Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00288 ATGGATCTCATCACTTTACTAACCCTCCTTCCAGCATTGTACTTGTGTTTCCTGATCTGGAACTTGTTCGATCAGAAAAGGGACCAAGAGTGCTACATATTAGACTACCAATGTTACAAACCTTCTGATGATAGAAAGCTAGGGACAGAGTTCTGCGGCAGAGTCATCAAAAGATCCCAATCCTTAGGCCTTGATGAGTACAAGTTCCTCCTCAAAGCCATTGTTAGCTCCGGCATTGGTGAGCAAACTTACGCTCCAAGAAACGTCTTCGACGGCCGCGAATCCAACCCTACCCTTACCGACGGTATTGTGGAAATGGAGGAGTTTTTCAACGATAGCATTGAAAAATTGTTGTTGAGGACAGGTGTAAACCCATCGGAGATTGATGTGTTGGTTGTTAATATTTCAATGCTGGCGGTTCTTCCTTCTTTGTCCTCCAGAATCATCAACAAGTACAAGCTAAGGCATGATATCAAGGTCTACAACCTCACCGGTATGGGGTGTAGTGCTAGTCTTATTTCTTTGGACATTGTAAAGAACATTTTCAAGTCGCAGAGGAATAAGCTAGCACTCTTGGTAACTTCAGAGAGCTTGAGTCCAAATTGGTATTCAGGTAACGAGAGATCAATGATTCTAGCTAACTGCTTGTTTCGCTGCGGCGGTTGCGCGATTTTGCTGACGAACAAGAGGACATTGAAGCACAAATCAATGTTCAAATTGAAGTGTTTGGTGAGAACTCATCATGGAGCTAGAGATGAAGCTTATGGTTGTTGCATTCAAAAGGAAGATGAACAAGGTAGACTTGGTTTTCACCTTGGGAAAACCCTCCCAAAAGCAGCAACAAGAGCTTTCATTGACAATTTGAGGGTAATTTCACCCAAGATTCTTCCAACAAGGGAATTACTAAGATTCTTTGTTGTATACCTAATAAAGAAAATCACAATGTTGGGAAAAAGTAACAATTATAACACTCTCAAGGCTAGTTCTGGAGTTATCACAACGACGAAATCGCCGTTGAATTTTAAGACCGGCGTGGATCATTTCTGTATTCACACCGGAGGTAAAGCCGTTATAGACGGAATAGGAATAAGTTTAGATCTGGCTGAGTATGACCTCGAACCGGCACGGATGACTCTGCACCGGTTCGGGAACACCTCAGCCAGTAGCCTTTGGTATGTTCTAGGGTACATGGAGGCAAAGAAGAGGCTGAGAAAAGGTGAGAGGGTGTTCATGATAAGCTTTGGTGCTGGCTTTAAATGCAATAGCTGTTTGTGGGAAGTGATGAGAGATCTCAAAGGTGATCAAGAAAATGTGTGGGCCGATTGCATTGATAACTACCCACCAAAATCATTGTCTAACCCTTTCATGGAGAAGTATAGTTGGATCAATGATGTTGAGGATGAAAGCACCGCTGAGATCCCTGATTTTCTCAAGTAA 1437 0.428 MDLITLLTLLPALYLCFLIWNLFDQKRDQECYILDYQCYKPSDDRKLGTEFCGRVIKRSQSLGLDEYKFLLKAIVSSGIGEQTYAPRNVFDGRESNPTLTDGIVEMEEFFNDSIEKLLLRTGVNPSEIDVLVVNISMLAVLPSLSSRIINKYKLRHDIKVYNLTGMGCSASLISLDIVKNIFKSQRNKLALLVTSESLSPNWYSGNERSMILANCLFRCGGCAILLTNKRTLKHKSMFKLKCLVRTHHGARDEAYGCCIQKEDEQGRLGFHLGKTLPKAATRAFIDNLRVISPKILPTRELLRFFVVYLIKKITMLGKSNNYNTLKASSGVITTTKSPLNFKTGVDHFCIHTGGKAVIDGIGISLDLAEYDLEPARMTLHRFGNTSASSLWYVLGYMEAKKRLRKGERVFMISFGAGFKCNSCLWEVMRDLKGDQENVWADCIDNYPPKSLSNPFMEKYSWINDVEDESTAEIPDFLK 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00288 478 CDD CHS_like 19 425 - -
Arst3g00288 478 PIRSF Very_long_ch_3-ktacl-CoA_syn 1 461 IPR012392 GO:0006633|GO:0016020|GO:0016747
Arst3g00288 478 Pfam FAE1/Type III polyketide synthase-like protein 25 312 IPR013601 GO:0006633|GO:0016020|GO:0016747
Arst3g00288 478 Gene3D - 71 427 IPR016039 GO:0016746
Arst3g00288 478 SUPERFAMILY Thiolase-like 17 231 IPR016039 GO:0016746
Arst3g00288 478 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 345 426 IPR013747 -
Arst3g00288 478 SUPERFAMILY Thiolase-like 243 428 IPR016039 GO:0016746
Arst3g00288 478 PANTHER 3-KETOACYL-COA SYNTHASE 15 448 IPR012392 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00288 Arst-Chr3 2167222 2169240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00288 19 475 Acyl Lipid Metabolism Gene Families AT2G28630 70.282 0.0 678
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00288 K15397 - gmx:100809149 750.355
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01768 8 26011404 26013050 Arst3g00288 3 2167222 2169240 PCT