Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00389 ATGGTTACTTCCATGAACCATCATTTGGTCCCCAAGTACCCGTTTCTTCTTCCCTCTTGCAATGGTCATAATCCTAAGCTTAGATTCCACTCTTGTGGGCAGGTTGGAGCACAGAAGGGGTATGCTTCTTCTGGGGAGGAACCTCAGTCGCGTGTTTCTGACACAAGTACATACCAAGAGGAATTCTCTTGGTCTTCTGTGATTTTTCCGTTTCTATTCCCAGCATTGGGTGGCTTGTTATTCGGTTATGATATTGGTGCCACCTCAGGGGCCACAATCTCACTGCAGTCACCTGAGCTTAGTGGCATAGCTTGGTTCAATCTTTCGGCTATTCAGCTTGGACTTGTGGTCAGTGGTTCCCTCTATGGGGCTCTTCTTGGCTCACTTCTTGCATATGCCGTTGCTGATTTCCTTGGGAGGAAGAGACAACTCATTGTTGCAGCACTGTTATATGTGCTTGGCGGTTCGATCACTGCGTATGCACCAGAGCTCAATGTCCTCTTAGCAGGAAGGCTGCTTTATGGACTTGGTATAGGTTTGGCCATGCACGGTGCTCCTTTGTATATTGCTGAAACATGTCCATCACAAATCCGTGGGACTCTAGTATCATTAAAAGAACTCTTCATTGTCTTGGGGATTCTGCTTGGTTATTTTGTGGGAAGCTTTGAGATTAATGCCGTTGGGGGATGGCGGTTTATGTATGGCTTTAGTGCTCCGATTGCTGTACTAATGGGGCTAGGAATGTTGAGTCTCCCTCCCTCTCCGAGGTGGTTGCTTCTCAGGGCCGTTCAAGGGAAGGGTTCGTTTCAAGATTTGAAGGAAAAGGCAATTCTTTCCCTGAGTAAATTAAGGGGCAGACCACCCGGCGACAAAGAATCTGAGAAGCAAATAGAAGAGAGCCTTGTTTCGTTGAAGTCTGCATATGCAGATCAGGAATCAGAAGGGAGTTTCTTGGAGGTGTTTCAGGGTGCCAATCTGAAAGCTTTCATAATTGGTGGGGGGCTTGTCTTATTTCAACAGATAACTGGCCAACCAAGTGTTCTGTATTATGCAGGCCCAATTCTTCAGAGTGCTGGATTTTCTGCTGCAGCCGATGCTACCAAAGTTTCAGTTGTTATTGGCTTATTCAAGTTGCTAATGACATGGATTGCTGTCTTAAAAGTTGATGATTTGGGGAGAAGGCCTCTTCTGATTGGAGGTGTCACTGGCATTGCCCTTTCTTTAGCTCTTCTTTCTGCTTATTATAAATTTCTTGGAGGGTTCCCACTTATTGCTGTTGCGGCTTTACTTCTTTATGTTGGTAGCTATCAGGTATCATTTGGCCCAATAAGTTGGCTAATGGTATCAGAAGTTTTCCCGTTGCGCACAAGAGGACGGGGGATCAGTCTGGCTGTTCTAACCAACTTTGCTTCAAATGCAGTTGTGACCTTTGCATTCTCTCCTTTAAAGGAGCTTCTAGGAGCAGAAAACCTTTTTCTCCTTTTTGGGGCTATTGCTTTACTGTCACTTATCTTTGTTATATCTTCAGTTCCCGAAACAAAAGGCTTGAGCCTAGAAGATATTGAGTCCAAAATCTTGAAATGA 1584 0.4508 MVTSMNHHLVPKYPFLLPSCNGHNPKLRFHSCGQVGAQKGYASSGEEPQSRVSDTSTYQEEFSWSSVIFPFLFPALGGLLFGYDIGATSGATISLQSPELSGIAWFNLSAIQLGLVVSGSLYGALLGSLLAYAVADFLGRKRQLIVAALLYVLGGSITAYAPELNVLLAGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLVSLKELFIVLGILLGYFVGSFEINAVGGWRFMYGFSAPIAVLMGLGMLSLPPSPRWLLLRAVQGKGSFQDLKEKAILSLSKLRGRPPGDKESEKQIEESLVSLKSAYADQESEGSFLEVFQGANLKAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATKVSVVIGLFKLLMTWIAVLKVDDLGRRPLLIGGVTGIALSLALLSAYYKFLGGFPLIAVAALLLYVGSYQVSFGPISWLMVSEVFPLRTRGRGISLAVLTNFASNAVVTFAFSPLKELLGAENLFLLFGAIALLSLIFVISSVPETKGLSLEDIESKILK 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00389 527 ProSiteProfiles Major facilitator superfamily (MFS) profile. 70 514 IPR020846 GO:0022857
Arst3g00389 527 Gene3D MFS general substrate transporter like domains 61 525 IPR036259 -
Arst3g00389 527 CDD MFS_GLUT10_12_Class3_like 73 521 - -
Arst3g00389 527 FunFam D-xylose-proton symporter-like 3, chloroplastic 63 525 - -
Arst3g00389 527 Pfam Sugar (and other) transporter 73 522 IPR005828 GO:0016020|GO:0022857|GO:0055085
Arst3g00389 527 PANTHER D-XYLOSE-PROTON SYMPORTER-LIKE 2 64 525 - -
Arst3g00389 527 SUPERFAMILY MFS general substrate transporter 60 522 IPR036259 -
Arst3g00389 527 Coils Coil 518 527 - -
Arst3g00389 527 NCBIfam sugar porter family MFS transporter 66 521 IPR003663 GO:0016020|GO:0022857|GO:0055085
Arst3g00389 527 PRINTS Sugar transporter signature 339 349 IPR003663 GO:0016020|GO:0022857|GO:0055085
Arst3g00389 527 PRINTS Sugar transporter signature 449 461 IPR003663 GO:0016020|GO:0022857|GO:0055085
Arst3g00389 527 PRINTS Sugar transporter signature 168 187 IPR003663 GO:0016020|GO:0022857|GO:0055085
Arst3g00389 527 PRINTS Sugar transporter signature 426 447 IPR003663 GO:0016020|GO:0022857|GO:0055085
Arst3g00389 527 PRINTS Sugar transporter signature 78 88 IPR003663 GO:0016020|GO:0022857|GO:0055085
Arst3g00389 527 ProSitePatterns Sugar transport proteins signature 2. 173 198 IPR005829 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00389 Arst-Chr3 2770343 2773816 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00389 19 527 Organic Solute Cotransporters AT5G59250 77.237 0.0 776
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00389 - - gmx:100809316 822.002