Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00399 ATGGCTGAAGCATCAAACATTGGTAGCAAAAGCAGTAGATGGTCCCTTCAAGGGTTGACAGCCCTCGTTACTGGTGGATCCAAAGGAATCGGGTATGCTATTGTGGAAGAGTTGGCAGGGCTAGGGGCCAGGGTACACACTTGTTCTAGGAACGAAGCTCAACTTAATGAGTCCTTACATGAATGGAGTGCAAAAGGATACCATGTCACAGGTTCTGTATGTGACATGGCGTCTCGTCCGCAGAGAGAAGACCTCATTGCTAAAGTCTCTGGTTTGTTTAATGGCAAACTTGACATCCTTGTGAACAATGTTGGAACCAATTTTCAAAAGGAGACCACTGAGGTCACAGAGGAAGACTTCAGATTCCTTGTGAGCACGAATCTTGAATCTGCTTTCCACATAAGCCAGCTTGCATATCCACTCCTCAAATCATCAGAGGCTGCAAGCGTAGTCTTCATATCCTCCATTGCAGGCGTGGTCTCAGTAGACATGAAAGGAACCATATACAGTGCAGCAAAAGGAGCAATCAACCAACTGACAAGGAATTTGGCATGTGAATGGGCAAAACATAACATAAGGACTAATTGCATTGCACCGGGGCCAATCAAAACCAGTCTGGCTGAAAGGGTATTAAACTTAGACGGAGAGGCGAAACTGGTGGATGCTTTTGTTTCGCGAACTCCTCTTGGACGGATGGGAGAGGCAGGGGAGGTGTCTTCCATTGTAGCATTTCTTTGCATGCCTGCGGCTTCTTACATAACTGGACAGACCATTTGCGTTGATGGCGGCTTAACTGTCAACGCTGTCTAA 810 0.4667 MAEASNIGSKSSRWSLQGLTALVTGGSKGIGYAIVEELAGLGARVHTCSRNEAQLNESLHEWSAKGYHVTGSVCDMASRPQREDLIAKVSGLFNGKLDILVNNVGTNFQKETTEVTEEDFRFLVSTNLESAFHISQLAYPLLKSSEAASVVFISSIAGVVSVDMKGTIYSAAKGAINQLTRNLACEWAKHNIRTNCIAPGPIKTSLAERVLNLDGEAKLVDAFVSRTPLGRMGEAGEVSSIVAFLCMPAASYITGQTICVDGGLTVNAV 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00399 269 PRINTS Glucose/ribitol dehydrogenase family signature 95 106 IPR002347 -
Arst3g00399 269 PRINTS Glucose/ribitol dehydrogenase family signature 169 188 IPR002347 -
Arst3g00399 269 PRINTS Glucose/ribitol dehydrogenase family signature 190 207 IPR002347 -
Arst3g00399 269 PRINTS Glucose/ribitol dehydrogenase family signature 142 158 IPR002347 -
Arst3g00399 269 PRINTS Glucose/ribitol dehydrogenase family signature 228 248 IPR002347 -
Arst3g00399 269 PRINTS Glucose/ribitol dehydrogenase family signature 20 37 IPR002347 -
Arst3g00399 269 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 156 184 IPR020904 GO:0016491
Arst3g00399 269 FunFam Short-chain dehydrogenase reductase 5 268 - -
Arst3g00399 269 Pfam Enoyl-(Acyl carrier protein) reductase 27 265 - -
Arst3g00399 269 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 156 IPR002347 -
Arst3g00399 269 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 169 188 IPR002347 -
Arst3g00399 269 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 95 106 IPR002347 -
Arst3g00399 269 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 18 266 IPR036291 -
Arst3g00399 269 Gene3D - 3 268 - -
Arst3g00399 269 PANTHER TROPINONE REDUCTASE 13 268 IPR045000 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00399 Arst-Chr3 2831958 2833096 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00399 13 267 Miscellaneous Gene Families AT2G29290 64.706 1.93e-115 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00399 K08081 - gmx:100780806 400.593