Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00398 ATGCATCAACCTCAAGGTGTACTTGCTCTCCATACTCCATCACTCTCACTATCACTCTCCAAACTCAGAAGAACAACATCACATTCAAATTCGATCACCATGTTGCACGCGCCGCCGACACATCCCAAGTGGTCTCTCCAAGGAATGACAGCCCTTGTCACCGGTGGAACCCGCGGAATCGGGCACGCCATTGTGGAGGAACTGGTTGGGTTTGGCGCAAGAGTGCACACGTGTGCAAGGAACGAAGCTGAGCTCACCAAGTCTCTCATCCAATGGAATGATTCTGGTTTTGATGTTACTGGCTCTGTTTGCGATGTCTCTGTCCCTCATCAGAGGGAGAAGCTGATGGACTGTGTGTGTTCTCAATTCCAAGGGAAACTCAACATCCTTATAAACAATGTAGGGACAAACATTAGGAAACCAATGACAGAACTCACTACTGCAGAGATTTCCAGACTCATGGATACCAATTTAGGGTCCACCTTTCATATATGCCAACTTGCATATCCACTTCTGAAAGCATCTGGAATTGCAAGTGTTGTGTTTGTCTCGTCGGTTTCTGGTTTCGTCTCCCTGAAGTCCATGTCGGTTCAAGGAGCAACAAAAGGAGCAATTAATCAACTTACAAGGAATCTAGCTTGTGAGTGGGCAAAGGACAATATAAGGAGTAATGCAGTTGCACCCTGGTACATCAAAACCTCAATGGTTGAAAAAGTGCTGAGCAACAAGGAGTATGTGGAAGAGGTGTATTCGAGAACCCCACTTGGGCGACTAGGAGACCCAGCAGAAGTGTCTTCTGTTGTTGCTTTTCTGTGTTTACCAGCATCATCATACATCACTGGCCAGATTATTTGTGTTGATGGAGGGATGACCGTAAATGGATTCTACCCAACTCATACATAG 903 0.4618 MHQPQGVLALHTPSLSLSLSKLRRTTSHSNSITMLHAPPTHPKWSLQGMTALVTGGTRGIGHAIVEELVGFGARVHTCARNEAELTKSLIQWNDSGFDVTGSVCDVSVPHQREKLMDCVCSQFQGKLNILINNVGTNIRKPMTELTTAEISRLMDTNLGSTFHICQLAYPLLKASGIASVVFVSSVSGFVSLKSMSVQGATKGAINQLTRNLACEWAKDNIRSNAVAPWYIKTSMVEKVLSNKEYVEEVYSRTPLGRLGDPAEVSSVVAFLCLPASSYITGQIICVDGGMTVNGFYPTHT 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00398 300 PANTHER TROPINONE REDUCTASE 43 294 IPR045000 GO:0016491
Arst3g00398 300 Pfam Enoyl-(Acyl carrier protein) reductase 57 291 - -
Arst3g00398 300 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 47 293 IPR036291 -
Arst3g00398 300 PRINTS Glucose/ribitol dehydrogenase family signature 219 236 IPR002347 -
Arst3g00398 300 PRINTS Glucose/ribitol dehydrogenase family signature 172 188 IPR002347 -
Arst3g00398 300 PRINTS Glucose/ribitol dehydrogenase family signature 125 136 IPR002347 -
Arst3g00398 300 PRINTS Glucose/ribitol dehydrogenase family signature 50 67 IPR002347 -
Arst3g00398 300 PRINTS Glucose/ribitol dehydrogenase family signature 198 217 IPR002347 -
Arst3g00398 300 PRINTS Glucose/ribitol dehydrogenase family signature 254 274 IPR002347 -
Arst3g00398 300 Gene3D - 40 294 - -
Arst3g00398 300 FunFam Short-chain dehydrogenase reductase 34 295 - -
Arst3g00398 300 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 136 IPR002347 -
Arst3g00398 300 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 198 217 IPR002347 -
Arst3g00398 300 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 178 186 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00398 Arst-Chr3 2829591 2831161 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00398 43 299 Miscellaneous Gene Families AT2G29290 63.566 2.61e-119 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00398 K08081 - gmx:100799534 448.358