Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00452 ATGAAGGAGGAGGCTTCTGTTGTTCTCTTATTGCTTACTTTGTCACTTGTTGTGTGTTGTTGCTATGCACAGACAAAAGAATGCACAAACATTCCAACACAATCACACTCCTTCCGCTATGAACTCTTAACTTCCAAGAATGAAACTTGGAAGAAAGAAGTGATGTCTCATTTCCATTTGACACCAACAGATGATTCAGCATGGGCTGATTTGCTTCCAAGGAGGTTCCTATCACAGAGGGACCAACATGATTGGGCATTCATGTACAGGAAAATCAAGAACCTTGGTGTGTTTAAGGACTCTCCTGAGGCTGCAGGGTTCCTCAAAGAGGTGCCCTTGCAGGATGTGAGGCTGCCCTTGGATTCAATCCATGGCAGGGCACAGAACACCAACTTGGAGTATCTCTTGATGTTGGATGTTGACAGGTTGCTTTGGAGTTTCAGGAAGACAGCTGGTCTTGATACTCCCGGGACACCTTATGGAGGATGGGAAGGTTCCAATGTTGAGCTCAGGGGTCATTTTGTTGGGCATTACTTAAGTGCATCAGCTCTAATGTGGGCGAGCACACAGAATGATAAATTGAAGGATAAAATGTCAGCCGTTGTCGTCGGTCTCTCTGCCTGTCAGCAGAAAATTGGAACTGGATATCTCTCTGCATTTCCATCTGAGTTTTTTGACAGATTTGAAGCTATTCAGCCTGTGTGGGCTCCCTATTACACCATTCACAAGATATTGGCCGGCCTATTGGATCAACATACTTTTGCTGGAAATCCTCAAGCTCTAAAAGTTGTGACATGGATGGTTGATTACTTTTACAACCGAGTGTTGAATGTAATAACAAAGAACACTATAAGTAGGCACTATGAATCACTGAATGAGGAAACTGGGGGAATGAATGATGTCCTTTACAGATTGTTCACGTTAACGGCAGATCCAAAGCATTTAATGTTGGCTCACCTTTTTGACAAGCCATGTTTTTTAGGATTGCTTGCTGTACAGGCTAATGACATAACTAATTTTCATGCTAATACACATATCCCCGTTGTTATTGGAGCTCAAATGCGGCATGAAGTCACTGGCGATCCACTTTATAAGGATATTGGGACATTCTTTATGGACATTATTAACTCTTCTCACAGCTATGCTACTGGAGGAACATCAGTGTCGGAGTTCTGGCATAATCCAAAGAGAATAGCAGACAACTTAAAAACAACAGAAACTGAAGAATCATGCACAACTTACAACATGTTGAAGGTTTCTCGCCACCTATTTAGATGGACCAAGGAGGTTTCTTATGCAGATTATTATGAACGCGCCTTGACGAATGGTGTACTTAGCATTCAAAGGGGAACAGATCCTGGAGTAATGATTTATATGCTTCCCCTAGCCAGAGGGGTTTCCAAGGCCAAAACTGGACATGGCTGGGGAACACAGTTTGATTCTTTCTGGTGCTGCTATGGAACAGGAATTGAGTCATTCTCAAAGCTTGGAGATTCTATCTATTTTGAAGAGCAGGCGAATGAACCTACTCTTTATATCATTCAGTATATATCGAGCTCCTTTAATTGGAAATCAGGGGAAATTGGGATCAATCAAACAGTAGATCCAGTTGTTTCATGGGATCCTTACCTAAGAGTCACATTTACATTTTCTCCTAATGAGAAAACTGGGAGTACGTTGAAATTTCGCATACCATCTTGGACTAGTTTGGATGGTGCCAAAGCAACATTGAACGATGCAACTTTATCTCTACCAAGTCCTGGAAATTTTTTGTCAGTAAGCCGACAGTGGAGTGCAGGTGACAAACTGAAGCTTCAGTTGCCTATTACCATCAGAACAGAGGCCTTAAAAGATGACAGGCCGGAATATGCATCTGTTCAAGCAATTCTTTATGGACCATATCTCCTTGCCGGCCATACAACCGGTGATTGGGACATTAACTCCGGCGGTAAAACAACTTCTGGAGATTGGATTACCCCAGTTTCTGCCAGCTACAATAGTCAACTATTCACTTTGTACCAAGGCTTTGCAAACTCAACTTATGCCTTAACAAACACAAACCAATCATCACTTACAATGGAATCATTACCTACATCTACATCAGACCCTGATTCTGCCATTGACAAAACATTTAGGCTAGTCCCAAAAGATCCTTCCACAAAGTTCTCTACATGGAAGGATCTTATTGGCAAATCCGTGACGATAGAACTATTTAATCCCCCTGGCATGTATGTGATTCACCAAGGACCAAACCAACCTCTTATCATTGATCAATCCAAAAGTGCGGCATCTTCTTCCTTTATCGTGGTACAAGGCTTGGATGGACAAAAGGAAACGGTATCTTTGAAATCTGAAAGCGATGATGGTTGCTTTGTTACCACTGATGGAGGAGTGAAGCTCAGTTGCAGTCGCTCTGGAGATGATTTTAACCAAGCAGCAAGCTTTGTTATAGAAGAAGGTATAAGGAAATATAATCCTATTAGCTTTGTGGCTAAGGGTGCAAAGAGGGATTTTCTCTTGGAGCCATTGTTCACATTCAAAGATTTGCCTTATACTGTTTATTTCAACATTCAAAGTTGA 2580 0.4186 MKEEASVVLLLLTLSLVVCCCYAQTKECTNIPTQSHSFRYELLTSKNETWKKEVMSHFHLTPTDDSAWADLLPRRFLSQRDQHDWAFMYRKIKNLGVFKDSPEAAGFLKEVPLQDVRLPLDSIHGRAQNTNLEYLLMLDVDRLLWSFRKTAGLDTPGTPYGGWEGSNVELRGHFVGHYLSASALMWASTQNDKLKDKMSAVVVGLSACQQKIGTGYLSAFPSEFFDRFEAIQPVWAPYYTIHKILAGLLDQHTFAGNPQALKVVTWMVDYFYNRVLNVITKNTISRHYESLNEETGGMNDVLYRLFTLTADPKHLMLAHLFDKPCFLGLLAVQANDITNFHANTHIPVVIGAQMRHEVTGDPLYKDIGTFFMDIINSSHSYATGGTSVSEFWHNPKRIADNLKTTETEESCTTYNMLKVSRHLFRWTKEVSYADYYERALTNGVLSIQRGTDPGVMIYMLPLARGVSKAKTGHGWGTQFDSFWCCYGTGIESFSKLGDSIYFEEQANEPTLYIIQYISSSFNWKSGEIGINQTVDPVVSWDPYLRVTFTFSPNEKTGSTLKFRIPSWTSLDGAKATLNDATLSLPSPGNFLSVSRQWSAGDKLKLQLPITIRTEALKDDRPEYASVQAILYGPYLLAGHTTGDWDINSGGKTTSGDWITPVSASYNSQLFTLYQGFANSTYALTNTNQSSLTMESLPTSTSDPDSAIDKTFRLVPKDPSTKFSTWKDLIGKSVTIELFNPPGMYVIHQGPNQPLIIDQSKSAASSSFIVVQGLDGQKETVSLKSESDDGCFVTTDGGVKLSCSRSGDDFNQAASFVIEEGIRKYNPISFVAKGAKRDFLLEPLFTFKDLPYTVYFNIQS 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00452 859 Gene3D - 728 845 - -
Arst3g00452 859 PANTHER PROLINE-TRNA LIGASE (DUF1680) 24 857 - -
Arst3g00452 859 SUPERFAMILY AbfB domain 732 819 IPR036195 GO:0046373|GO:0046556
Arst3g00452 859 PANTHER PROLINE-TRNA LIGASE (DUF1680) 24 857 - -
Arst3g00452 859 Pfam Beta-L-arabinofuranosidase, GH127 116 637 IPR012878 -
Arst3g00452 859 SUPERFAMILY Six-hairpin glycosidases 172 448 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00452 Arst-Chr3 3134830 3139949 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00452 K09955 - gmx:100781521 1299.65