAAGCTTGCTAA 1101 0.5204 MPVTAAATLLFLAAVISAANSCPPSDREALLAFKAALREPYNGGIFNSWTGTNCCRNWLGVACDQNSGRVAEINLRATTLYTTFEKPHRQGYMAGHISPEICKLTSLSSIVITDWQGISGDVPPCITSLSFLRIIDLTGNRITGTLPSNIGNLRQLTHLSAADNSITGVIPASISSLTGLTYLDLRNNRISGPIPNSLGQLKFLSRAFLSGNQITGPIPASISRMYRLVDLDLSRNRLSGPIPESLGRMPVLATLNLNTNNLSGKIPSGLLGSGISDLDLSHNMLEGYIPDSFGPKSYFTCLELGYNNFRGSIPKSIAKAAFIGFLDLSYNHLCGPIPKGGVFDTLDESSFAHNDCLCGKPLLKAC 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00454 366 FunFam Nuclear pore complex protein NUP107 24 195 - -
Arst3g00454 366 SUPERFAMILY L domain-like 21 363 - -
Arst3g00454 366 Gene3D Ribonuclease Inhibitor 91 366 IPR032675 -
Arst3g00454 366 Gene3D Ribonuclease Inhibitor 19 90 IPR032675 -
Arst3g00454 366 FunFam Leucine-rich repeat receptor protein kinase EMS1 196 273 - -
Arst3g00454 366 Pfam Leucine rich repeat 132 190 IPR001611 GO:0005515
Arst3g00454 366 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 5 112 - -
Arst3g00454 366 Pfam Leucine rich repeat N-terminal domain 24 64 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00454 Arst-Chr3 3148038 3149455 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00454 93 366 Receptor kinase-like Gene Family AT3G11080 25.938 1.10e-21 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00454 - - gmx:100804365 488.419